RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-208ENST00000489247 SPANXA2-OT1Q8N9U9 137 aa3.11□□□□□ -1.91
ATG4A-208ENST00000489247 SERP1Q9Y6X1 66 aa3.11□□□□□ -1.91
ATG4A-208ENST00000489247 LINC00313P59037 77 aa3.1□□□□□ -1.91
ATG4A-208ENST00000489247 KRTAP10-5P60370 271 aa3.1□□□□□ -1.91
ATG4A-208ENST00000489247 CYP4F30PQ9H0H9 118 aa3.1□□□□□ -1.91
ATG4A-208ENST00000489247 LINC00208Q96KT6 92 aa3.09□□□□□ -1.91
ATG4A-208ENST00000489247 LOC101927531A0A1B0GV80 90 aa3.08□□□□□ -1.92
ATG4A-208ENST00000489247 OXTP01178 125 aa3.08□□□□□ -1.92
ATG4A-208ENST00000489247 KRTAP10-8P60410 259 aa3.08□□□□□ -1.92
ATG4A-208ENST00000489247 C1orf64Q8NEQ6 169 aa3.08□□□□□ -1.92
ATG4A-208ENST00000489247 EPPK1P58107 5090 aaKnown RBP3.08□□□□□ -1.92
ATG4A-208ENST00000489247 LRP1Q07954 4544 aaKnown RBP3.07□□□□□ -1.92
ATG4A-208ENST00000489247 KIAA1109Q2LD37 5005 aa3.07□□□□□ -1.92
ATG4A-208ENST00000489247 Q5VSD8 79 aa3.07□□□□□ -1.92
ATG4A-208ENST00000489247 Q5W150 140 aa3.07□□□□□ -1.92
ATG4A-208ENST00000489247 NDUFS5O43920 106 aa3.05□□□□□ -1.92
ATG4A-208ENST00000489247 C20orf166-AS1Q96NR2 134 aa3.05□□□□□ -1.92
ATG4A-208ENST00000489247 A8MUU9 505 aa3.04□□□□□ -1.92
ATG4A-208ENST00000489247 FP248Q71RG6 208 aaPredicted RBP3.04□□□□□ -1.92
ATG4A-208ENST00000489247 BIRC6Q9NR09 4857 aa3.04□□□□□ -1.92
ATG4A-208ENST00000489247 SMIM26A0A096LP01 95 aa3.03□□□□□ -1.92
ATG4A-208ENST00000489247 HERC2O95714 4834 aa3.03□□□□□ -1.93
ATG4A-208ENST00000489247 FLG2Q5D862 2391 aaPredicted RBP3.02□□□□□ -1.93
ATG4A-208ENST00000489247 MT1HL1P0DM35 61 aa3.02□□□□□ -1.93
ATG4A-208ENST00000489247 KRTAP10-12P60413 245 aa3.02□□□□□ -1.93
ATG4A-208ENST00000489247 MYCBP2O75592 4640 aa3.01□□□□□ -1.93
ATG4A-208ENST00000489247 DMAC1Q96GE9 116 aa2.99□□□□□ -1.93
ATG4A-208ENST00000489247 PCOTHQ58A44 107 aa2.98□□□□□ -1.93
ATG4A-208ENST00000489247 HRES1P13985 223 aa2.97□□□□□ -1.93
ATG4A-208ENST00000489247 PRR4Q16378 134 aa2.97□□□□□ -1.93
ATG4A-208ENST00000489247 Q1T7F1 81 aa2.97□□□□□ -1.93
ATG4A-208ENST00000489247 C7orf65Q6ZTY9 151 aa2.97□□□□□ -1.93
ATG4A-208ENST00000489247 COA5Q86WW8 74 aa2.97□□□□□ -1.93
ATG4A-208ENST00000489247 ABCA13Q86UQ4 5058 aa2.95□□□□□ -1.94
ATG4A-208ENST00000489247 C9orf92A6NGG3 77 aa2.95□□□□□ -1.94
ATG4A-208ENST00000489247 RETNLBQ9BQ08 111 aa2.95□□□□□ -1.94
ATG4A-208ENST00000489247 V9GYY9 64 aa2.95□□□□□ -1.94
ATG4A-208ENST00000489247 A8MUN3 132 aa2.94□□□□□ -1.94
ATG4A-208ENST00000489247 ACYP2P14621 99 aa2.94□□□□□ -1.94
ATG4A-208ENST00000489247 RPL37P61927 97 aaKnown RBP2.94□□□□□ -1.94
ATG4A-208ENST00000489247 C4orf26Q17RF5 130 aa2.93□□□□□ -1.94
ATG4A-208ENST00000489247 TPRXLQ17RH7 258 aa2.93□□□□□ -1.94
ATG4A-208ENST00000489247 LCE3CQ5T5A8 94 aa2.92□□□□□ -1.94
ATG4A-208ENST00000489247 DMBT1Q9UGM3 2413 aaPredicted RBP2.91□□□□□ -1.94
ATG4A-208ENST00000489247 MUC17Q685J3 4493 aa2.9□□□□□ -1.95
ATG4A-208ENST00000489247 SPINK7P58062 85 aa2.9□□□□□ -1.95
ATG4A-208ENST00000489247 LINC01558Q9Y6Z2 57 aa2.9□□□□□ -1.95
ATG4A-208ENST00000489247 ATP11AUNQ6ZP68 121 aa2.88□□□□□ -1.95
ATG4A-208ENST00000489247 Q5VV11 94 aa2.87□□□□□ -1.95
ATG4A-208ENST00000489247 COX6B2Q6YFQ2 88 aa2.87□□□□□ -1.95
ATG4A-208ENST00000489247 PCLOQ9Y6V0 5065 aa2.87□□□□□ -1.95
ATG4A-208ENST00000489247 CHKB-CPT1BH3BT56 60 aa2.86□□□□□ -1.95
ATG4A-208ENST00000489247 LRP2P98164 4655 aa2.86□□□□□ -1.95
ATG4A-208ENST00000489247 PSPHP1O15172 72 aa2.83□□□□□ -1.96
ATG4A-208ENST00000489247 SPTSSBQ8NFR3 76 aa2.83□□□□□ -1.96
ATG4A-208ENST00000489247 PRR15LQ9BU68 103 aa2.83□□□□□ -1.96
ATG4A-208ENST00000489247 HMCN2Q8NDA2 5059 aa2.82□□□□□ -1.96
ATG4A-208ENST00000489247 PRO0628Q9UI54 55 aa2.82□□□□□ -1.96
ATG4A-208ENST00000489247 LPAP08519 4548 aa2.81□□□□□ -1.96
ATG4A-208ENST00000489247 HERC1Q15751 4861 aa2.81□□□□□ -1.96
ATG4A-208ENST00000489247 A0A1B0GU69 56 aa2.78□□□□□ -1.96
ATG4A-208ENST00000489247 H1FX-AS1Q4G0G2 97 aa2.77□□□□□ -1.97
ATG4A-208ENST00000489247 BRK1Q8WUW1 75 aa2.77□□□□□ -1.97
ATG4A-208ENST00000489247 CDC42SE1Q9NRR8 79 aa2.77□□□□□ -1.97
ATG4A-208ENST00000489247 LCA10Q71F78 164 aa2.76□□□□□ -1.97
ATG4A-208ENST00000489247 A6NED7 52 aa2.75□□□□□ -1.97
ATG4A-208ENST00000489247 SPATA8Q6RVD6 105 aa2.75□□□□□ -1.97
ATG4A-208ENST00000489247 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
ATG4A-208ENST00000489247 SEC61GP60059 68 aa2.74□□□□□ -1.97
ATG4A-208ENST00000489247 RBM12B-AS1Q9P1G2 102 aa2.74□□□□□ -1.97
ATG4A-208ENST00000489247 S4R3F8 94 aa2.74□□□□□ -1.97
ATG4A-208ENST00000489247 UQCR11O14957 56 aa2.73□□□□□ -1.97
ATG4A-208ENST00000489247 KRTAP19-2Q3LHN2 52 aa2.73□□□□□ -1.97
ATG4A-208ENST00000489247 KRTAP4-1Q9BYQ7 146 aa2.72□□□□□ -1.97
ATG4A-208ENST00000489247 FLGP20930 4061 aaPredicted RBP2.72□□□□□ -1.97
ATG4A-208ENST00000489247 A8MU10 97 aa2.71□□□□□ -1.98
ATG4A-208ENST00000489247 H0YAA0 97 aa2.71□□□□□ -1.98
ATG4A-208ENST00000489247 MIR22HGQ0VDD5 57 aa2.7□□□□□ -1.98
ATG4A-208ENST00000489247 A0A1B0GU33 70 aa2.69□□□□□ -1.98
ATG4A-208ENST00000489247 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
ATG4A-208ENST00000489247 CSAG1Q6PB30 78 aa2.68□□□□□ -1.98
ATG4A-208ENST00000489247 A6NN06 94 aa2.67□□□□□ -1.98
ATG4A-208ENST00000489247 LCE3AQ5TA76 89 aa2.65□□□□□ -1.99
ATG4A-208ENST00000489247 P0C880 135 aa2.63□□□□□ -1.99
ATG4A-208ENST00000489247 PMAIP1Q13794 54 aa2.63□□□□□ -1.99
ATG4A-208ENST00000489247 ADM2Q7Z4H4 148 aa2.62□□□□□ -1.99
ATG4A-208ENST00000489247 RNF213Q63HN8 5207 aa2.61□□□□□ -1.99
ATG4A-208ENST00000489247 M0QZ58 72 aa2.61□□□□□ -1.99
ATG4A-208ENST00000489247 KRTAP13-4Q3LI77 160 aa2.61□□□□□ -1.99
ATG4A-208ENST00000489247 MUC2Q02817 5179 aa2.6□□□□□ -1.99
ATG4A-208ENST00000489247 UBR4Q5T4S7 5183 aa2.59□□□□□ -1.99
ATG4A-208ENST00000489247 KTN1-AS1Q86SY8 53 aa2.59□□□□□ -1.99
ATG4A-208ENST00000489247 FAT4Q6V0I7 4981 aa2.58□□□□□ -2
ATG4A-208ENST00000489247 KRTAP12-2P59991 146 aa2.56□□□□□ -2
ATG4A-208ENST00000489247 K7ERS5 55 aa2.55□□□□□ -2
ATG4A-208ENST00000489247 CRIPTQ9P021 101 aa2.55□□□□□ -2
ATG4A-208ENST00000489247 KRTAP12-1P59990 96 aa2.53□□□□□ -2
ATG4A-208ENST00000489247 MT1HP80294 61 aa2.52□□□□□ -2.01
ATG4A-208ENST00000489247 R4GN34 69 aa2.52□□□□□ -2.01
ATG4A-208ENST00000489247 A0A0D9SG42 100 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms