RNA–Protein interactions for RNA: ENST00000488459.1

HUWE1-212, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene HUWE1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-212ENST00000488459 S4R3F8 94 aa5.69□□□□□ -1.5
HUWE1-212ENST00000488459 LRP2P98164 4655 aa5.67□□□□□ -1.5
HUWE1-212ENST00000488459 A0A1B0GU69 56 aa5.66□□□□□ -1.5
HUWE1-212ENST00000488459 LCA10Q71F78 164 aa5.65□□□□□ -1.5
HUWE1-212ENST00000488459 SEC61GP60059 68 aa5.64□□□□□ -1.51
HUWE1-212ENST00000488459 Q5VV11 94 aa5.64□□□□□ -1.51
HUWE1-212ENST00000488459 KRTAP3-3Q9BYR6 98 aa5.59□□□□□ -1.51
HUWE1-212ENST00000488459 A6NED7 52 aa5.58□□□□□ -1.52
HUWE1-212ENST00000488459 HERC1Q15751 4861 aa5.57□□□□□ -1.52
HUWE1-212ENST00000488459 HMCN2Q8NDA2 5059 aa5.57□□□□□ -1.52
HUWE1-212ENST00000488459 CSAG1Q6PB30 78 aa5.56□□□□□ -1.52
HUWE1-212ENST00000488459 BRK1Q8WUW1 75 aa5.56□□□□□ -1.52
HUWE1-212ENST00000488459 MUC17Q685J3 4493 aa5.55□□□□□ -1.52
HUWE1-212ENST00000488459 A0A1B0GU33 70 aa5.47□□□□□ -1.53
HUWE1-212ENST00000488459 UQCR11O14957 56 aa5.47□□□□□ -1.53
HUWE1-212ENST00000488459 KRTAP19-2Q3LHN2 52 aa5.47□□□□□ -1.53
HUWE1-212ENST00000488459 ADM2Q7Z4H4 148 aa5.47□□□□□ -1.53
HUWE1-212ENST00000488459 KRTAP3-2Q9BYR7 98 aa5.47□□□□□ -1.53
HUWE1-212ENST00000488459 LCE2DQ5TA82 110 aaPredicted RBP5.46□□□□□ -1.54
HUWE1-212ENST00000488459 MIR22HGQ0VDD5 57 aa5.44□□□□□ -1.54
HUWE1-212ENST00000488459 A8MU10 97 aa5.42□□□□□ -1.54
HUWE1-212ENST00000488459 CDC42SE1Q9NRR8 79 aa5.42□□□□□ -1.54
HUWE1-212ENST00000488459 KRTAP10-6P60371 365 aaPredicted RBP5.41□□□□□ -1.54
HUWE1-212ENST00000488459 P0C880 135 aa5.4□□□□□ -1.54
HUWE1-212ENST00000488459 PRO0628Q9UI54 55 aa5.4□□□□□ -1.54
HUWE1-212ENST00000488459 SPATA8Q6RVD6 105 aa5.39□□□□□ -1.55
HUWE1-212ENST00000488459 LCE2CQ5TA81 110 aa5.37□□□□□ -1.55
HUWE1-212ENST00000488459 M0R2T5 61 aa5.35□□□□□ -1.55
HUWE1-212ENST00000488459 H0YAA0 97 aa5.34□□□□□ -1.55
HUWE1-212ENST00000488459 RNF213Q63HN8 5207 aa5.3□□□□□ -1.56
HUWE1-212ENST00000488459 A0A0D9SG42 100 aa5.3□□□□□ -1.56
HUWE1-212ENST00000488459 UBR4Q5T4S7 5183 aa5.29□□□□□ -1.56
HUWE1-212ENST00000488459 KRTAP13-4Q3LI77 160 aa5.29□□□□□ -1.56
HUWE1-212ENST00000488459 MT1HP80294 61 aa5.28□□□□□ -1.56
HUWE1-212ENST00000488459 MUC2Q02817 5179 aa5.27□□□□□ -1.57
HUWE1-212ENST00000488459 M0QZ58 72 aa5.26□□□□□ -1.57
HUWE1-212ENST00000488459 PMAIP1Q13794 54 aa5.25□□□□□ -1.57
HUWE1-212ENST00000488459 R4GN34 69 aa5.24□□□□□ -1.57
HUWE1-212ENST00000488459 K7ERS5 55 aa5.22□□□□□ -1.57
HUWE1-212ENST00000488459 LORP23490 312 aaPredicted RBP5.22□□□□□ -1.57
HUWE1-212ENST00000488459 LINC01554Q52M75 96 aa5.22□□□□□ -1.57
HUWE1-212ENST00000488459 FLGP20930 4061 aaPredicted RBP5.18□□□□□ -1.58
HUWE1-212ENST00000488459 SPINT4Q6UDR6 99 aa5.17□□□□□ -1.58
HUWE1-212ENST00000488459 A6NN06 94 aa5.15□□□□□ -1.59
HUWE1-212ENST00000488459 FAT4Q6V0I7 4981 aa5.13□□□□□ -1.59
HUWE1-212ENST00000488459 CRIPTQ9P021 101 aa5.13□□□□□ -1.59
HUWE1-212ENST00000488459 KRTAP10-10P60014 251 aa5.12□□□□□ -1.59
HUWE1-212ENST00000488459 MT2AP02795 61 aa5.1□□□□□ -1.59
HUWE1-212ENST00000488459 KRTAP12-2P59991 146 aa5.1□□□□□ -1.59
HUWE1-212ENST00000488459 KRTAP12-1P59990 96 aa5.09□□□□□ -1.59
HUWE1-212ENST00000488459 KRTAP9-8Q9BYQ0 159 aa5.07□□□□□ -1.6
HUWE1-212ENST00000488459 MT1FP04733 61 aa5.06□□□□□ -1.6
HUWE1-212ENST00000488459 KTN1-AS1Q86SY8 53 aa4.99□□□□□ -1.61
HUWE1-212ENST00000488459 ROMO1P60602 79 aa4.98□□□□□ -1.61
HUWE1-212ENST00000488459 LCE2AQ5TA79 106 aaPredicted RBP4.97□□□□□ -1.61
HUWE1-212ENST00000488459 CAMK2N1Q7Z7J9 78 aa4.97□□□□□ -1.61
HUWE1-212ENST00000488459 KRTAP19-1Q8IUB9 90 aa4.97□□□□□ -1.61
HUWE1-212ENST00000488459 SPRR2GQ9BYE4 73 aa4.97□□□□□ -1.61
HUWE1-212ENST00000488459 PLAC4Q8WY50 150 aa4.94□□□□□ -1.62
HUWE1-212ENST00000488459 PRAC1Q96KF2 57 aa4.94□□□□□ -1.62
HUWE1-212ENST00000488459 KRTAP9-3Q9BYQ3 159 aa4.89□□□□□ -1.63
HUWE1-212ENST00000488459 KRTAP19-8Q3LI54 63 aa4.85□□□□□ -1.63
HUWE1-212ENST00000488459 C10orf95Q9H7T3 257 aa4.83□□□□□ -1.64
HUWE1-212ENST00000488459 MT1BP07438 61 aa4.79□□□□□ -1.64
HUWE1-212ENST00000488459 KRTAP25-1Q3LHN0 102 aa4.76□□□□□ -1.65
HUWE1-212ENST00000488459 LCE2BO14633 110 aa4.75□□□□□ -1.65
HUWE1-212ENST00000488459 H3BS24 57 aa4.73□□□□□ -1.65
HUWE1-212ENST00000488459 TNP1P09430 55 aa4.69□□□□□ -1.66
HUWE1-212ENST00000488459 KRTAP10-5P60370 271 aa4.64□□□□□ -1.67
HUWE1-212ENST00000488459 MT1XP80297 61 aa4.64□□□□□ -1.67
HUWE1-212ENST00000488459 PRO2289Q9P1D8 64 aa4.64□□□□□ -1.67
HUWE1-212ENST00000488459 A0A0A0MQY5 61 aa4.61□□□□□ -1.67
HUWE1-212ENST00000488459 KRTAP9-6A0A140TA67 174 aa4.61□□□□□ -1.67
HUWE1-212ENST00000488459 KRTAP9-2Q9BYQ4 174 aa4.56□□□□□ -1.68
HUWE1-212ENST00000488459 PP632Q6XCG6 107 aa4.54□□□□□ -1.68
HUWE1-212ENST00000488459 USH2AO75445 5202 aa4.51□□□□□ -1.69
HUWE1-212ENST00000488459 KRTAP10-7P60409 375 aaPredicted RBP4.49□□□□□ -1.69
HUWE1-212ENST00000488459 KRTAP23-1A1A580 65 aa4.48□□□□□ -1.69
HUWE1-212ENST00000488459 LCE3AQ5TA76 89 aa4.47□□□□□ -1.69
HUWE1-212ENST00000488459 KRTAP10-12P60413 245 aa4.46□□□□□ -1.7
HUWE1-212ENST00000488459 KRTAP19-6Q3LI70 58 aa4.42□□□□□ -1.7
HUWE1-212ENST00000488459 SSPOA2VEC9 5147 aa4.34□□□□□ -1.71
HUWE1-212ENST00000488459 KRTAP8-1Q8IUC2 63 aa4.32□□□□□ -1.72
HUWE1-212ENST00000488459 KRTAP4-8A0A0G2JLE6 195 aa4.31□□□□□ -1.72
HUWE1-212ENST00000488459 KRTAP4-8Q9BYQ9 185 aa4.31□□□□□ -1.72
HUWE1-212ENST00000488459 KRTAP12-3P60328 96 aa4.29□□□□□ -1.72
HUWE1-212ENST00000488459 KRTAP19-5Q3LI72 72 aa4.27□□□□□ -1.73
HUWE1-212ENST00000488459 FSIP2Q5CZC0 6907 aa4.27□□□□□ -1.73
HUWE1-212ENST00000488459 CRCT1Q9UGL9 99 aa4.22□□□□□ -1.73
HUWE1-212ENST00000488459 KRTAP15-1Q3LI76 137 aa4.21□□□□□ -1.74
HUWE1-212ENST00000488459 FCGBPQ9Y6R7 5405 aaPredicted RBP4.15□□□□□ -1.75
HUWE1-212ENST00000488459 KRTAP19-7Q3SYF9 63 aa4.13□□□□□ -1.75
HUWE1-212ENST00000488459 KRTAP9-7A8MTY7 169 aa4.08□□□□□ -1.76
HUWE1-212ENST00000488459 KMT2DO14686 5537 aa4.08□□□□□ -1.76
HUWE1-212ENST00000488459 MT1EP04732 61 aa4.07□□□□□ -1.76
HUWE1-212ENST00000488459 LUZP6Q538Z0 58 aa4.01□□□□□ -1.77
HUWE1-212ENST00000488459 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
HUWE1-212ENST00000488459 MT1LQ93083 61 aa4.01□□□□□ -1.77
HUWE1-212ENST00000488459 SPRR2FQ96RM1 72 aa4□□□□□ -1.77
HUWE1-212ENST00000488459 SPRR5A0A1B0GTR4 108 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms