RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 FAM236BA0A1B0GV22 79 aa5.99□□□□□ -1.45
CLIP2-209ENST00000493166 A8MUN3 132 aa5.97□□□□□ -1.45
CLIP2-209ENST00000493166 LCE2BO14633 110 aa5.96□□□□□ -1.46
CLIP2-209ENST00000493166 SMIM20Q8N5G0 67 aa5.96□□□□□ -1.46
CLIP2-209ENST00000493166 KRTAP3-3Q9BYR6 98 aa5.95□□□□□ -1.46
CLIP2-209ENST00000493166 TRAV7A0A075B6U4 112 aa5.94□□□□□ -1.46
CLIP2-209ENST00000493166 NDUFC1O43677 76 aa5.91□□□□□ -1.46
CLIP2-209ENST00000493166 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.85□□□□□ -1.47
CLIP2-209ENST00000493166 DMAC1Q96GE9 116 aa5.85□□□□□ -1.47
CLIP2-209ENST00000493166 FCGBPQ9Y6R7 5405 aaPredicted RBP5.84□□□□□ -1.47
CLIP2-209ENST00000493166 KRTAP19-1Q8IUB9 90 aa5.8□□□□□ -1.48
CLIP2-209ENST00000493166 SERP2Q8N6R1 65 aa5.8□□□□□ -1.48
CLIP2-209ENST00000493166 SNURFQ9Y675 71 aa5.8□□□□□ -1.48
CLIP2-209ENST00000493166 KRTAP9-7A8MTY7 169 aa5.79□□□□□ -1.48
CLIP2-209ENST00000493166 H0YAA0 97 aa5.79□□□□□ -1.48
CLIP2-209ENST00000493166 C20orf197Q8N268 126 aa5.77□□□□□ -1.49
CLIP2-209ENST00000493166 ACYP2P14621 99 aa5.76□□□□□ -1.49
CLIP2-209ENST00000493166 SPRR2GQ9BYE4 73 aa5.76□□□□□ -1.49
CLIP2-209ENST00000493166 ADM2Q7Z4H4 148 aa5.75□□□□□ -1.49
CLIP2-209ENST00000493166 CRIPTQ9P021 101 aa5.75□□□□□ -1.49
CLIP2-209ENST00000493166 KRTAP19-6Q3LI70 58 aa5.73□□□□□ -1.49
CLIP2-209ENST00000493166 MACF1Q9UPN3 7388 aaKnown RBP5.73□□□□□ -1.49
CLIP2-209ENST00000493166 Q5VV11 94 aa5.71□□□□□ -1.5
CLIP2-209ENST00000493166 SYNE2Q8WXH0 6885 aaKnown RBP5.69□□□□□ -1.5
CLIP2-209ENST00000493166 KRTAP19-8Q3LI54 63 aa5.69□□□□□ -1.5
CLIP2-209ENST00000493166 SPANXA2-OT1Q8N9U9 137 aa5.69□□□□□ -1.5
CLIP2-209ENST00000493166 CHKB-CPT1BH3BT56 60 aa5.67□□□□□ -1.5
CLIP2-209ENST00000493166 COX7CP15954 63 aa5.67□□□□□ -1.5
CLIP2-209ENST00000493166 SPTSSBQ8NFR3 76 aa5.67□□□□□ -1.5
CLIP2-209ENST00000493166 MT1BP07438 61 aa5.66□□□□□ -1.5
CLIP2-209ENST00000493166 P0C880 135 aa5.62□□□□□ -1.51
CLIP2-209ENST00000493166 R4GN34 69 aa5.6□□□□□ -1.51
CLIP2-209ENST00000493166 KRTAP3-2Q9BYR7 98 aa5.59□□□□□ -1.51
CLIP2-209ENST00000493166 ANAPC13Q9BS18 74 aa5.58□□□□□ -1.52
CLIP2-209ENST00000493166 A6NN06 94 aa5.56□□□□□ -1.52
CLIP2-209ENST00000493166 M0QZ58 72 aa5.56□□□□□ -1.52
CLIP2-209ENST00000493166 CYSTM1Q9H1C7 97 aa5.55□□□□□ -1.52
CLIP2-209ENST00000493166 H7BZZ5 65 aa5.54□□□□□ -1.52
CLIP2-209ENST00000493166 COA5Q86WW8 74 aa5.53□□□□□ -1.52
CLIP2-209ENST00000493166 KRTAP10-5P60370 271 aa5.5□□□□□ -1.53
CLIP2-209ENST00000493166 PLAC4Q8WY50 150 aa5.48□□□□□ -1.53
CLIP2-209ENST00000493166 LINC01554Q52M75 96 aa5.47□□□□□ -1.53
CLIP2-209ENST00000493166 CCDC179H3BU77 68 aa5.45□□□□□ -1.54
CLIP2-209ENST00000493166 KRTAP6-3Q3LI67 103 aa5.4□□□□□ -1.54
CLIP2-209ENST00000493166 PRO2289Q9P1D8 64 aa5.4□□□□□ -1.54
CLIP2-209ENST00000493166 SEC61GP60059 68 aa5.39□□□□□ -1.55
CLIP2-209ENST00000493166 NEBP20929 6669 aa5.37□□□□□ -1.55
CLIP2-209ENST00000493166 SERP1Q9Y6X1 66 aa5.37□□□□□ -1.55
CLIP2-209ENST00000493166 MT1XP80297 61 aa5.36□□□□□ -1.55
CLIP2-209ENST00000493166 ATP5EP56381 51 aaPredicted RBP5.35□□□□□ -1.55
CLIP2-209ENST00000493166 KRTAP13-4Q3LI77 160 aa5.32□□□□□ -1.56
CLIP2-209ENST00000493166 MUC12Q9UKN1 5478 aa5.3□□□□□ -1.56
CLIP2-209ENST00000493166 TMEM258P61165 79 aa5.27□□□□□ -1.57
CLIP2-209ENST00000493166 A0A1B0GU33 70 aa5.26□□□□□ -1.57
CLIP2-209ENST00000493166 A0A1B0GU69 56 aa5.26□□□□□ -1.57
CLIP2-209ENST00000493166 SPATA8Q6RVD6 105 aa5.22□□□□□ -1.57
CLIP2-209ENST00000493166 A0A0D9SG42 100 aa5.21□□□□□ -1.58
CLIP2-209ENST00000493166 KRTAP12-2P59991 146 aa5.2□□□□□ -1.58
CLIP2-209ENST00000493166 KMT2DO14686 5537 aa5.19□□□□□ -1.58
CLIP2-209ENST00000493166 CAMK2N1Q7Z7J9 78 aa5.18□□□□□ -1.58
CLIP2-209ENST00000493166 PRR15LQ9BU68 103 aa5.16□□□□□ -1.58
CLIP2-209ENST00000493166 KRTAP5-9P26371 169 aa5.15□□□□□ -1.59
CLIP2-209ENST00000493166 MDN1Q9NU22 5596 aa5.13□□□□□ -1.59
CLIP2-209ENST00000493166 SPINT4Q6UDR6 99 aa5.13□□□□□ -1.59
CLIP2-209ENST00000493166 LINC01558Q9Y6Z2 57 aa5.13□□□□□ -1.59
CLIP2-209ENST00000493166 SMIM26A0A096LP01 95 aa5.12□□□□□ -1.59
CLIP2-209ENST00000493166 KRTAP10-7P60409 375 aaPredicted RBP5.12□□□□□ -1.59
CLIP2-209ENST00000493166 KRTAP8-1Q8IUC2 63 aa5.11□□□□□ -1.59
CLIP2-209ENST00000493166 KRTAP12-1P59990 96 aa5.09□□□□□ -1.59
CLIP2-209ENST00000493166 KRTAP10-12P60413 245 aa5.09□□□□□ -1.59
CLIP2-209ENST00000493166 PCP4P48539 62 aa5.08□□□□□ -1.6
CLIP2-209ENST00000493166 KRTAP4-8A0A0G2JLE6 195 aa5.07□□□□□ -1.6
CLIP2-209ENST00000493166 A8MU10 97 aa5.07□□□□□ -1.6
CLIP2-209ENST00000493166 KRTAP20-1Q3LI63 56 aa5.07□□□□□ -1.6
CLIP2-209ENST00000493166 SPRR2FQ96RM1 72 aa5.07□□□□□ -1.6
CLIP2-209ENST00000493166 KRTAP4-8Q9BYQ9 185 aa5.07□□□□□ -1.6
CLIP2-209ENST00000493166 UQCR11O14957 56 aa4.98□□□□□ -1.61
CLIP2-209ENST00000493166 V9GYY9 64 aa4.96□□□□□ -1.62
CLIP2-209ENST00000493166 SPRR2EP22531 72 aa4.95□□□□□ -1.62
CLIP2-209ENST00000493166 SPRR2BP35325 72 aa4.95□□□□□ -1.62
CLIP2-209ENST00000493166 SPRR2AP35326 72 aa4.95□□□□□ -1.62
CLIP2-209ENST00000493166 Q1T7F1 81 aa4.91□□□□□ -1.62
CLIP2-209ENST00000493166 PSPHP1O15172 72 aa4.9□□□□□ -1.63
CLIP2-209ENST00000493166 MIR22HGQ0VDD5 57 aa4.89□□□□□ -1.63
CLIP2-209ENST00000493166 LCE1AQ5T7P2 110 aa4.89□□□□□ -1.63
CLIP2-209ENST00000493166 KRTAP2-3P0C7H8 128 aa4.88□□□□□ -1.63
CLIP2-209ENST00000493166 KRTAP2-4Q9BYR9 128 aa4.88□□□□□ -1.63
CLIP2-209ENST00000493166 C10orf95Q9H7T3 257 aa4.84□□□□□ -1.63
CLIP2-209ENST00000493166 TNP1P09430 55 aa4.82□□□□□ -1.64
CLIP2-209ENST00000493166 RPS28P62857 69 aaKnown RBP4.81□□□□□ -1.64
CLIP2-209ENST00000493166 K7ERS5 55 aa4.78□□□□□ -1.64
CLIP2-209ENST00000493166 SPRR2DP22532 72 aa4.78□□□□□ -1.64
CLIP2-209ENST00000493166 KRTAP19-7Q3SYF9 63 aa4.78□□□□□ -1.64
CLIP2-209ENST00000493166 A6NED7 52 aa4.76□□□□□ -1.65
CLIP2-209ENST00000493166 MT1EP04732 61 aa4.74□□□□□ -1.65
CLIP2-209ENST00000493166 KRTAP2-2Q9BYT5 123 aa4.73□□□□□ -1.65
CLIP2-209ENST00000493166 KRTAP2-1Q9BYU5 128 aa4.73□□□□□ -1.65
CLIP2-209ENST00000493166 KRTAP19-5Q3LI72 72 aa4.72□□□□□ -1.65
CLIP2-209ENST00000493166 LCE3AQ5TA76 89 aa4.72□□□□□ -1.65
CLIP2-209ENST00000493166 KRTAP19-3Q7Z4W3 81 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms