RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 DEFB116Q30KQ4 102 aa5.22□□□□□ -1.57
CSTF1-206ENST00000493039 IGLV7-46A0A075B6I9 117 aa5.19□□□□□ -1.58
CSTF1-206ENST00000493039 KRTAP25-1Q3LHN0 102 aa5.19□□□□□ -1.58
CSTF1-206ENST00000493039 NDUFAF8A1L188 74 aa5.18□□□□□ -1.58
CSTF1-206ENST00000493039 H0Y9P7 68 aa5.18□□□□□ -1.58
CSTF1-206ENST00000493039 KRTAP13-3Q3SY46 172 aa5.16□□□□□ -1.58
CSTF1-206ENST00000493039 COA5Q86WW8 74 aa5.16□□□□□ -1.58
CSTF1-206ENST00000493039 DSCR10P59022 87 aa5.15□□□□□ -1.59
CSTF1-206ENST00000493039 TPRXLQ17RH7 258 aa5.14□□□□□ -1.59
CSTF1-206ENST00000493039 UBR4Q5T4S7 5183 aa5.14□□□□□ -1.59
CSTF1-206ENST00000493039 SPATA8Q6RVD6 105 aa5.13□□□□□ -1.59
CSTF1-206ENST00000493039 C9orf92A6NGG3 77 aa5.12□□□□□ -1.59
CSTF1-206ENST00000493039 A8MUU9 505 aa5.11□□□□□ -1.59
CSTF1-206ENST00000493039 Q8N9L7 120 aa5.11□□□□□ -1.59
CSTF1-206ENST00000493039 A0A1B0GVX0 72 aa5.1□□□□□ -1.59
CSTF1-206ENST00000493039 K7EQZ3 153 aa5.1□□□□□ -1.59
CSTF1-206ENST00000493039 H3BPC8 53 aa5.08□□□□□ -1.6
CSTF1-206ENST00000493039 XP32Q5T750 250 aa5.08□□□□□ -1.6
CSTF1-206ENST00000493039 MUC2Q02817 5179 aa5.06□□□□□ -1.6
CSTF1-206ENST00000493039 DMAC1Q96GE9 116 aa5.05□□□□□ -1.6
CSTF1-206ENST00000493039 MUC17Q685J3 4493 aa5.05□□□□□ -1.6
CSTF1-206ENST00000493039 RNF213Q63HN8 5207 aa5.05□□□□□ -1.6
CSTF1-206ENST00000493039 MMP24-AS1A0A0U1RRL7 71 aa5.04□□□□□ -1.6
CSTF1-206ENST00000493039 CAMK2N1Q7Z7J9 78 aa5.04□□□□□ -1.6
CSTF1-206ENST00000493039 UQCR11O14957 56 aa5.03□□□□□ -1.6
CSTF1-206ENST00000493039 LCE2BO14633 110 aa5□□□□□ -1.61
CSTF1-206ENST00000493039 RPL37P61927 97 aaKnown RBP5□□□□□ -1.61
CSTF1-206ENST00000493039 Q5W150 140 aa5□□□□□ -1.61
CSTF1-206ENST00000493039 KRTAP15-1Q3LI76 137 aa4.99□□□□□ -1.61
CSTF1-206ENST00000493039 WFDC13Q8IUB5 93 aa4.99□□□□□ -1.61
CSTF1-206ENST00000493039 MRPL34Q9BQ48 92 aaKnown RBP4.97□□□□□ -1.61
CSTF1-206ENST00000493039 PCOTHQ58A44 107 aa4.96□□□□□ -1.62
CSTF1-206ENST00000493039 KRTAP4-1Q9BYQ7 146 aa4.96□□□□□ -1.62
CSTF1-206ENST00000493039 KRTAP23-1A1A580 65 aa4.92□□□□□ -1.62
CSTF1-206ENST00000493039 KRTAP4-8Q9BYQ9 185 aa4.92□□□□□ -1.62
CSTF1-206ENST00000493039 LCE2AQ5TA79 106 aaPredicted RBP4.91□□□□□ -1.62
CSTF1-206ENST00000493039 SPINT4Q6UDR6 99 aa4.91□□□□□ -1.62
CSTF1-206ENST00000493039 A0A1B0GU69 56 aa4.89□□□□□ -1.63
CSTF1-206ENST00000493039 HRES1P13985 223 aa4.88□□□□□ -1.63
CSTF1-206ENST00000493039 FAT4Q6V0I7 4981 aa4.85□□□□□ -1.63
CSTF1-206ENST00000493039 TP53AIP1Q9HCN2 124 aa4.84□□□□□ -1.63
CSTF1-206ENST00000493039 KRTAP19-2Q3LHN2 52 aa4.81□□□□□ -1.64
CSTF1-206ENST00000493039 KRTAP9-2Q9BYQ4 174 aa4.78□□□□□ -1.64
CSTF1-206ENST00000493039 IGKV2D-30A0A075B6S6 120 aa4.77□□□□□ -1.65
CSTF1-206ENST00000493039 A0A1B0GU33 70 aa4.77□□□□□ -1.65
CSTF1-206ENST00000493039 IGKV2-30P06310 120 aa4.77□□□□□ -1.65
CSTF1-206ENST00000493039 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.77□□□□□ -1.65
CSTF1-206ENST00000493039 LCE2CQ5TA81 110 aa4.77□□□□□ -1.65
CSTF1-206ENST00000493039 KRTAP9-6A0A140TA67 174 aa4.76□□□□□ -1.65
CSTF1-206ENST00000493039 FLGP20930 4061 aaPredicted RBP4.74□□□□□ -1.65
CSTF1-206ENST00000493039 KRTAP3-1Q9BYR8 98 aa4.68□□□□□ -1.66
CSTF1-206ENST00000493039 LCE3BQ5TA77 95 aa4.66□□□□□ -1.66
CSTF1-206ENST00000493039 ACYP2P14621 99 aa4.66□□□□□ -1.66
CSTF1-206ENST00000493039 MT1HP80294 61 aa4.65□□□□□ -1.67
CSTF1-206ENST00000493039 COX6B2Q6YFQ2 88 aa4.65□□□□□ -1.67
CSTF1-206ENST00000493039 KRTAP4-8A0A0G2JLE6 195 aa4.64□□□□□ -1.67
CSTF1-206ENST00000493039 CRIPTQ9P021 101 aa4.62□□□□□ -1.67
CSTF1-206ENST00000493039 H1FX-AS1Q4G0G2 97 aa4.6□□□□□ -1.67
CSTF1-206ENST00000493039 PRO2289Q9P1D8 64 aa4.59□□□□□ -1.67
CSTF1-206ENST00000493039 KRTAP9-9Q9BYP9 154 aa4.53□□□□□ -1.68
CSTF1-206ENST00000493039 KRTAP9-4Q9BYQ2 154 aa4.53□□□□□ -1.68
CSTF1-206ENST00000493039 KRTAP4-7Q9BYR0 210 aa4.53□□□□□ -1.68
CSTF1-206ENST00000493039 M0R2T5 61 aa4.51□□□□□ -1.69
CSTF1-206ENST00000493039 R4GN34 69 aa4.51□□□□□ -1.69
CSTF1-206ENST00000493039 H0YAA0 97 aa4.5□□□□□ -1.69
CSTF1-206ENST00000493039 LORP23490 312 aaPredicted RBP4.5□□□□□ -1.69
CSTF1-206ENST00000493039 KRTAP10-6P60371 365 aaPredicted RBP4.5□□□□□ -1.69
CSTF1-206ENST00000493039 S4R3F8 94 aa4.49□□□□□ -1.69
CSTF1-206ENST00000493039 KRTAP4-12Q9BQ66 201 aa4.48□□□□□ -1.69
CSTF1-206ENST00000493039 KRTAP9-8Q9BYQ0 159 aa4.47□□□□□ -1.69
CSTF1-206ENST00000493039 MT2AP02795 61 aa4.42□□□□□ -1.7
CSTF1-206ENST00000493039 MT1FP04733 61 aa4.4□□□□□ -1.71
CSTF1-206ENST00000493039 LCE1DQ5T752 114 aa4.38□□□□□ -1.71
CSTF1-206ENST00000493039 PLAC4Q8WY50 150 aa4.35□□□□□ -1.71
CSTF1-206ENST00000493039 C10orf95Q9H7T3 257 aa4.34□□□□□ -1.72
CSTF1-206ENST00000493039 KRTAP10-10P60014 251 aa4.33□□□□□ -1.72
CSTF1-206ENST00000493039 KRTAP4-9Q9BYQ8 210 aa4.32□□□□□ -1.72
CSTF1-206ENST00000493039 KRTAP9-3Q9BYQ3 159 aa4.31□□□□□ -1.72
CSTF1-206ENST00000493039 KRTAP4-2Q9BYR5 136 aa4.28□□□□□ -1.72
CSTF1-206ENST00000493039 FSIP2Q5CZC0 6907 aa4.26□□□□□ -1.73
CSTF1-206ENST00000493039 USH2AO75445 5202 aa4.26□□□□□ -1.73
CSTF1-206ENST00000493039 INE1O15225 51 aa4.25□□□□□ -1.73
CSTF1-206ENST00000493039 KRTAP19-1Q8IUB9 90 aa4.25□□□□□ -1.73
CSTF1-206ENST00000493039 KRTAP5-3Q6L8H2 238 aa4.21□□□□□ -1.74
CSTF1-206ENST00000493039 SPRR2GQ9BYE4 73 aa4.21□□□□□ -1.74
CSTF1-206ENST00000493039 SSPOA2VEC9 5147 aa4.16□□□□□ -1.74
CSTF1-206ENST00000493039 KRTAP19-8Q3LI54 63 aa4.13□□□□□ -1.75
CSTF1-206ENST00000493039 KRTAP13-4Q3LI77 160 aa4.13□□□□□ -1.75
CSTF1-206ENST00000493039 M0QZ58 72 aa4.12□□□□□ -1.75
CSTF1-206ENST00000493039 MT1BP07438 61 aa4.12□□□□□ -1.75
CSTF1-206ENST00000493039 KRTAP12-2P59991 146 aa4.09□□□□□ -1.76
CSTF1-206ENST00000493039 KRTAP4-11Q9BYQ6 195 aa4.05□□□□□ -1.76
CSTF1-206ENST00000493039 CRCT1Q9UGL9 99 aa4.03□□□□□ -1.76
CSTF1-206ENST00000493039 FCGBPQ9Y6R7 5405 aaPredicted RBP4.01□□□□□ -1.77
CSTF1-206ENST00000493039 KRTAP19-6Q3LI70 58 aa4□□□□□ -1.77
CSTF1-206ENST00000493039 A0A0D9SG42 100 aa3.98□□□□□ -1.77
CSTF1-206ENST00000493039 KRTAP12-1P59990 96 aa3.94□□□□□ -1.78
CSTF1-206ENST00000493039 MT1XP80297 61 aa3.93□□□□□ -1.78
CSTF1-206ENST00000493039 KRTAP10-5P60370 271 aa3.93□□□□□ -1.78
CSTF1-206ENST00000493039 PP632Q6XCG6 107 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms