RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 KRTAP4-11Q9BYQ6 195 aa7.19□□□□□ -1.26
CXCL12-207ENST00000488591 KRTAP3-1Q9BYR8 98 aa7.19□□□□□ -1.26
CXCL12-207ENST00000488591 K7ERU9 68 aa7.18□□□□□ -1.26
CXCL12-207ENST00000488591 LCE4AQ5TA78 99 aa7.18□□□□□ -1.26
CXCL12-207ENST00000488591 S4R3F8 94 aa7.17□□□□□ -1.26
CXCL12-207ENST00000488591 MP68P56378 58 aa7.15□□□□□ -1.26
CXCL12-207ENST00000488591 SCGB1A1P11684 91 aa7.14□□□□□ -1.27
CXCL12-207ENST00000488591 OCR1Q9BZK8 76 aa7.14□□□□□ -1.27
CXCL12-207ENST00000488591 C5orf47Q569G3 176 aa7.13□□□□□ -1.27
CXCL12-207ENST00000488591 LINC00208Q96KT6 92 aa7.13□□□□□ -1.27
CXCL12-207ENST00000488591 KRTAP9-3Q9BYQ3 159 aa7.12□□□□□ -1.27
CXCL12-207ENST00000488591 CSAG1Q6PB30 78 aa7.11□□□□□ -1.27
CXCL12-207ENST00000488591 IMUPQ9GZP8 106 aa7.11□□□□□ -1.27
CXCL12-207ENST00000488591 LCA10Q71F78 164 aa7.09□□□□□ -1.27
CXCL12-207ENST00000488591 H3BPC8 53 aa7.06□□□□□ -1.28
CXCL12-207ENST00000488591 MT-ATP8P03928 68 aa7.05□□□□□ -1.28
CXCL12-207ENST00000488591 USH2AO75445 5202 aa7.03□□□□□ -1.28
CXCL12-207ENST00000488591 KLKP1Q107X0 134 aa7.03□□□□□ -1.28
CXCL12-207ENST00000488591 A8MUN3 132 aa7.02□□□□□ -1.29
CXCL12-207ENST00000488591 FAM236AA0A1B0GUQ0 79 aa7□□□□□ -1.29
CXCL12-207ENST00000488591 FAM236BA0A1B0GV22 79 aa7□□□□□ -1.29
CXCL12-207ENST00000488591 SMIM20Q8N5G0 67 aa6.99□□□□□ -1.29
CXCL12-207ENST00000488591 KRTAP9-7A8MTY7 169 aa6.97□□□□□ -1.29
CXCL12-207ENST00000488591 NDUFC1O43677 76 aa6.97□□□□□ -1.29
CXCL12-207ENST00000488591 TRAV7A0A075B6U4 112 aa6.94□□□□□ -1.3
CXCL12-207ENST00000488591 LCE5AQ5TCM9 118 aa6.93□□□□□ -1.3
CXCL12-207ENST00000488591 SSPOA2VEC9 5147 aa6.91□□□□□ -1.3
CXCL12-207ENST00000488591 KRTAP19-4Q3LI73 84 aa6.86□□□□□ -1.31
CXCL12-207ENST00000488591 DMAC1Q96GE9 116 aa6.85□□□□□ -1.31
CXCL12-207ENST00000488591 H0YAA0 97 aa6.82□□□□□ -1.32
CXCL12-207ENST00000488591 CRIPTQ9P021 101 aa6.81□□□□□ -1.32
CXCL12-207ENST00000488591 SPRR2GQ9BYE4 73 aa6.79□□□□□ -1.32
CXCL12-207ENST00000488591 KRTAP19-6Q3LI70 58 aa6.78□□□□□ -1.32
CXCL12-207ENST00000488591 ACYP2P14621 99 aa6.77□□□□□ -1.33
CXCL12-207ENST00000488591 SERP2Q8N6R1 65 aa6.77□□□□□ -1.33
CXCL12-207ENST00000488591 ADM2Q7Z4H4 148 aa6.76□□□□□ -1.33
CXCL12-207ENST00000488591 SNURFQ9Y675 71 aa6.76□□□□□ -1.33
CXCL12-207ENST00000488591 FCGBPQ9Y6R7 5405 aaPredicted RBP6.75□□□□□ -1.33
CXCL12-207ENST00000488591 Q5VV11 94 aa6.74□□□□□ -1.33
CXCL12-207ENST00000488591 C20orf197Q8N268 126 aa6.72□□□□□ -1.33
CXCL12-207ENST00000488591 KRTAP19-8Q3LI54 63 aa6.71□□□□□ -1.34
CXCL12-207ENST00000488591 KRTAP5-3Q6L8H2 238 aa6.7□□□□□ -1.34
CXCL12-207ENST00000488591 SPTSSBQ8NFR3 76 aa6.69□□□□□ -1.34
CXCL12-207ENST00000488591 SPANXA2-OT1Q8N9U9 137 aa6.67□□□□□ -1.34
CXCL12-207ENST00000488591 CHKB-CPT1BH3BT56 60 aa6.66□□□□□ -1.34
CXCL12-207ENST00000488591 MT1BP07438 61 aa6.66□□□□□ -1.34
CXCL12-207ENST00000488591 COX7CP15954 63 aa6.61□□□□□ -1.35
CXCL12-207ENST00000488591 P0C880 135 aa6.6□□□□□ -1.35
CXCL12-207ENST00000488591 R4GN34 69 aa6.6□□□□□ -1.35
CXCL12-207ENST00000488591 A6NN06 94 aa6.58□□□□□ -1.36
CXCL12-207ENST00000488591 MACF1Q9UPN3 7388 aaKnown RBP6.54□□□□□ -1.36
CXCL12-207ENST00000488591 M0QZ58 72 aa6.53□□□□□ -1.36
CXCL12-207ENST00000488591 KRTAP10-5P60370 271 aa6.5□□□□□ -1.37
CXCL12-207ENST00000488591 PLAC4Q8WY50 150 aa6.49□□□□□ -1.37
CXCL12-207ENST00000488591 ANAPC13Q9BS18 74 aa6.49□□□□□ -1.37
CXCL12-207ENST00000488591 COA5Q86WW8 74 aa6.45□□□□□ -1.38
CXCL12-207ENST00000488591 SVIPQ8NHG7 77 aa6.45□□□□□ -1.38
CXCL12-207ENST00000488591 H7BZZ5 65 aa6.44□□□□□ -1.38
CXCL12-207ENST00000488591 LINC01554Q52M75 96 aa6.44□□□□□ -1.38
CXCL12-207ENST00000488591 SYNE2Q8WXH0 6885 aaKnown RBP6.42□□□□□ -1.38
CXCL12-207ENST00000488591 CYSTM1Q9H1C7 97 aa6.41□□□□□ -1.38
CXCL12-207ENST00000488591 PRO2289Q9P1D8 64 aa6.4□□□□□ -1.38
CXCL12-207ENST00000488591 SEC61GP60059 68 aa6.35□□□□□ -1.39
CXCL12-207ENST00000488591 KRTAP6-3Q3LI67 103 aa6.33□□□□□ -1.4
CXCL12-207ENST00000488591 SERP1Q9Y6X1 66 aa6.32□□□□□ -1.4
CXCL12-207ENST00000488591 CCDC179H3BU77 68 aa6.31□□□□□ -1.4
CXCL12-207ENST00000488591 MT1XP80297 61 aa6.3□□□□□ -1.4
CXCL12-207ENST00000488591 ATP5EP56381 51 aaPredicted RBP6.23□□□□□ -1.41
CXCL12-207ENST00000488591 KRTAP13-4Q3LI77 160 aa6.21□□□□□ -1.42
CXCL12-207ENST00000488591 A0A1B0GU33 70 aa6.18□□□□□ -1.42
CXCL12-207ENST00000488591 A0A1B0GU69 56 aa6.16□□□□□ -1.42
CXCL12-207ENST00000488591 KRTAP12-2P59991 146 aa6.14□□□□□ -1.43
CXCL12-207ENST00000488591 TMEM258P61165 79 aa6.12□□□□□ -1.43
CXCL12-207ENST00000488591 SPATA8Q6RVD6 105 aa6.11□□□□□ -1.43
CXCL12-207ENST00000488591 CAMK2N1Q7Z7J9 78 aa6.11□□□□□ -1.43
CXCL12-207ENST00000488591 A0A0D9SG42 100 aa6.1□□□□□ -1.43
CXCL12-207ENST00000488591 KRTAP5-9P26371 169 aa6.1□□□□□ -1.43
CXCL12-207ENST00000488591 KRTAP23-1A1A580 65 aa6.08□□□□□ -1.44
CXCL12-207ENST00000488591 PRR15LQ9BU68 103 aa6.06□□□□□ -1.44
CXCL12-207ENST00000488591 KRTAP8-1Q8IUC2 63 aa6.04□□□□□ -1.44
CXCL12-207ENST00000488591 SPINT4Q6UDR6 99 aa6.03□□□□□ -1.44
CXCL12-207ENST00000488591 SMIM26A0A096LP01 95 aa6.02□□□□□ -1.45
CXCL12-207ENST00000488591 KRTAP10-7P60409 375 aaPredicted RBP6.02□□□□□ -1.45
CXCL12-207ENST00000488591 KMT2DO14686 5537 aa6.01□□□□□ -1.45
CXCL12-207ENST00000488591 NEBP20929 6669 aa6.01□□□□□ -1.45
CXCL12-207ENST00000488591 KRTAP10-12P60413 245 aa6□□□□□ -1.45
CXCL12-207ENST00000488591 MUC12Q9UKN1 5478 aa6□□□□□ -1.45
CXCL12-207ENST00000488591 SPRR2FQ96RM1 72 aa5.99□□□□□ -1.45
CXCL12-207ENST00000488591 LINC01558Q9Y6Z2 57 aa5.99□□□□□ -1.45
CXCL12-207ENST00000488591 KRTAP12-1P59990 96 aa5.95□□□□□ -1.46
CXCL12-207ENST00000488591 A8MU10 97 aa5.91□□□□□ -1.46
CXCL12-207ENST00000488591 MDN1Q9NU22 5596 aa5.9□□□□□ -1.46
CXCL12-207ENST00000488591 SPRR2EP22531 72 aa5.86□□□□□ -1.47
CXCL12-207ENST00000488591 SPRR2BP35325 72 aa5.86□□□□□ -1.47
CXCL12-207ENST00000488591 SPRR2AP35326 72 aa5.86□□□□□ -1.47
CXCL12-207ENST00000488591 UQCR11O14957 56 aa5.84□□□□□ -1.47
CXCL12-207ENST00000488591 V9GYY9 64 aa5.8□□□□□ -1.48
CXCL12-207ENST00000488591 KRTAP20-1Q3LI63 56 aa5.78□□□□□ -1.48
CXCL12-207ENST00000488591 LCE1AQ5T7P2 110 aa5.78□□□□□ -1.48
CXCL12-207ENST00000488591 Q1T7F1 81 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms