RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-223ENST00000492275 FAM236AA0A1B0GUQ0 79 aa11.94□□□□□ -0.5
TTC3-223ENST00000492275 FAM236BA0A1B0GV22 79 aa11.94□□□□□ -0.5
TTC3-223ENST00000492275 A8MUN3 132 aa11.91□□□□□ -0.5
TTC3-223ENST00000492275 SSPOA2VEC9 5147 aa11.89□□□□□ -0.51
TTC3-223ENST00000492275 TRAV7A0A075B6U4 112 aa11.86□□□□□ -0.51
TTC3-223ENST00000492275 SMIM20Q8N5G0 67 aa11.86□□□□□ -0.51
TTC3-223ENST00000492275 NDUFC1O43677 76 aa11.8□□□□□ -0.52
TTC3-223ENST00000492275 KRTAP19-1Q8IUB9 90 aa11.75□□□□□ -0.53
TTC3-223ENST00000492275 DMAC1Q96GE9 116 aa11.73□□□□□ -0.53
TTC3-223ENST00000492275 SPRR2GQ9BYE4 73 aa11.63□□□□□ -0.55
TTC3-223ENST00000492275 H0YAA0 97 aa11.62□□□□□ -0.55
TTC3-223ENST00000492275 KRTAP19-6Q3LI70 58 aa11.6□□□□□ -0.55
TTC3-223ENST00000492275 SNURFQ9Y675 71 aa11.6□□□□□ -0.55
TTC3-223ENST00000492275 SERP2Q8N6R1 65 aa11.58□□□□□ -0.56
TTC3-223ENST00000492275 FCGBPQ9Y6R7 5405 aaPredicted RBP11.57□□□□□ -0.56
TTC3-223ENST00000492275 ADM2Q7Z4H4 148 aa11.52□□□□□ -0.57
TTC3-223ENST00000492275 CRIPTQ9P021 101 aa11.52□□□□□ -0.57
TTC3-223ENST00000492275 KRTAP19-8Q3LI54 63 aa11.51□□□□□ -0.57
TTC3-223ENST00000492275 C20orf197Q8N268 126 aa11.51□□□□□ -0.57
TTC3-223ENST00000492275 ACYP2P14621 99 aa11.5□□□□□ -0.57
TTC3-223ENST00000492275 MT1BP07438 61 aa11.48□□□□□ -0.57
TTC3-223ENST00000492275 Q5VV11 94 aa11.44□□□□□ -0.58
TTC3-223ENST00000492275 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.41□□□□□ -0.58
TTC3-223ENST00000492275 SPANXA2-OT1Q8N9U9 137 aa11.38□□□□□ -0.59
TTC3-223ENST00000492275 P0C880 135 aa11.33□□□□□ -0.6
TTC3-223ENST00000492275 COX7CP15954 63 aa11.33□□□□□ -0.6
TTC3-223ENST00000492275 KRTAP3-2Q9BYR7 98 aa11.32□□□□□ -0.6
TTC3-223ENST00000492275 CHKB-CPT1BH3BT56 60 aa11.25□□□□□ -0.61
TTC3-223ENST00000492275 SPTSSBQ8NFR3 76 aa11.25□□□□□ -0.61
TTC3-223ENST00000492275 A6NN06 94 aa11.16□□□□□ -0.62
TTC3-223ENST00000492275 CYSTM1Q9H1C7 97 aa11.16□□□□□ -0.62
TTC3-223ENST00000492275 R4GN34 69 aa11.16□□□□□ -0.62
TTC3-223ENST00000492275 KRTAP9-7A8MTY7 169 aa11.14□□□□□ -0.63
TTC3-223ENST00000492275 KRTAP10-5P60370 271 aa11.13□□□□□ -0.63
TTC3-223ENST00000492275 M0QZ58 72 aa11.11□□□□□ -0.63
TTC3-223ENST00000492275 H7BZZ5 65 aa11.1□□□□□ -0.63
TTC3-223ENST00000492275 ANAPC13Q9BS18 74 aa11.08□□□□□ -0.64
TTC3-223ENST00000492275 MACF1Q9UPN3 7388 aaKnown RBP11.08□□□□□ -0.64
TTC3-223ENST00000492275 COA5Q86WW8 74 aa11.05□□□□□ -0.64
TTC3-223ENST00000492275 PLAC4Q8WY50 150 aa10.94□□□□□ -0.66
TTC3-223ENST00000492275 LINC01554Q52M75 96 aa10.92□□□□□ -0.66
TTC3-223ENST00000492275 CCDC179H3BU77 68 aa10.9□□□□□ -0.66
TTC3-223ENST00000492275 SYNE2Q8WXH0 6885 aaKnown RBP10.89□□□□□ -0.67
TTC3-223ENST00000492275 MT1XP80297 61 aa10.85□□□□□ -0.67
TTC3-223ENST00000492275 KRTAP6-3Q3LI67 103 aa10.78□□□□□ -0.68
TTC3-223ENST00000492275 PRO2289Q9P1D8 64 aa10.77□□□□□ -0.69
TTC3-223ENST00000492275 KRTAP13-4Q3LI77 160 aa10.75□□□□□ -0.69
TTC3-223ENST00000492275 SEC61GP60059 68 aa10.67□□□□□ -0.7
TTC3-223ENST00000492275 SERP1Q9Y6X1 66 aa10.67□□□□□ -0.7
TTC3-223ENST00000492275 ATP5EP56381 51 aaPredicted RBP10.59□□□□□ -0.71
TTC3-223ENST00000492275 A0A1B0GU33 70 aa10.51□□□□□ -0.73
TTC3-223ENST00000492275 KRTAP12-2P59991 146 aa10.49□□□□□ -0.73
TTC3-223ENST00000492275 SPATA8Q6RVD6 105 aa10.47□□□□□ -0.73
TTC3-223ENST00000492275 A0A1B0GU69 56 aa10.46□□□□□ -0.73
TTC3-223ENST00000492275 TMEM258P61165 79 aa10.46□□□□□ -0.73
TTC3-223ENST00000492275 KRTAP5-9P26371 169 aa10.44□□□□□ -0.74
TTC3-223ENST00000492275 KMT2DO14686 5537 aa10.44□□□□□ -0.74
TTC3-223ENST00000492275 A0A0D9SG42 100 aa10.4□□□□□ -0.74
TTC3-223ENST00000492275 KRTAP10-7P60409 375 aaPredicted RBP10.36□□□□□ -0.75
TTC3-223ENST00000492275 MUC12Q9UKN1 5478 aa10.34□□□□□ -0.75
TTC3-223ENST00000492275 CAMK2N1Q7Z7J9 78 aa10.31□□□□□ -0.76
TTC3-223ENST00000492275 KRTAP10-12P60413 245 aa10.3□□□□□ -0.76
TTC3-223ENST00000492275 KRTAP4-8A0A0G2JLE6 195 aa10.28□□□□□ -0.76
TTC3-223ENST00000492275 KRTAP4-8Q9BYQ9 185 aa10.28□□□□□ -0.76
TTC3-223ENST00000492275 KRTAP8-1Q8IUC2 63 aa10.26□□□□□ -0.77
TTC3-223ENST00000492275 LINC01558Q9Y6Z2 57 aa10.26□□□□□ -0.77
TTC3-223ENST00000492275 KRTAP12-1P59990 96 aa10.24□□□□□ -0.77
TTC3-223ENST00000492275 NEBP20929 6669 aa10.22□□□□□ -0.77
TTC3-223ENST00000492275 SPINT4Q6UDR6 99 aa10.22□□□□□ -0.77
TTC3-223ENST00000492275 PRR15LQ9BU68 103 aa10.21□□□□□ -0.77
TTC3-223ENST00000492275 SPRR2FQ96RM1 72 aa10.19□□□□□ -0.78
TTC3-223ENST00000492275 SMIM26A0A096LP01 95 aa10.18□□□□□ -0.78
TTC3-223ENST00000492275 A8MU10 97 aa10.16□□□□□ -0.78
TTC3-223ENST00000492275 MDN1Q9NU22 5596 aa10.06□□□□□ -0.8
TTC3-223ENST00000492275 SPRR2EP22531 72 aa9.96□□□□□ -0.82
TTC3-223ENST00000492275 SPRR2BP35325 72 aa9.96□□□□□ -0.82
TTC3-223ENST00000492275 SPRR2AP35326 72 aa9.96□□□□□ -0.82
TTC3-223ENST00000492275 UQCR11O14957 56 aa9.91□□□□□ -0.82
TTC3-223ENST00000492275 LCE1AQ5T7P2 110 aa9.91□□□□□ -0.82
TTC3-223ENST00000492275 PCP4P48539 62 aa9.81□□□□□ -0.84
TTC3-223ENST00000492275 Q1T7F1 81 aa9.81□□□□□ -0.84
TTC3-223ENST00000492275 V9GYY9 64 aa9.8□□□□□ -0.84
TTC3-223ENST00000492275 KRTAP20-1Q3LI63 56 aa9.79□□□□□ -0.84
TTC3-223ENST00000492275 C10orf95Q9H7T3 257 aa9.78□□□□□ -0.84
TTC3-223ENST00000492275 PSPHP1O15172 72 aa9.75□□□□□ -0.85
TTC3-223ENST00000492275 MIR22HGQ0VDD5 57 aa9.73□□□□□ -0.85
TTC3-223ENST00000492275 KRTAP19-7Q3SYF9 63 aa9.7□□□□□ -0.86
TTC3-223ENST00000492275 KRTAP2-3P0C7H8 128 aa9.66□□□□□ -0.86
TTC3-223ENST00000492275 KRTAP2-4Q9BYR9 128 aa9.66□□□□□ -0.86
TTC3-223ENST00000492275 TNP1P09430 55 aa9.61□□□□□ -0.87
TTC3-223ENST00000492275 SPRR2DP22532 72 aa9.61□□□□□ -0.87
TTC3-223ENST00000492275 RPS28P62857 69 aaKnown RBP9.61□□□□□ -0.87
TTC3-223ENST00000492275 MT1EP04732 61 aa9.58□□□□□ -0.88
TTC3-223ENST00000492275 KRTAP19-5Q3LI72 72 aa9.54□□□□□ -0.88
TTC3-223ENST00000492275 LCE3AQ5TA76 89 aa9.48□□□□□ -0.89
TTC3-223ENST00000492275 K7ERS5 55 aa9.42□□□□□ -0.9
TTC3-223ENST00000492275 KRTAP19-3Q7Z4W3 81 aa9.42□□□□□ -0.9
TTC3-223ENST00000492275 A6NED7 52 aa9.41□□□□□ -0.9
TTC3-223ENST00000492275 LCE5AQ5TCM9 118 aa9.41□□□□□ -0.9
TTC3-223ENST00000492275 KRTAP2-2Q9BYT5 123 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms