RNA–Protein interactions for RNA: ENST00000492672.5

COPS3-210, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 4

Gene COPS3, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-210ENST00000492672 LOC100996750A0A140TA64 210 aa7.52□□□□□ -1.21
COPS3-210ENST00000492672 KRTAP4-6Q9BYQ5 205 aa7.52□□□□□ -1.21
COPS3-210ENST00000492672 KRTAP10-10P60014 251 aa7.48□□□□□ -1.21
COPS3-210ENST00000492672 C20orf197Q8N268 126 aa7.48□□□□□ -1.21
COPS3-210ENST00000492672 CSAG1Q6PB30 78 aa7.44□□□□□ -1.22
COPS3-210ENST00000492672 A8MUN3 132 aa7.43□□□□□ -1.22
COPS3-210ENST00000492672 DMAC1Q96GE9 116 aa7.42□□□□□ -1.22
COPS3-210ENST00000492672 KRTAP9-3Q9BYQ3 159 aa7.42□□□□□ -1.22
COPS3-210ENST00000492672 COX7CP15954 63 aa7.4□□□□□ -1.22
COPS3-210ENST00000492672 CYSTM1Q9H1C7 97 aa7.37□□□□□ -1.23
COPS3-210ENST00000492672 NDUFC1O43677 76 aa7.35□□□□□ -1.23
COPS3-210ENST00000492672 ANAPC13Q9BS18 74 aa7.32□□□□□ -1.24
COPS3-210ENST00000492672 ACYP2P14621 99 aa7.28□□□□□ -1.24
COPS3-210ENST00000492672 SPANXA2-OT1Q8N9U9 137 aa7.27□□□□□ -1.25
COPS3-210ENST00000492672 CCDC179H3BU77 68 aa7.26□□□□□ -1.25
COPS3-210ENST00000492672 USH2AO75445 5202 aa7.25□□□□□ -1.25
COPS3-210ENST00000492672 H7BZZ5 65 aa7.24□□□□□ -1.25
COPS3-210ENST00000492672 KRTAP19-1Q8IUB9 90 aa7.22□□□□□ -1.25
COPS3-210ENST00000492672 FSIP2Q5CZC0 6907 aa7.21□□□□□ -1.25
COPS3-210ENST00000492672 CRCT1Q9UGL9 99 aa7.21□□□□□ -1.26
COPS3-210ENST00000492672 ADM2Q7Z4H4 148 aa7.2□□□□□ -1.26
COPS3-210ENST00000492672 KRTAP9-6A0A140TA67 174 aa7.18□□□□□ -1.26
COPS3-210ENST00000492672 H0YAA0 97 aa7.17□□□□□ -1.26
COPS3-210ENST00000492672 CHKB-CPT1BH3BT56 60 aa7.14□□□□□ -1.27
COPS3-210ENST00000492672 P0C880 135 aa7.13□□□□□ -1.27
COPS3-210ENST00000492672 SSPOA2VEC9 5147 aa7.12□□□□□ -1.27
COPS3-210ENST00000492672 COA5Q86WW8 74 aa7.12□□□□□ -1.27
COPS3-210ENST00000492672 SPRR2GQ9BYE4 73 aa7.11□□□□□ -1.27
COPS3-210ENST00000492672 SPTSSBQ8NFR3 76 aa7.05□□□□□ -1.28
COPS3-210ENST00000492672 MT1BP07438 61 aa7.04□□□□□ -1.28
COPS3-210ENST00000492672 KRTAP19-8Q3LI54 63 aa7.03□□□□□ -1.28
COPS3-210ENST00000492672 CRIPTQ9P021 101 aa7.03□□□□□ -1.28
COPS3-210ENST00000492672 KRTAP4-8Q9BYQ9 185 aa6.97□□□□□ -1.29
COPS3-210ENST00000492672 KRTAP19-6Q3LI70 58 aa6.95□□□□□ -1.3
COPS3-210ENST00000492672 Q5VV11 94 aa6.95□□□□□ -1.3
COPS3-210ENST00000492672 M0QZ58 72 aa6.92□□□□□ -1.3
COPS3-210ENST00000492672 R4GN34 69 aa6.92□□□□□ -1.3
COPS3-210ENST00000492672 FCGBPQ9Y6R7 5405 aaPredicted RBP6.89□□□□□ -1.31
COPS3-210ENST00000492672 ATP5EP56381 51 aaPredicted RBP6.87□□□□□ -1.31
COPS3-210ENST00000492672 TMEM258P61165 79 aa6.87□□□□□ -1.31
COPS3-210ENST00000492672 H3BS24 57 aa6.86□□□□□ -1.31
COPS3-210ENST00000492672 KRTAP13-4Q3LI77 160 aa6.84□□□□□ -1.31
COPS3-210ENST00000492672 LINC01554Q52M75 96 aa6.84□□□□□ -1.31
COPS3-210ENST00000492672 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.81□□□□□ -1.32
COPS3-210ENST00000492672 KRTAP4-12Q9BQ66 201 aa6.78□□□□□ -1.32
COPS3-210ENST00000492672 PCP4P48539 62 aa6.76□□□□□ -1.33
COPS3-210ENST00000492672 SERP1Q9Y6X1 66 aa6.76□□□□□ -1.33
COPS3-210ENST00000492672 KRTAP10-5P60370 271 aa6.75□□□□□ -1.33
COPS3-210ENST00000492672 A6NN06 94 aa6.74□□□□□ -1.33
COPS3-210ENST00000492672 SEC61GP60059 68 aa6.74□□□□□ -1.33
COPS3-210ENST00000492672 PLAC4Q8WY50 150 aa6.72□□□□□ -1.33
COPS3-210ENST00000492672 SPATA8Q6RVD6 105 aa6.7□□□□□ -1.34
COPS3-210ENST00000492672 A0A1B0GU69 56 aa6.69□□□□□ -1.34
COPS3-210ENST00000492672 A0A1B0GU33 70 aa6.68□□□□□ -1.34
COPS3-210ENST00000492672 MT1XP80297 61 aa6.68□□□□□ -1.34
COPS3-210ENST00000492672 LINC01558Q9Y6Z2 57 aa6.65□□□□□ -1.34
COPS3-210ENST00000492672 LCE3BQ5TA77 95 aa6.64□□□□□ -1.35
COPS3-210ENST00000492672 A0A0D9SG42 100 aa6.62□□□□□ -1.35
COPS3-210ENST00000492672 A8MU10 97 aa6.54□□□□□ -1.36
COPS3-210ENST00000492672 MACF1Q9UPN3 7388 aaKnown RBP6.53□□□□□ -1.36
COPS3-210ENST00000492672 PRR15LQ9BU68 103 aa6.53□□□□□ -1.36
COPS3-210ENST00000492672 PRO2289Q9P1D8 64 aa6.52□□□□□ -1.37
COPS3-210ENST00000492672 KRTAP9-7A8MTY7 169 aa6.5□□□□□ -1.37
COPS3-210ENST00000492672 KRTAP9-9Q9BYP9 154 aa6.5□□□□□ -1.37
COPS3-210ENST00000492672 KRTAP9-4Q9BYQ2 154 aa6.5□□□□□ -1.37
COPS3-210ENST00000492672 KRTAP12-1P59990 96 aa6.49□□□□□ -1.37
COPS3-210ENST00000492672 SPINT4Q6UDR6 99 aa6.47□□□□□ -1.37
COPS3-210ENST00000492672 KRTAP12-2P59991 146 aa6.46□□□□□ -1.38
COPS3-210ENST00000492672 SMIM26A0A096LP01 95 aa6.43□□□□□ -1.38
COPS3-210ENST00000492672 PSPHP1O15172 72 aa6.43□□□□□ -1.38
COPS3-210ENST00000492672 Q1T7F1 81 aa6.43□□□□□ -1.38
COPS3-210ENST00000492672 SYNE2Q8WXH0 6885 aaKnown RBP6.42□□□□□ -1.38
COPS3-210ENST00000492672 CAMK2N1Q7Z7J9 78 aa6.42□□□□□ -1.38
COPS3-210ENST00000492672 KRTAP10-7P60409 375 aaPredicted RBP6.4□□□□□ -1.38
COPS3-210ENST00000492672 RPS28P62857 69 aaKnown RBP6.4□□□□□ -1.38
COPS3-210ENST00000492672 KRTAP19-4Q3LI73 84 aa6.4□□□□□ -1.38
COPS3-210ENST00000492672 V9GYY9 64 aa6.37□□□□□ -1.39
COPS3-210ENST00000492672 KMT2DO14686 5537 aa6.37□□□□□ -1.39
COPS3-210ENST00000492672 KRTAP4-8A0A0G2JLE6 195 aa6.36□□□□□ -1.39
COPS3-210ENST00000492672 UQCR11O14957 56 aa6.36□□□□□ -1.39
COPS3-210ENST00000492672 KRTAP6-3Q3LI67 103 aa6.35□□□□□ -1.39
COPS3-210ENST00000492672 KRTAP10-12P60413 245 aa6.31□□□□□ -1.4
COPS3-210ENST00000492672 MIR22HGQ0VDD5 57 aa6.28□□□□□ -1.4
COPS3-210ENST00000492672 LCE1DQ5T752 114 aa6.24□□□□□ -1.41
COPS3-210ENST00000492672 LCE4AQ5TA78 99 aa6.22□□□□□ -1.41
COPS3-210ENST00000492672 KRTAP5-9P26371 169 aa6.21□□□□□ -1.42
COPS3-210ENST00000492672 C10orf95Q9H7T3 257 aa6.21□□□□□ -1.42
COPS3-210ENST00000492672 KRTAP8-1Q8IUC2 63 aa6.2□□□□□ -1.42
COPS3-210ENST00000492672 A6NED7 52 aa6.17□□□□□ -1.42
COPS3-210ENST00000492672 SPRR2FQ96RM1 72 aa6.14□□□□□ -1.43
COPS3-210ENST00000492672 KRTAP4-7Q9BYR0 210 aa6.13□□□□□ -1.43
COPS3-210ENST00000492672 MUC12Q9UKN1 5478 aa6.12□□□□□ -1.43
COPS3-210ENST00000492672 KRTAP4-9Q9BYQ8 210 aa6.03□□□□□ -1.44
COPS3-210ENST00000492672 TNP1P09430 55 aa6□□□□□ -1.45
COPS3-210ENST00000492672 K7ERS5 55 aa5.99□□□□□ -1.45
COPS3-210ENST00000492672 NEBP20929 6669 aa5.98□□□□□ -1.45
COPS3-210ENST00000492672 KRTAP19-7Q3SYF9 63 aa5.97□□□□□ -1.45
COPS3-210ENST00000492672 MDN1Q9NU22 5596 aa5.96□□□□□ -1.45
COPS3-210ENST00000492672 SPRR2EP22531 72 aa5.96□□□□□ -1.46
COPS3-210ENST00000492672 SPRR2BP35325 72 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms