RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	KRTAP10-10	P60014	251 aa		5.36	□□□□□ -1.55
GGA1-222	ENST00000489772	C4orf26	Q17RF5	130 aa		5.34	□□□□□ -1.55
GGA1-222	ENST00000489772	ATP5EP2	Q5VTU8	51 aa		5.33	□□□□□ -1.56
GGA1-222	ENST00000489772	USH2A	O75445	5202 aa		5.33	□□□□□ -1.56
GGA1-222	ENST00000489772	HIST1H4A	P62805	103 aa	Known RBP	5.29	□□□□□ -1.56
GGA1-222	ENST00000489772	SSPO	A2VEC9	5147 aa		5.26	□□□□□ -1.57
GGA1-222	ENST00000489772	LINC00643	Q86TS7	51 aa		5.26	□□□□□ -1.57
GGA1-222	ENST00000489772	TRAV22	A0A0B4J277	110 aa		5.25	□□□□□ -1.57
GGA1-222	ENST00000489772	C1orf64	Q8NEQ6	169 aa		5.25	□□□□□ -1.57
GGA1-222	ENST00000489772	KRTAP3-1	Q9BYR8	98 aa		5.24	□□□□□ -1.57
GGA1-222	ENST00000489772	CYP4F30P	Q9H0H9	118 aa		5.23	□□□□□ -1.57
GGA1-222	ENST00000489772	LOC101927531	A0A1B0GV80	90 aa		5.22	□□□□□ -1.57
GGA1-222	ENST00000489772	UQCRQ	O14949	82 aa		5.22	□□□□□ -1.57
GGA1-222	ENST00000489772	C5orf47	Q569G3	176 aa		5.21	□□□□□ -1.58
GGA1-222	ENST00000489772		S4R3F8	94 aa		5.21	□□□□□ -1.58
GGA1-222	ENST00000489772		A0A087WVE0	104 aa		5.2	□□□□□ -1.58
GGA1-222	ENST00000489772	ATOX1	O00244	68 aa		5.19	□□□□□ -1.58
GGA1-222	ENST00000489772	MT-ATP8	P03928	68 aa		5.18	□□□□□ -1.58
GGA1-222	ENST00000489772		H0Y9P7	68 aa		5.17	□□□□□ -1.58
GGA1-222	ENST00000489772	CSAG1	Q6PB30	78 aa		5.17	□□□□□ -1.58
GGA1-222	ENST00000489772	LCA10	Q71F78	164 aa		5.16	□□□□□ -1.58
GGA1-222	ENST00000489772	IMUP	Q9GZP8	106 aa		5.16	□□□□□ -1.58
GGA1-222	ENST00000489772	FAM236A	A0A1B0GUQ0	79 aa		5.14	□□□□□ -1.59
GGA1-222	ENST00000489772	FAM236B	A0A1B0GV22	79 aa		5.14	□□□□□ -1.59
GGA1-222	ENST00000489772	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	5.12	□□□□□ -1.59
GGA1-222	ENST00000489772	ANAPC13	Q9BS18	74 aa		5.12	□□□□□ -1.59
GGA1-222	ENST00000489772	MP68	P56378	58 aa		5.11	□□□□□ -1.59
GGA1-222	ENST00000489772	OCR1	Q9BZK8	76 aa		5.11	□□□□□ -1.59
GGA1-222	ENST00000489772	LINC00208	Q96KT6	92 aa		5.1	□□□□□ -1.59
GGA1-222	ENST00000489772		V9GYY9	64 aa		5.07	□□□□□ -1.6
GGA1-222	ENST00000489772		A8MUN3	132 aa		5.06	□□□□□ -1.6
GGA1-222	ENST00000489772	KRTAP19-6	Q3LI70	58 aa		5.06	□□□□□ -1.6
GGA1-222	ENST00000489772	KLKP1	Q107X0	134 aa		5.05	□□□□□ -1.6
GGA1-222	ENST00000489772	MACF1	Q9UPN3	7388 aa	Known RBP	5.05	□□□□□ -1.6
GGA1-222	ENST00000489772	NDUFC1	O43677	76 aa		5.04	□□□□□ -1.6
GGA1-222	ENST00000489772	SYNE2	Q8WXH0	6885 aa	Known RBP	5.04	□□□□□ -1.6
GGA1-222	ENST00000489772		H3BPC8	53 aa		5.03	□□□□□ -1.6
GGA1-222	ENST00000489772	SPRR2G	Q9BYE4	73 aa		5	□□□□□ -1.61
GGA1-222	ENST00000489772	CRIPT	Q9P021	101 aa		4.98	□□□□□ -1.61
GGA1-222	ENST00000489772	KRTAP23-1	A1A580	65 aa		4.97	□□□□□ -1.61
GGA1-222	ENST00000489772		H0YAA0	97 aa		4.97	□□□□□ -1.61
GGA1-222	ENST00000489772		Q5VV11	94 aa		4.97	□□□□□ -1.61
GGA1-222	ENST00000489772	CCDC179	H3BU77	68 aa		4.95	□□□□□ -1.62
GGA1-222	ENST00000489772	COX7C	P15954	63 aa		4.95	□□□□□ -1.62
GGA1-222	ENST00000489772	KRTAP19-8	Q3LI54	63 aa		4.94	□□□□□ -1.62
GGA1-222	ENST00000489772	SMIM20	Q8N5G0	67 aa		4.93	□□□□□ -1.62
GGA1-222	ENST00000489772	SERP2	Q8N6R1	65 aa		4.93	□□□□□ -1.62
GGA1-222	ENST00000489772	MT1B	P07438	61 aa		4.92	□□□□□ -1.62
GGA1-222	ENST00000489772	ADM2	Q7Z4H4	148 aa		4.92	□□□□□ -1.62
GGA1-222	ENST00000489772	DMAC1	Q96GE9	116 aa		4.92	□□□□□ -1.62
GGA1-222	ENST00000489772	TRAV7	A0A075B6U4	112 aa		4.91	□□□□□ -1.62
GGA1-222	ENST00000489772		A6NN06	94 aa		4.89	□□□□□ -1.63
GGA1-222	ENST00000489772	TMEM258	P61165	79 aa		4.86	□□□□□ -1.63
GGA1-222	ENST00000489772	ACYP2	P14621	99 aa		4.84	□□□□□ -1.63
GGA1-222	ENST00000489772	C20orf197	Q8N268	126 aa		4.83	□□□□□ -1.64
GGA1-222	ENST00000489772	KRTAP10-5	P60370	271 aa		4.81	□□□□□ -1.64
GGA1-222	ENST00000489772	SNURF	Q9Y675	71 aa		4.79	□□□□□ -1.64
GGA1-222	ENST00000489772		R4GN34	69 aa		4.79	□□□□□ -1.64
GGA1-222	ENST00000489772		P0C880	135 aa		4.78	□□□□□ -1.64
GGA1-222	ENST00000489772	RPS28	P62857	69 aa	Known RBP	4.78	□□□□□ -1.64
GGA1-222	ENST00000489772	SPTSSB	Q8NFR3	76 aa		4.78	□□□□□ -1.64
GGA1-222	ENST00000489772	ATP5E	P56381	51 aa	Predicted RBP	4.77	□□□□□ -1.65
GGA1-222	ENST00000489772	KRTAP6-3	Q3LI67	103 aa		4.77	□□□□□ -1.65
GGA1-222	ENST00000489772	CHKB-CPT1B	H3BT56	60 aa		4.76	□□□□□ -1.65
GGA1-222	ENST00000489772		M0QZ58	72 aa		4.76	□□□□□ -1.65
GGA1-222	ENST00000489772	PLAC4	Q8WY50	150 aa		4.75	□□□□□ -1.65
GGA1-222	ENST00000489772	SPANXA2-OT1	Q8N9U9	137 aa		4.74	□□□□□ -1.65
GGA1-222	ENST00000489772		H7BZZ5	65 aa		4.72	□□□□□ -1.65
GGA1-222	ENST00000489772	KRTAP15-1	Q3LI76	137 aa		4.72	□□□□□ -1.65
GGA1-222	ENST00000489772	CYSTM1	Q9H1C7	97 aa		4.72	□□□□□ -1.65
GGA1-222	ENST00000489772	PRO0628	Q9UI54	55 aa		4.72	□□□□□ -1.65
GGA1-222	ENST00000489772	PRO2289	Q9P1D8	64 aa		4.71	□□□□□ -1.66
GGA1-222	ENST00000489772	SERP1	Q9Y6X1	66 aa		4.7	□□□□□ -1.66
GGA1-222	ENST00000489772	NEB	P20929	6669 aa		4.69	□□□□□ -1.66
GGA1-222	ENST00000489772	LINC01554	Q52M75	96 aa		4.68	□□□□□ -1.66
GGA1-222	ENST00000489772	MT1X	P80297	61 aa		4.65	□□□□□ -1.67
GGA1-222	ENST00000489772	MUC12	Q9UKN1	5478 aa		4.62	□□□□□ -1.67
GGA1-222	ENST00000489772	SMIM26	A0A096LP01	95 aa		4.61	□□□□□ -1.67
GGA1-222	ENST00000489772	COA5	Q86WW8	74 aa		4.59	□□□□□ -1.67
GGA1-222	ENST00000489772	KRTAP5-9	P26371	169 aa		4.57	□□□□□ -1.68
GGA1-222	ENST00000489772	KMT2D	O14686	5537 aa		4.57	□□□□□ -1.68
GGA1-222	ENST00000489772	MDN1	Q9NU22	5596 aa		4.54	□□□□□ -1.68
GGA1-222	ENST00000489772	KRTAP12-2	P59991	146 aa		4.53	□□□□□ -1.68
GGA1-222	ENST00000489772	PMAIP1	Q13794	54 aa		4.53	□□□□□ -1.69
GGA1-222	ENST00000489772	KRTAP13-4	Q3LI77	160 aa		4.49	□□□□□ -1.69
GGA1-222	ENST00000489772	KRTAP8-1	Q8IUC2	63 aa		4.49	□□□□□ -1.69
GGA1-222	ENST00000489772	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.48	□□□□□ -1.69
GGA1-222	ENST00000489772	SPRR2F	Q96RM1	72 aa		4.47	□□□□□ -1.69
GGA1-222	ENST00000489772	PSPHP1	O15172	72 aa		4.46	□□□□□ -1.7
GGA1-222	ENST00000489772	KRTAP20-1	Q3LI63	56 aa		4.45	□□□□□ -1.7
GGA1-222	ENST00000489772	PRAC1	Q96KF2	57 aa		4.45	□□□□□ -1.7
GGA1-222	ENST00000489772	KRTAP10-7	P60409	375 aa	Predicted RBP	4.44	□□□□□ -1.7
GGA1-222	ENST00000489772		Q1T7F1	81 aa		4.44	□□□□□ -1.7
GGA1-222	ENST00000489772	CAMK2N1	Q7Z7J9	78 aa		4.43	□□□□□ -1.7
GGA1-222	ENST00000489772		A0A1B0GU33	70 aa		4.42	□□□□□ -1.7
GGA1-222	ENST00000489772	KRTAP10-12	P60413	245 aa		4.42	□□□□□ -1.7
GGA1-222	ENST00000489772		A0A0D9SG42	100 aa		4.4	□□□□□ -1.71
GGA1-222	ENST00000489772	SPATA8	Q6RVD6	105 aa		4.4	□□□□□ -1.71
GGA1-222	ENST00000489772	SPRR2E	P22531	72 aa		4.39	□□□□□ -1.71
GGA1-222	ENST00000489772	SPRR2B	P35325	72 aa		4.39	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms