RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 S4R3F8 94 aa6.53□□□□□ -1.36
SNX12-205ENST00000490561 PCP4P48539 62 aa6.51□□□□□ -1.37
SNX12-205ENST00000490561 ATP5EP56381 51 aaPredicted RBP6.51□□□□□ -1.37
SNX12-205ENST00000490561 MT1HP80294 61 aa6.51□□□□□ -1.37
SNX12-205ENST00000490561 M0R2T5 61 aa6.48□□□□□ -1.37
SNX12-205ENST00000490561 TMEM258P61165 79 aa6.48□□□□□ -1.37
SNX12-205ENST00000490561 LCE2AQ5TA79 106 aaPredicted RBP6.45□□□□□ -1.38
SNX12-205ENST00000490561 LCA10Q71F78 164 aa6.44□□□□□ -1.38
SNX12-205ENST00000490561 CHKB-CPT1BH3BT56 60 aa6.43□□□□□ -1.38
SNX12-205ENST00000490561 CSAG1Q6PB30 78 aa6.43□□□□□ -1.38
SNX12-205ENST00000490561 SPTSSBQ8NFR3 76 aa6.41□□□□□ -1.38
SNX12-205ENST00000490561 COA5Q86WW8 74 aa6.38□□□□□ -1.39
SNX12-205ENST00000490561 KRTAP10-6P60371 365 aaPredicted RBP6.33□□□□□ -1.4
SNX12-205ENST00000490561 LORP23490 312 aaPredicted RBP6.29□□□□□ -1.4
SNX12-205ENST00000490561 H0YAA0 97 aa6.27□□□□□ -1.41
SNX12-205ENST00000490561 SERP1Q9Y6X1 66 aa6.27□□□□□ -1.41
SNX12-205ENST00000490561 KRTAP9-2Q9BYQ4 174 aa6.26□□□□□ -1.41
SNX12-205ENST00000490561 KRTAP9-8Q9BYQ0 159 aa6.22□□□□□ -1.41
SNX12-205ENST00000490561 MT2AP02795 61 aa6.19□□□□□ -1.42
SNX12-205ENST00000490561 KRTAP9-6A0A140TA67 174 aa6.17□□□□□ -1.42
SNX12-205ENST00000490561 ADM2Q7Z4H4 148 aa6.17□□□□□ -1.42
SNX12-205ENST00000490561 KRTAP10-10P60014 251 aa6.16□□□□□ -1.42
SNX12-205ENST00000490561 SEC61GP60059 68 aa6.16□□□□□ -1.42
SNX12-205ENST00000490561 RPS28P62857 69 aaKnown RBP6.14□□□□□ -1.43
SNX12-205ENST00000490561 MT1FP04733 61 aa6.13□□□□□ -1.43
SNX12-205ENST00000490561 CRIPTQ9P021 101 aa6.13□□□□□ -1.43
SNX12-205ENST00000490561 V9GYY9 64 aa6.08□□□□□ -1.44
SNX12-205ENST00000490561 SMIM26A0A096LP01 95 aa6.07□□□□□ -1.44
SNX12-205ENST00000490561 PRR15LQ9BU68 103 aa6.07□□□□□ -1.44
SNX12-205ENST00000490561 LINC01558Q9Y6Z2 57 aa6.07□□□□□ -1.44
SNX12-205ENST00000490561 A0A1B0GU69 56 aa6.06□□□□□ -1.44
SNX12-205ENST00000490561 P0C880 135 aa6.06□□□□□ -1.44
SNX12-205ENST00000490561 KRTAP9-3Q9BYQ3 159 aa6.02□□□□□ -1.45
SNX12-205ENST00000490561 R4GN34 69 aa6.01□□□□□ -1.45
SNX12-205ENST00000490561 Q1T7F1 81 aa6□□□□□ -1.45
SNX12-205ENST00000490561 M0QZ58 72 aa5.99□□□□□ -1.45
SNX12-205ENST00000490561 SPRR2GQ9BYE4 73 aa5.98□□□□□ -1.45
SNX12-205ENST00000490561 A0A1B0GU33 70 aa5.95□□□□□ -1.46
SNX12-205ENST00000490561 KRTAP19-1Q8IUB9 90 aa5.93□□□□□ -1.46
SNX12-205ENST00000490561 Q5VV11 94 aa5.91□□□□□ -1.46
SNX12-205ENST00000490561 CRCT1Q9UGL9 99 aa5.91□□□□□ -1.46
SNX12-205ENST00000490561 FSIP2Q5CZC0 6907 aa5.89□□□□□ -1.47
SNX12-205ENST00000490561 LCE2BO14633 110 aa5.88□□□□□ -1.47
SNX12-205ENST00000490561 PSPHP1O15172 72 aa5.86□□□□□ -1.47
SNX12-205ENST00000490561 KRTAP19-8Q3LI54 63 aa5.86□□□□□ -1.47
SNX12-205ENST00000490561 UQCR11O14957 56 aa5.85□□□□□ -1.47
SNX12-205ENST00000490561 KRTAP13-4Q3LI77 160 aa5.83□□□□□ -1.48
SNX12-205ENST00000490561 LINC01554Q52M75 96 aa5.82□□□□□ -1.48
SNX12-205ENST00000490561 A6NN06 94 aa5.81□□□□□ -1.48
SNX12-205ENST00000490561 SPATA8Q6RVD6 105 aa5.8□□□□□ -1.48
SNX12-205ENST00000490561 USH2AO75445 5202 aa5.77□□□□□ -1.49
SNX12-205ENST00000490561 H3BS24 57 aa5.77□□□□□ -1.49
SNX12-205ENST00000490561 PLAC4Q8WY50 150 aa5.77□□□□□ -1.49
SNX12-205ENST00000490561 MT1BP07438 61 aa5.76□□□□□ -1.49
SNX12-205ENST00000490561 A0A0D9SG42 100 aa5.74□□□□□ -1.49
SNX12-205ENST00000490561 MIR22HGQ0VDD5 57 aa5.74□□□□□ -1.49
SNX12-205ENST00000490561 A6NED7 52 aa5.73□□□□□ -1.49
SNX12-205ENST00000490561 A8MU10 97 aa5.67□□□□□ -1.5
SNX12-205ENST00000490561 KRTAP19-6Q3LI70 58 aa5.64□□□□□ -1.51
SNX12-205ENST00000490561 SPINT4Q6UDR6 99 aa5.64□□□□□ -1.51
SNX12-205ENST00000490561 KRTAP12-1P59990 96 aa5.63□□□□□ -1.51
SNX12-205ENST00000490561 SSPOA2VEC9 5147 aa5.61□□□□□ -1.51
SNX12-205ENST00000490561 K7ERS5 55 aa5.61□□□□□ -1.51
SNX12-205ENST00000490561 CDC42SE1Q9NRR8 79 aa5.6□□□□□ -1.51
SNX12-205ENST00000490561 PRO2289Q9P1D8 64 aa5.6□□□□□ -1.51
SNX12-205ENST00000490561 KRTAP12-2P59991 146 aa5.59□□□□□ -1.51
SNX12-205ENST00000490561 CAMK2N1Q7Z7J9 78 aa5.59□□□□□ -1.51
SNX12-205ENST00000490561 KRTAP10-5P60370 271 aa5.56□□□□□ -1.52
SNX12-205ENST00000490561 A0A0A0MQY5 61 aa5.54□□□□□ -1.52
SNX12-205ENST00000490561 MT1XP80297 61 aa5.52□□□□□ -1.53
SNX12-205ENST00000490561 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.51□□□□□ -1.53
SNX12-205ENST00000490561 KRTAP9-7A8MTY7 169 aa5.48□□□□□ -1.53
SNX12-205ENST00000490561 FCGBPQ9Y6R7 5405 aaPredicted RBP5.47□□□□□ -1.53
SNX12-205ENST00000490561 BRK1Q8WUW1 75 aa5.45□□□□□ -1.54
SNX12-205ENST00000490561 C10orf95Q9H7T3 257 aa5.33□□□□□ -1.56
SNX12-205ENST00000490561 TNP1P09430 55 aa5.3□□□□□ -1.56
SNX12-205ENST00000490561 MACF1Q9UPN3 7388 aaKnown RBP5.29□□□□□ -1.56
SNX12-205ENST00000490561 PRO0628Q9UI54 55 aa5.28□□□□□ -1.56
SNX12-205ENST00000490561 SYNE2Q8WXH0 6885 aaKnown RBP5.27□□□□□ -1.57
SNX12-205ENST00000490561 KRTAP10-12P60413 245 aa5.27□□□□□ -1.57
SNX12-205ENST00000490561 ROMO1P60602 79 aa5.27□□□□□ -1.57
SNX12-205ENST00000490561 KRTAP10-7P60409 375 aaPredicted RBP5.26□□□□□ -1.57
SNX12-205ENST00000490561 KRTAP25-1Q3LHN0 102 aa5.25□□□□□ -1.57
SNX12-205ENST00000490561 PMAIP1Q13794 54 aa5.16□□□□□ -1.58
SNX12-205ENST00000490561 KRTAP6-3Q3LI67 103 aa5.14□□□□□ -1.59
SNX12-205ENST00000490561 LOC100996750A0A140TA64 210 aa5.11□□□□□ -1.59
SNX12-205ENST00000490561 KRTAP8-1Q8IUC2 63 aa5.11□□□□□ -1.59
SNX12-205ENST00000490561 KRTAP4-6Q9BYQ5 205 aa5.11□□□□□ -1.59
SNX12-205ENST00000490561 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
SNX12-205ENST00000490561 KRTAP4-8A0A0G2JLE6 195 aa5.08□□□□□ -1.6
SNX12-205ENST00000490561 KRTAP4-8Q9BYQ9 185 aa5.08□□□□□ -1.6
SNX12-205ENST00000490561 KMT2DO14686 5537 aa5.06□□□□□ -1.6
SNX12-205ENST00000490561 LCE3AQ5TA76 89 aa5.05□□□□□ -1.6
SNX12-205ENST00000490561 PP632Q6XCG6 107 aa5.03□□□□□ -1.6
SNX12-205ENST00000490561 KRTAP5-9P26371 169 aa5.01□□□□□ -1.61
SNX12-205ENST00000490561 NEBP20929 6669 aa4.96□□□□□ -1.61
SNX12-205ENST00000490561 SPRR2FQ96RM1 72 aa4.96□□□□□ -1.62
SNX12-205ENST00000490561 MUC12Q9UKN1 5478 aa4.93□□□□□ -1.62
SNX12-205ENST00000490561 KRTAP19-5Q3LI72 72 aa4.92□□□□□ -1.62
SNX12-205ENST00000490561 KRTAP19-7Q3SYF9 63 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms