RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 C5orf47Q569G3 176 aa4.23□□□□□ -1.73
SMC6-209ENST00000489535 C20orf197Q8N268 126 aa4.23□□□□□ -1.73
SMC6-209ENST00000489535 TRAV22A0A0B4J277 110 aa4.22□□□□□ -1.73
SMC6-209ENST00000489535 MP68P56378 58 aa4.21□□□□□ -1.74
SMC6-209ENST00000489535 SNURFQ9Y675 71 aa4.21□□□□□ -1.74
SMC6-209ENST00000489535 A0A0U1RQV1 116 aa4.2□□□□□ -1.74
SMC6-209ENST00000489535 KRTAP5-8O75690 187 aa4.2□□□□□ -1.74
SMC6-209ENST00000489535 A8MUU9 505 aa4.19□□□□□ -1.74
SMC6-209ENST00000489535 RPS28P62857 69 aaKnown RBP4.19□□□□□ -1.74
SMC6-209ENST00000489535 KLKP1Q107X0 134 aa4.19□□□□□ -1.74
SMC6-209ENST00000489535 KRTAP13-3Q3SY46 172 aa4.19□□□□□ -1.74
SMC6-209ENST00000489535 LINC00208Q96KT6 92 aa4.19□□□□□ -1.74
SMC6-209ENST00000489535 C20orf166-AS1Q96NR2 134 aa4.19□□□□□ -1.74
SMC6-209ENST00000489535 CYSTM1Q9H1C7 97 aa4.19□□□□□ -1.74
SMC6-209ENST00000489535 H3BPC8 53 aa4.18□□□□□ -1.74
SMC6-209ENST00000489535 Q5W150 140 aa4.18□□□□□ -1.74
SMC6-209ENST00000489535 PCLOQ9Y6V0 5065 aa4.17□□□□□ -1.74
SMC6-209ENST00000489535 C1orf64Q8NEQ6 169 aa4.17□□□□□ -1.74
SMC6-209ENST00000489535 ZCCHC13Q8WW36 166 aaKnown RBP4.17□□□□□ -1.74
SMC6-209ENST00000489535 Q75L30 129 aa4.16□□□□□ -1.74
SMC6-209ENST00000489535 LPAP08519 4548 aa4.15□□□□□ -1.74
SMC6-209ENST00000489535 TPRXLQ17RH7 258 aa4.15□□□□□ -1.75
SMC6-209ENST00000489535 LOC101927531A0A1B0GV80 90 aa4.14□□□□□ -1.75
SMC6-209ENST00000489535 NDUFC1O43677 76 aa4.14□□□□□ -1.75
SMC6-209ENST00000489535 TMEM258P61165 79 aa4.14□□□□□ -1.75
SMC6-209ENST00000489535 H7BZZ5 65 aa4.13□□□□□ -1.75
SMC6-209ENST00000489535 RPL37P61927 97 aaKnown RBP4.13□□□□□ -1.75
SMC6-209ENST00000489535 PCOTHQ58A44 107 aa4.12□□□□□ -1.75
SMC6-209ENST00000489535 ATP11AUNQ6ZP68 121 aa4.11□□□□□ -1.75
SMC6-209ENST00000489535 CYP4F30PQ9H0H9 118 aa4.1□□□□□ -1.75
SMC6-209ENST00000489535 LRP2P98164 4655 aa4.09□□□□□ -1.75
SMC6-209ENST00000489535 C7orf65Q6ZTY9 151 aa4.09□□□□□ -1.75
SMC6-209ENST00000489535 MUC17Q685J3 4493 aa4.09□□□□□ -1.75
SMC6-209ENST00000489535 FAM236DA0A1B0GTK5 79 aa4.08□□□□□ -1.76
SMC6-209ENST00000489535 FAM236CP0DP71 79 aa4.08□□□□□ -1.76
SMC6-209ENST00000489535 HERC1Q15751 4861 aa4.08□□□□□ -1.76
SMC6-209ENST00000489535 ATP5EP56381 51 aaPredicted RBP4.06□□□□□ -1.76
SMC6-209ENST00000489535 HRES1P13985 223 aa4.05□□□□□ -1.76
SMC6-209ENST00000489535 SPINK7P58062 85 aa4.05□□□□□ -1.76
SMC6-209ENST00000489535 SPANXA2-OT1Q8N9U9 137 aa4.05□□□□□ -1.76
SMC6-209ENST00000489535 HMCN2Q8NDA2 5059 aa4.03□□□□□ -1.76
SMC6-209ENST00000489535 SEC61BP60468 96 aaKnown RBP4.02□□□□□ -1.77
SMC6-209ENST00000489535 SERP1Q9Y6X1 66 aa4.02□□□□□ -1.77
SMC6-209ENST00000489535 LCE3EQ5T5B0 92 aa4.01□□□□□ -1.77
SMC6-209ENST00000489535 C4orf26Q17RF5 130 aa4□□□□□ -1.77
SMC6-209ENST00000489535 KRTAP5-5Q701N2 237 aaPredicted RBP3.99□□□□□ -1.77
SMC6-209ENST00000489535 DMAC1Q96GE9 116 aa3.97□□□□□ -1.77
SMC6-209ENST00000489535 SMIM26A0A096LP01 95 aa3.96□□□□□ -1.78
SMC6-209ENST00000489535 ACYP2P14621 99 aa3.96□□□□□ -1.78
SMC6-209ENST00000489535 COX6B2Q6YFQ2 88 aa3.95□□□□□ -1.78
SMC6-209ENST00000489535 COA5Q86WW8 74 aa3.95□□□□□ -1.78
SMC6-209ENST00000489535 PRO0628Q9UI54 55 aa3.95□□□□□ -1.78
SMC6-209ENST00000489535 A8MUN3 132 aa3.94□□□□□ -1.78
SMC6-209ENST00000489535 KRTAP4-1Q9BYQ7 146 aa3.93□□□□□ -1.78
SMC6-209ENST00000489535 RBM12B-AS1Q9P1G2 102 aa3.92□□□□□ -1.78
SMC6-209ENST00000489535 CHKB-CPT1BH3BT56 60 aa3.91□□□□□ -1.78
SMC6-209ENST00000489535 H1FX-AS1Q4G0G2 97 aa3.86□□□□□ -1.79
SMC6-209ENST00000489535 S4R3F8 94 aa3.85□□□□□ -1.79
SMC6-209ENST00000489535 RNF213Q63HN8 5207 aa3.85□□□□□ -1.79
SMC6-209ENST00000489535 KRTAP12-2P59991 146 aa3.84□□□□□ -1.79
SMC6-209ENST00000489535 LCA10Q71F78 164 aa3.83□□□□□ -1.8
SMC6-209ENST00000489535 SPTSSBQ8NFR3 76 aa3.83□□□□□ -1.8
SMC6-209ENST00000489535 UBR4Q5T4S7 5183 aa3.8□□□□□ -1.8
SMC6-209ENST00000489535 Q1T7F1 81 aa3.8□□□□□ -1.8
SMC6-209ENST00000489535 KRTAP19-2Q3LHN2 52 aa3.8□□□□□ -1.8
SMC6-209ENST00000489535 FLGP20930 4061 aaPredicted RBP3.8□□□□□ -1.8
SMC6-209ENST00000489535 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
SMC6-209ENST00000489535 LCE1BQ5T7P3 118 aa3.79□□□□□ -1.8
SMC6-209ENST00000489535 BRK1Q8WUW1 75 aa3.79□□□□□ -1.8
SMC6-209ENST00000489535 V9GYY9 64 aa3.79□□□□□ -1.8
SMC6-209ENST00000489535 LINC01558Q9Y6Z2 57 aa3.78□□□□□ -1.8
SMC6-209ENST00000489535 MUC2Q02817 5179 aa3.77□□□□□ -1.81
SMC6-209ENST00000489535 PRR15LQ9BU68 103 aa3.75□□□□□ -1.81
SMC6-209ENST00000489535 PSPHP1O15172 72 aa3.74□□□□□ -1.81
SMC6-209ENST00000489535 CSAG1Q6PB30 78 aa3.74□□□□□ -1.81
SMC6-209ENST00000489535 A0A1B0GU69 56 aa3.73□□□□□ -1.81
SMC6-209ENST00000489535 SEC61GP60059 68 aa3.72□□□□□ -1.81
SMC6-209ENST00000489535 FAT4Q6V0I7 4981 aa3.71□□□□□ -1.82
SMC6-209ENST00000489535 Q5VV11 94 aa3.7□□□□□ -1.82
SMC6-209ENST00000489535 PMAIP1Q13794 54 aa3.69□□□□□ -1.82
SMC6-209ENST00000489535 MT1HP80294 61 aa3.67□□□□□ -1.82
SMC6-209ENST00000489535 ADM2Q7Z4H4 148 aa3.66□□□□□ -1.82
SMC6-209ENST00000489535 M0R2T5 61 aa3.65□□□□□ -1.83
SMC6-209ENST00000489535 A6NED7 52 aa3.64□□□□□ -1.83
SMC6-209ENST00000489535 H0YAA0 97 aa3.64□□□□□ -1.83
SMC6-209ENST00000489535 P0C880 135 aa3.63□□□□□ -1.83
SMC6-209ENST00000489535 A0A1B0GU33 70 aa3.61□□□□□ -1.83
SMC6-209ENST00000489535 UQCR11O14957 56 aa3.61□□□□□ -1.83
SMC6-209ENST00000489535 KTN1-AS1Q86SY8 53 aa3.6□□□□□ -1.83
SMC6-209ENST00000489535 CDC42SE1Q9NRR8 79 aa3.58□□□□□ -1.84
SMC6-209ENST00000489535 MIR22HGQ0VDD5 57 aa3.57□□□□□ -1.84
SMC6-209ENST00000489535 SPATA8Q6RVD6 105 aa3.57□□□□□ -1.84
SMC6-209ENST00000489535 KRTAP13-4Q3LI77 160 aa3.55□□□□□ -1.84
SMC6-209ENST00000489535 A6NN06 94 aa3.54□□□□□ -1.84
SMC6-209ENST00000489535 A8MU10 97 aa3.54□□□□□ -1.84
SMC6-209ENST00000489535 M0QZ58 72 aa3.54□□□□□ -1.84
SMC6-209ENST00000489535 R4GN34 69 aa3.53□□□□□ -1.84
SMC6-209ENST00000489535 MT2AP02795 61 aa3.52□□□□□ -1.85
SMC6-209ENST00000489535 A0A0D9SG42 100 aa3.5□□□□□ -1.85
SMC6-209ENST00000489535 MT1FP04733 61 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms