RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 PCLOQ9Y6V0 5065 aa10.76□□□□□ -0.69
NECAB3-213ENST00000488489 LPAP08519 4548 aa10.76□□□□□ -0.69
NECAB3-213ENST00000488489 J3QL48 77 aa10.76□□□□□ -0.69
NECAB3-213ENST00000488489 C7orf65Q6ZTY9 151 aa10.76□□□□□ -0.69
NECAB3-213ENST00000488489 RPL37P61927 97 aaKnown RBP10.73□□□□□ -0.69
NECAB3-213ENST00000488489 LRP2P98164 4655 aa10.73□□□□□ -0.69
NECAB3-213ENST00000488489 TPRXLQ17RH7 258 aa10.7□□□□□ -0.7
NECAB3-213ENST00000488489 RBM12B-AS1Q9P1G2 102 aa10.67□□□□□ -0.7
NECAB3-213ENST00000488489 SPATA8Q6RVD6 105 aa10.66□□□□□ -0.7
NECAB3-213ENST00000488489 UQCR11O14957 56 aa10.6□□□□□ -0.71
NECAB3-213ENST00000488489 MIR22HGQ0VDD5 57 aa10.57□□□□□ -0.72
NECAB3-213ENST00000488489 HERC1Q15751 4861 aa10.56□□□□□ -0.72
NECAB3-213ENST00000488489 KRTAP3-1Q9BYR8 98 aa10.48□□□□□ -0.73
NECAB3-213ENST00000488489 PRAC1Q96KF2 57 aa10.4□□□□□ -0.74
NECAB3-213ENST00000488489 COX6B2Q6YFQ2 88 aa10.39□□□□□ -0.75
NECAB3-213ENST00000488489 HMCN2Q8NDA2 5059 aa10.38□□□□□ -0.75
NECAB3-213ENST00000488489 ADM2Q7Z4H4 148 aa10.37□□□□□ -0.75
NECAB3-213ENST00000488489 SEC61BP60468 96 aaKnown RBP10.3□□□□□ -0.76
NECAB3-213ENST00000488489 MUC17Q685J3 4493 aa10.27□□□□□ -0.77
NECAB3-213ENST00000488489 KRTAP4-1Q9BYQ7 146 aa10.22□□□□□ -0.77
NECAB3-213ENST00000488489 H0YAA0 97 aa10.22□□□□□ -0.77
NECAB3-213ENST00000488489 MUC2Q02817 5179 aa10.19□□□□□ -0.78
NECAB3-213ENST00000488489 A0A1B0GU33 70 aa10.15□□□□□ -0.78
NECAB3-213ENST00000488489 H1FX-AS1Q4G0G2 97 aa10.13□□□□□ -0.79
NECAB3-213ENST00000488489 LINC01554Q52M75 96 aa10.13□□□□□ -0.79
NECAB3-213ENST00000488489 CSAG1Q6PB30 78 aa10.1□□□□□ -0.79
NECAB3-213ENST00000488489 KRTAP3-3Q9BYR6 98 aa10.09□□□□□ -0.79
NECAB3-213ENST00000488489 S4R3F8 94 aa10.04□□□□□ -0.8
NECAB3-213ENST00000488489 UBR4Q5T4S7 5183 aa9.98□□□□□ -0.81
NECAB3-213ENST00000488489 KRTAP19-2Q3LHN2 52 aa9.96□□□□□ -0.82
NECAB3-213ENST00000488489 RNF213Q63HN8 5207 aa9.88□□□□□ -0.83
NECAB3-213ENST00000488489 K7ERS5 55 aa9.86□□□□□ -0.83
NECAB3-213ENST00000488489 KRTAP25-1Q3LHN0 102 aa9.85□□□□□ -0.83
NECAB3-213ENST00000488489 FLGP20930 4061 aaPredicted RBP9.81□□□□□ -0.84
NECAB3-213ENST00000488489 KRTAP10-6P60371 365 aaPredicted RBP9.81□□□□□ -0.84
NECAB3-213ENST00000488489 KRTAP3-2Q9BYR7 98 aa9.76□□□□□ -0.85
NECAB3-213ENST00000488489 FAT4Q6V0I7 4981 aa9.73□□□□□ -0.85
NECAB3-213ENST00000488489 KRTAP13-4Q3LI77 160 aa9.71□□□□□ -0.85
NECAB3-213ENST00000488489 P0C880 135 aa9.67□□□□□ -0.86
NECAB3-213ENST00000488489 LCE2CQ5TA81 110 aa9.67□□□□□ -0.86
NECAB3-213ENST00000488489 ROMO1P60602 79 aa9.66□□□□□ -0.86
NECAB3-213ENST00000488489 A0A0D9SG42 100 aa9.61□□□□□ -0.87
NECAB3-213ENST00000488489 CRIPTQ9P021 101 aa9.6□□□□□ -0.87
NECAB3-213ENST00000488489 MT1HP80294 61 aa9.44□□□□□ -0.9
NECAB3-213ENST00000488489 KRTAP12-2P59991 146 aa9.4□□□□□ -0.9
NECAB3-213ENST00000488489 LORP23490 312 aaPredicted RBP9.39□□□□□ -0.91
NECAB3-213ENST00000488489 KRTAP12-1P59990 96 aa9.35□□□□□ -0.91
NECAB3-213ENST00000488489 M0QZ58 72 aa9.32□□□□□ -0.92
NECAB3-213ENST00000488489 M0R2T5 61 aa9.32□□□□□ -0.92
NECAB3-213ENST00000488489 H3BS24 57 aa9.3□□□□□ -0.92
NECAB3-213ENST00000488489 SPINT4Q6UDR6 99 aa9.29□□□□□ -0.92
NECAB3-213ENST00000488489 C10orf95Q9H7T3 257 aa9.28□□□□□ -0.92
NECAB3-213ENST00000488489 R4GN34 69 aa9.28□□□□□ -0.92
NECAB3-213ENST00000488489 KRTAP9-8Q9BYQ0 159 aa9.13□□□□□ -0.95
NECAB3-213ENST00000488489 MT2AP02795 61 aa9.1□□□□□ -0.95
NECAB3-213ENST00000488489 MT1FP04733 61 aa9.07□□□□□ -0.96
NECAB3-213ENST00000488489 KRTAP15-1Q3LI76 137 aa9.01□□□□□ -0.97
NECAB3-213ENST00000488489 KRTAP10-10P60014 251 aa9.01□□□□□ -0.97
NECAB3-213ENST00000488489 LCE2AQ5TA79 106 aaPredicted RBP8.99□□□□□ -0.97
NECAB3-213ENST00000488489 KRTAP19-1Q8IUB9 90 aa8.96□□□□□ -0.98
NECAB3-213ENST00000488489 SPRR2GQ9BYE4 73 aa8.95□□□□□ -0.98
NECAB3-213ENST00000488489 KRTAP9-3Q9BYQ3 159 aa8.78□□□□□ -1
NECAB3-213ENST00000488489 NDUFAF8A1L188 74 aa8.77□□□□□ -1.01
NECAB3-213ENST00000488489 CAMK2N1Q7Z7J9 78 aa8.69□□□□□ -1.02
NECAB3-213ENST00000488489 KRTAP19-8Q3LI54 63 aa8.68□□□□□ -1.02
NECAB3-213ENST00000488489 PLAC4Q8WY50 150 aa8.63□□□□□ -1.03
NECAB3-213ENST00000488489 MT1BP07438 61 aa8.6□□□□□ -1.03
NECAB3-213ENST00000488489 PP632Q6XCG6 107 aa8.56□□□□□ -1.04
NECAB3-213ENST00000488489 LCE2BO14633 110 aa8.54□□□□□ -1.04
NECAB3-213ENST00000488489 USH2AO75445 5202 aa8.46□□□□□ -1.06
NECAB3-213ENST00000488489 MT1XP80297 61 aa8.36□□□□□ -1.07
NECAB3-213ENST00000488489 KRTAP10-5P60370 271 aa8.35□□□□□ -1.07
NECAB3-213ENST00000488489 TNP1P09430 55 aa8.3□□□□□ -1.08
NECAB3-213ENST00000488489 KRTAP23-1A1A580 65 aa8.27□□□□□ -1.08
NECAB3-213ENST00000488489 LUZP6Q538Z0 58 aa8.18□□□□□ -1.1
NECAB3-213ENST00000488489 FSIP2Q5CZC0 6907 aa8.16□□□□□ -1.1
NECAB3-213ENST00000488489 PRO2289Q9P1D8 64 aa8.14□□□□□ -1.11
NECAB3-213ENST00000488489 SSPOA2VEC9 5147 aa8.13□□□□□ -1.11
NECAB3-213ENST00000488489 LCE2DQ5TA82 110 aaPredicted RBP8.12□□□□□ -1.11
NECAB3-213ENST00000488489 KRTAP10-7P60409 375 aaPredicted RBP8.06□□□□□ -1.12
NECAB3-213ENST00000488489 SPRR5A0A1B0GTR4 108 aa8.03□□□□□ -1.12
NECAB3-213ENST00000488489 LCE3AQ5TA76 89 aa7.97□□□□□ -1.13
NECAB3-213ENST00000488489 KRTAP10-12P60413 245 aa7.93□□□□□ -1.14
NECAB3-213ENST00000488489 KRTAP19-6Q3LI70 58 aa7.91□□□□□ -1.14
NECAB3-213ENST00000488489 KMT2DO14686 5537 aa7.9□□□□□ -1.15
NECAB3-213ENST00000488489 KRTAP9-2Q9BYQ4 174 aa7.9□□□□□ -1.15
NECAB3-213ENST00000488489 A0A0A0MQY5 61 aa7.84□□□□□ -1.16
NECAB3-213ENST00000488489 KRTAP8-1Q8IUC2 63 aa7.78□□□□□ -1.16
NECAB3-213ENST00000488489 FCGBPQ9Y6R7 5405 aaPredicted RBP7.75□□□□□ -1.17
NECAB3-213ENST00000488489 KRTAP4-8A0A0G2JLE6 195 aa7.74□□□□□ -1.17
NECAB3-213ENST00000488489 KRTAP4-8Q9BYQ9 185 aa7.74□□□□□ -1.17
NECAB3-213ENST00000488489 KRTAP12-3P60328 96 aa7.63□□□□□ -1.19
NECAB3-213ENST00000488489 CRCT1Q9UGL9 99 aa7.58□□□□□ -1.2
NECAB3-213ENST00000488489 KRTAP19-5Q3LI72 72 aa7.58□□□□□ -1.2
NECAB3-213ENST00000488489 KRTAP19-7Q3SYF9 63 aa7.46□□□□□ -1.21
NECAB3-213ENST00000488489 MACF1Q9UPN3 7388 aaKnown RBP7.4□□□□□ -1.22
NECAB3-213ENST00000488489 MT1EP04732 61 aa7.3□□□□□ -1.24
NECAB3-213ENST00000488489 KRTAP9-6A0A140TA67 174 aa7.26□□□□□ -1.25
NECAB3-213ENST00000488489 SYNE2Q8WXH0 6885 aaKnown RBP7.24□□□□□ -1.25
NECAB3-213ENST00000488489 MUC12Q9UKN1 5478 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms