RNA–Protein interactions for RNA: ENST00000488723.1

CDK5RAP1-214, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 3

Gene CDK5RAP1, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-214ENST00000488723 KRTAP3-3Q9BYR6 98 aa8.06□□□□□ -1.12
CDK5RAP1-214ENST00000488723 NDUFC1O43677 76 aa8.03□□□□□ -1.12
CDK5RAP1-214ENST00000488723 C20orf197Q8N268 126 aa8.03□□□□□ -1.12
CDK5RAP1-214ENST00000488723 SNURFQ9Y675 71 aa8.02□□□□□ -1.13
CDK5RAP1-214ENST00000488723 COX7CP15954 63 aa8.01□□□□□ -1.13
CDK5RAP1-214ENST00000488723 KRTAP9-3Q9BYQ3 159 aa7.98□□□□□ -1.13
CDK5RAP1-214ENST00000488723 ACYP2P14621 99 aa7.97□□□□□ -1.13
CDK5RAP1-214ENST00000488723 SPANXA2-OT1Q8N9U9 137 aa7.97□□□□□ -1.13
CDK5RAP1-214ENST00000488723 H0YAA0 97 aa7.91□□□□□ -1.14
CDK5RAP1-214ENST00000488723 ANAPC13Q9BS18 74 aa7.89□□□□□ -1.15
CDK5RAP1-214ENST00000488723 FSIP2Q5CZC0 6907 aa7.83□□□□□ -1.16
CDK5RAP1-214ENST00000488723 LCE2BO14633 110 aa7.82□□□□□ -1.16
CDK5RAP1-214ENST00000488723 SPTSSBQ8NFR3 76 aa7.82□□□□□ -1.16
CDK5RAP1-214ENST00000488723 CRIPTQ9P021 101 aa7.81□□□□□ -1.16
CDK5RAP1-214ENST00000488723 CRCT1Q9UGL9 99 aa7.8□□□□□ -1.16
CDK5RAP1-214ENST00000488723 H7BZZ5 65 aa7.79□□□□□ -1.16
CDK5RAP1-214ENST00000488723 USH2AO75445 5202 aa7.78□□□□□ -1.16
CDK5RAP1-214ENST00000488723 CHKB-CPT1BH3BT56 60 aa7.77□□□□□ -1.17
CDK5RAP1-214ENST00000488723 KRTAP9-6A0A140TA67 174 aa7.76□□□□□ -1.17
CDK5RAP1-214ENST00000488723 ADM2Q7Z4H4 148 aa7.74□□□□□ -1.17
CDK5RAP1-214ENST00000488723 SPRR2GQ9BYE4 73 aa7.74□□□□□ -1.17
CDK5RAP1-214ENST00000488723 KRTAP19-1Q8IUB9 90 aa7.73□□□□□ -1.17
CDK5RAP1-214ENST00000488723 CYSTM1Q9H1C7 97 aa7.72□□□□□ -1.17
CDK5RAP1-214ENST00000488723 CCDC179H3BU77 68 aa7.69□□□□□ -1.18
CDK5RAP1-214ENST00000488723 COA5Q86WW8 74 aa7.65□□□□□ -1.18
CDK5RAP1-214ENST00000488723 KRTAP19-8Q3LI54 63 aa7.62□□□□□ -1.19
CDK5RAP1-214ENST00000488723 KRTAP3-2Q9BYR7 98 aa7.62□□□□□ -1.19
CDK5RAP1-214ENST00000488723 SSPOA2VEC9 5147 aa7.62□□□□□ -1.19
CDK5RAP1-214ENST00000488723 P0C880 135 aa7.6□□□□□ -1.19
CDK5RAP1-214ENST00000488723 ATP5EP56381 51 aaPredicted RBP7.59□□□□□ -1.19
CDK5RAP1-214ENST00000488723 Q5VV11 94 aa7.57□□□□□ -1.2
CDK5RAP1-214ENST00000488723 R4GN34 69 aa7.55□□□□□ -1.2
CDK5RAP1-214ENST00000488723 KRTAP19-6Q3LI70 58 aa7.54□□□□□ -1.2
CDK5RAP1-214ENST00000488723 MT1BP07438 61 aa7.51□□□□□ -1.21
CDK5RAP1-214ENST00000488723 TMEM258P61165 79 aa7.49□□□□□ -1.21
CDK5RAP1-214ENST00000488723 M0QZ58 72 aa7.47□□□□□ -1.21
CDK5RAP1-214ENST00000488723 SEC61GP60059 68 aa7.45□□□□□ -1.22
CDK5RAP1-214ENST00000488723 FCGBPQ9Y6R7 5405 aaPredicted RBP7.41□□□□□ -1.22
CDK5RAP1-214ENST00000488723 SERP1Q9Y6X1 66 aa7.41□□□□□ -1.22
CDK5RAP1-214ENST00000488723 PLAC4Q8WY50 150 aa7.35□□□□□ -1.23
CDK5RAP1-214ENST00000488723 A6NN06 94 aa7.31□□□□□ -1.24
CDK5RAP1-214ENST00000488723 PCP4P48539 62 aa7.31□□□□□ -1.24
CDK5RAP1-214ENST00000488723 KRTAP10-5P60370 271 aa7.3□□□□□ -1.24
CDK5RAP1-214ENST00000488723 LINC01554Q52M75 96 aa7.3□□□□□ -1.24
CDK5RAP1-214ENST00000488723 A0A1B0GU69 56 aa7.27□□□□□ -1.25
CDK5RAP1-214ENST00000488723 A0A1B0GU33 70 aa7.26□□□□□ -1.25
CDK5RAP1-214ENST00000488723 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.22□□□□□ -1.25
CDK5RAP1-214ENST00000488723 KRTAP13-4Q3LI77 160 aa7.22□□□□□ -1.25
CDK5RAP1-214ENST00000488723 PRO2289Q9P1D8 64 aa7.22□□□□□ -1.25
CDK5RAP1-214ENST00000488723 PRR15LQ9BU68 103 aa7.21□□□□□ -1.26
CDK5RAP1-214ENST00000488723 LINC01558Q9Y6Z2 57 aa7.21□□□□□ -1.26
CDK5RAP1-214ENST00000488723 MT1XP80297 61 aa7.14□□□□□ -1.27
CDK5RAP1-214ENST00000488723 SPATA8Q6RVD6 105 aa7.11□□□□□ -1.27
CDK5RAP1-214ENST00000488723 SMIM26A0A096LP01 95 aa7.07□□□□□ -1.28
CDK5RAP1-214ENST00000488723 V9GYY9 64 aa7.07□□□□□ -1.28
CDK5RAP1-214ENST00000488723 MACF1Q9UPN3 7388 aaKnown RBP7.06□□□□□ -1.28
CDK5RAP1-214ENST00000488723 A0A0D9SG42 100 aa7.04□□□□□ -1.28
CDK5RAP1-214ENST00000488723 RPS28P62857 69 aaKnown RBP7.03□□□□□ -1.28
CDK5RAP1-214ENST00000488723 KRTAP9-7A8MTY7 169 aa7.02□□□□□ -1.29
CDK5RAP1-214ENST00000488723 Q1T7F1 81 aa7.01□□□□□ -1.29
CDK5RAP1-214ENST00000488723 UQCR11O14957 56 aa6.98□□□□□ -1.29
CDK5RAP1-214ENST00000488723 CAMK2N1Q7Z7J9 78 aa6.98□□□□□ -1.29
CDK5RAP1-214ENST00000488723 KRTAP12-2P59991 146 aa6.97□□□□□ -1.29
CDK5RAP1-214ENST00000488723 SYNE2Q8WXH0 6885 aaKnown RBP6.96□□□□□ -1.29
CDK5RAP1-214ENST00000488723 KRTAP12-1P59990 96 aa6.95□□□□□ -1.3
CDK5RAP1-214ENST00000488723 SPINT4Q6UDR6 99 aa6.94□□□□□ -1.3
CDK5RAP1-214ENST00000488723 KRTAP6-3Q3LI67 103 aa6.93□□□□□ -1.3
CDK5RAP1-214ENST00000488723 A8MU10 97 aa6.9□□□□□ -1.3
CDK5RAP1-214ENST00000488723 PSPHP1O15172 72 aa6.84□□□□□ -1.31
CDK5RAP1-214ENST00000488723 KRTAP10-12P60413 245 aa6.83□□□□□ -1.32
CDK5RAP1-214ENST00000488723 MIR22HGQ0VDD5 57 aa6.82□□□□□ -1.32
CDK5RAP1-214ENST00000488723 KRTAP10-7P60409 375 aaPredicted RBP6.79□□□□□ -1.32
CDK5RAP1-214ENST00000488723 KRTAP5-9P26371 169 aa6.78□□□□□ -1.32
CDK5RAP1-214ENST00000488723 KMT2DO14686 5537 aa6.72□□□□□ -1.33
CDK5RAP1-214ENST00000488723 KRTAP8-1Q8IUC2 63 aa6.72□□□□□ -1.33
CDK5RAP1-214ENST00000488723 KRTAP4-8A0A0G2JLE6 195 aa6.68□□□□□ -1.34
CDK5RAP1-214ENST00000488723 KRTAP4-8Q9BYQ9 185 aa6.68□□□□□ -1.34
CDK5RAP1-214ENST00000488723 A6NED7 52 aa6.67□□□□□ -1.34
CDK5RAP1-214ENST00000488723 K7ERS5 55 aa6.67□□□□□ -1.34
CDK5RAP1-214ENST00000488723 C10orf95Q9H7T3 257 aa6.61□□□□□ -1.35
CDK5RAP1-214ENST00000488723 SPRR2FQ96RM1 72 aa6.6□□□□□ -1.35
CDK5RAP1-214ENST00000488723 TNP1P09430 55 aa6.57□□□□□ -1.36
CDK5RAP1-214ENST00000488723 MUC12Q9UKN1 5478 aa6.57□□□□□ -1.36
CDK5RAP1-214ENST00000488723 NEBP20929 6669 aa6.51□□□□□ -1.37
CDK5RAP1-214ENST00000488723 CDC42SE1Q9NRR8 79 aa6.49□□□□□ -1.37
CDK5RAP1-214ENST00000488723 MDN1Q9NU22 5596 aa6.49□□□□□ -1.37
CDK5RAP1-214ENST00000488723 SPRR2EP22531 72 aa6.41□□□□□ -1.38
CDK5RAP1-214ENST00000488723 SPRR2BP35325 72 aa6.41□□□□□ -1.38
CDK5RAP1-214ENST00000488723 SPRR2AP35326 72 aa6.41□□□□□ -1.38
CDK5RAP1-214ENST00000488723 KRTAP25-1Q3LHN0 102 aa6.41□□□□□ -1.38
CDK5RAP1-214ENST00000488723 LCE1AQ5T7P2 110 aa6.4□□□□□ -1.38
CDK5RAP1-214ENST00000488723 KRTAP19-7Q3SYF9 63 aa6.38□□□□□ -1.39
CDK5RAP1-214ENST00000488723 LCE3AQ5TA76 89 aa6.33□□□□□ -1.4
CDK5RAP1-214ENST00000488723 MT1EP04732 61 aa6.31□□□□□ -1.4
CDK5RAP1-214ENST00000488723 KRTAP19-5Q3LI72 72 aa6.3□□□□□ -1.4
CDK5RAP1-214ENST00000488723 KRTAP23-1A1A580 65 aa6.26□□□□□ -1.41
CDK5RAP1-214ENST00000488723 ROMO1P60602 79 aa6.25□□□□□ -1.41
CDK5RAP1-214ENST00000488723 KRTAP19-3Q7Z4W3 81 aa6.21□□□□□ -1.42
CDK5RAP1-214ENST00000488723 SPRR2DP22532 72 aa6.2□□□□□ -1.42
CDK5RAP1-214ENST00000488723 KRTAP20-1Q3LI63 56 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 2283.7 ms