RNA–Protein interactions for RNA: ENST00000490115.5

PFKFB4-213, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4, humanhuman

TSL 1 (best)

Gene PFKFB4, Length 1,757 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB4-213ENST00000490115 LCA10Q71F78 164 aa9.86□□□□□ -0.83
PFKFB4-213ENST00000490115 A8MU10 97 aa9.79□□□□□ -0.84
PFKFB4-213ENST00000490115 SEC61GP60059 68 aa9.78□□□□□ -0.84
PFKFB4-213ENST00000490115 J3QL48 77 aa9.77□□□□□ -0.85
PFKFB4-213ENST00000490115 UQCR11O14957 56 aa9.73□□□□□ -0.85
PFKFB4-213ENST00000490115 SPATA8Q6RVD6 105 aa9.7□□□□□ -0.86
PFKFB4-213ENST00000490115 MIR22HGQ0VDD5 57 aa9.64□□□□□ -0.87
PFKFB4-213ENST00000490115 HERC1Q15751 4861 aa9.63□□□□□ -0.87
PFKFB4-213ENST00000490115 LRP2P98164 4655 aa9.62□□□□□ -0.87
PFKFB4-213ENST00000490115 PMAIP1Q13794 54 aa9.62□□□□□ -0.87
PFKFB4-213ENST00000490115 KRTAP3-3Q9BYR6 98 aa9.58□□□□□ -0.88
PFKFB4-213ENST00000490115 S4R3F8 94 aa9.58□□□□□ -0.88
PFKFB4-213ENST00000490115 H1FX-AS1Q4G0G2 97 aa9.58□□□□□ -0.88
PFKFB4-213ENST00000490115 SEC61BP60468 96 aaKnown RBP9.55□□□□□ -0.88
PFKFB4-213ENST00000490115 RBM12B-AS1Q9P1G2 102 aa9.55□□□□□ -0.88
PFKFB4-213ENST00000490115 LPAP08519 4548 aa9.55□□□□□ -0.88
PFKFB4-213ENST00000490115 A6NN06 94 aa9.53□□□□□ -0.88
PFKFB4-213ENST00000490115 A0A1B0GU33 70 aa9.52□□□□□ -0.89
PFKFB4-213ENST00000490115 H0YAA0 97 aa9.42□□□□□ -0.9
PFKFB4-213ENST00000490115 MUC17Q685J3 4493 aa9.39□□□□□ -0.91
PFKFB4-213ENST00000490115 KRTAP10-6P60371 365 aaPredicted RBP9.38□□□□□ -0.91
PFKFB4-213ENST00000490115 KTN1-AS1Q86SY8 53 aa9.38□□□□□ -0.91
PFKFB4-213ENST00000490115 HMCN2Q8NDA2 5059 aa9.36□□□□□ -0.91
PFKFB4-213ENST00000490115 KRTAP3-2Q9BYR7 98 aa9.35□□□□□ -0.91
PFKFB4-213ENST00000490115 CSAG1Q6PB30 78 aa9.35□□□□□ -0.91
PFKFB4-213ENST00000490115 KRTAP4-1Q9BYQ7 146 aa9.24□□□□□ -0.93
PFKFB4-213ENST00000490115 ADM2Q7Z4H4 148 aa9.21□□□□□ -0.94
PFKFB4-213ENST00000490115 P0C880 135 aa9.19□□□□□ -0.94
PFKFB4-213ENST00000490115 K7ERS5 55 aa9.15□□□□□ -0.94
PFKFB4-213ENST00000490115 KRTAP13-4Q3LI77 160 aa9.14□□□□□ -0.95
PFKFB4-213ENST00000490115 KRTAP19-2Q3LHN2 52 aa9.12□□□□□ -0.95
PFKFB4-213ENST00000490115 M0QZ58 72 aa9.07□□□□□ -0.96
PFKFB4-213ENST00000490115 UBR4Q5T4S7 5183 aa9.06□□□□□ -0.96
PFKFB4-213ENST00000490115 A0A0D9SG42 100 aa8.99□□□□□ -0.97
PFKFB4-213ENST00000490115 PRAC1Q96KF2 57 aa8.93□□□□□ -0.98
PFKFB4-213ENST00000490115 FLGP20930 4061 aaPredicted RBP8.92□□□□□ -0.98
PFKFB4-213ENST00000490115 RNF213Q63HN8 5207 aa8.89□□□□□ -0.99
PFKFB4-213ENST00000490115 R4GN34 69 aa8.86□□□□□ -0.99
PFKFB4-213ENST00000490115 MUC2Q02817 5179 aa8.86□□□□□ -0.99
PFKFB4-213ENST00000490115 KRTAP12-1P59990 96 aa8.84□□□□□ -0.99
PFKFB4-213ENST00000490115 ROMO1P60602 79 aa8.84□□□□□ -1
PFKFB4-213ENST00000490115 KRTAP12-2P59991 146 aa8.83□□□□□ -1
PFKFB4-213ENST00000490115 SPINT4Q6UDR6 99 aa8.77□□□□□ -1.01
PFKFB4-213ENST00000490115 LCE2CQ5TA81 110 aa8.73□□□□□ -1.01
PFKFB4-213ENST00000490115 LORP23490 312 aaPredicted RBP8.72□□□□□ -1.01
PFKFB4-213ENST00000490115 KRTAP25-1Q3LHN0 102 aa8.68□□□□□ -1.02
PFKFB4-213ENST00000490115 CRIPTQ9P021 101 aa8.68□□□□□ -1.02
PFKFB4-213ENST00000490115 LINC01554Q52M75 96 aa8.66□□□□□ -1.02
PFKFB4-213ENST00000490115 MT1HP80294 61 aa8.52□□□□□ -1.05
PFKFB4-213ENST00000490115 FAT4Q6V0I7 4981 aa8.51□□□□□ -1.05
PFKFB4-213ENST00000490115 M0R2T5 61 aa8.46□□□□□ -1.05
PFKFB4-213ENST00000490115 SPRR2GQ9BYE4 73 aa8.37□□□□□ -1.07
PFKFB4-213ENST00000490115 LCE2AQ5TA79 106 aaPredicted RBP8.34□□□□□ -1.07
PFKFB4-213ENST00000490115 CAMK2N1Q7Z7J9 78 aa8.34□□□□□ -1.07
PFKFB4-213ENST00000490115 C10orf95Q9H7T3 257 aa8.34□□□□□ -1.07
PFKFB4-213ENST00000490115 MT2AP02795 61 aa8.28□□□□□ -1.08
PFKFB4-213ENST00000490115 KRTAP9-8Q9BYQ0 159 aa8.27□□□□□ -1.08
PFKFB4-213ENST00000490115 KRTAP19-1Q8IUB9 90 aa8.27□□□□□ -1.09
PFKFB4-213ENST00000490115 MT1FP04733 61 aa8.24□□□□□ -1.09
PFKFB4-213ENST00000490115 KRTAP10-10P60014 251 aa8.22□□□□□ -1.09
PFKFB4-213ENST00000490115 PLAC4Q8WY50 150 aa8.17□□□□□ -1.1
PFKFB4-213ENST00000490115 KRTAP19-8Q3LI54 63 aa8.08□□□□□ -1.12
PFKFB4-213ENST00000490115 PP632Q6XCG6 107 aa8.08□□□□□ -1.12
PFKFB4-213ENST00000490115 TNP1P09430 55 aa8.03□□□□□ -1.12
PFKFB4-213ENST00000490115 KRTAP23-1A1A580 65 aa7.99□□□□□ -1.13
PFKFB4-213ENST00000490115 KRTAP9-3Q9BYQ3 159 aa7.97□□□□□ -1.13
PFKFB4-213ENST00000490115 MT1BP07438 61 aa7.91□□□□□ -1.14
PFKFB4-213ENST00000490115 KRTAP15-1Q3LI76 137 aa7.8□□□□□ -1.16
PFKFB4-213ENST00000490115 KRTAP10-5P60370 271 aa7.75□□□□□ -1.17
PFKFB4-213ENST00000490115 MT1XP80297 61 aa7.74□□□□□ -1.17
PFKFB4-213ENST00000490115 LCE2DQ5TA82 110 aaPredicted RBP7.73□□□□□ -1.17
PFKFB4-213ENST00000490115 KRTAP9-2Q9BYQ4 174 aa7.73□□□□□ -1.17
PFKFB4-213ENST00000490115 LCE2BO14633 110 aa7.65□□□□□ -1.18
PFKFB4-213ENST00000490115 PRO2289Q9P1D8 64 aa7.65□□□□□ -1.18
PFKFB4-213ENST00000490115 LCE3AQ5TA76 89 aa7.58□□□□□ -1.2
PFKFB4-213ENST00000490115 FSIP2Q5CZC0 6907 aa7.55□□□□□ -1.2
PFKFB4-213ENST00000490115 KRTAP8-1Q8IUC2 63 aa7.51□□□□□ -1.21
PFKFB4-213ENST00000490115 KRTAP10-12P60413 245 aa7.49□□□□□ -1.21
PFKFB4-213ENST00000490115 USH2AO75445 5202 aa7.46□□□□□ -1.21
PFKFB4-213ENST00000490115 KRTAP10-7P60409 375 aaPredicted RBP7.44□□□□□ -1.22
PFKFB4-213ENST00000490115 CRCT1Q9UGL9 99 aa7.37□□□□□ -1.23
PFKFB4-213ENST00000490115 NDUFAF8A1L188 74 aa7.34□□□□□ -1.23
PFKFB4-213ENST00000490115 SSPOA2VEC9 5147 aa7.32□□□□□ -1.24
PFKFB4-213ENST00000490115 SPRR5A0A1B0GTR4 108 aa7.32□□□□□ -1.24
PFKFB4-213ENST00000490115 KRTAP9-6A0A140TA67 174 aa7.31□□□□□ -1.24
PFKFB4-213ENST00000490115 KRTAP12-3P60328 96 aa7.29□□□□□ -1.24
PFKFB4-213ENST00000490115 LUZP6Q538Z0 58 aa7.25□□□□□ -1.25
PFKFB4-213ENST00000490115 KRTAP19-6Q3LI70 58 aa7.17□□□□□ -1.26
PFKFB4-213ENST00000490115 H3BS24 57 aa7.11□□□□□ -1.27
PFKFB4-213ENST00000490115 FCGBPQ9Y6R7 5405 aaPredicted RBP7.09□□□□□ -1.27
PFKFB4-213ENST00000490115 KRTAP19-5Q3LI72 72 aa7.08□□□□□ -1.28
PFKFB4-213ENST00000490115 KRTAP4-8A0A0G2JLE6 195 aa7.01□□□□□ -1.29
PFKFB4-213ENST00000490115 KRTAP4-8Q9BYQ9 185 aa7.01□□□□□ -1.29
PFKFB4-213ENST00000490115 KMT2DO14686 5537 aa6.94□□□□□ -1.3
PFKFB4-213ENST00000490115 KRTAP19-7Q3SYF9 63 aa6.91□□□□□ -1.3
PFKFB4-213ENST00000490115 KRTAP19-4Q3LI73 84 aa6.87□□□□□ -1.31
PFKFB4-213ENST00000490115 LCE3CQ5T5A8 94 aa6.85□□□□□ -1.31
PFKFB4-213ENST00000490115 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.84□□□□□ -1.31
PFKFB4-213ENST00000490115 MACF1Q9UPN3 7388 aaKnown RBP6.79□□□□□ -1.32
PFKFB4-213ENST00000490115 MT1EP04732 61 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms