RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 ATOX1O00244 68 aa1.37□□□□□ -2.19
LINC00888-204ENST00000487386 NDUFB1O75438 58 aa1.37□□□□□ -2.19
LINC00888-204ENST00000487386 SCGB1A1P11684 91 aa1.37□□□□□ -2.19
LINC00888-204ENST00000487386 CD164Q04900 197 aa1.37□□□□□ -2.19
LINC00888-204ENST00000487386 RETNLBQ9BQ08 111 aa1.37□□□□□ -2.19
LINC00888-204ENST00000487386 ANAPC13Q9BS18 74 aa1.37□□□□□ -2.19
LINC00888-204ENST00000487386 MMP24-AS1A0A0U1RRL7 71 aa1.36□□□□□ -2.19
LINC00888-204ENST00000487386 NDUFS5O43920 106 aa1.36□□□□□ -2.19
LINC00888-204ENST00000487386 SPINK1P00995 79 aa1.36□□□□□ -2.19
LINC00888-204ENST00000487386 RPS29P62273 56 aaKnown RBP1.36□□□□□ -2.19
LINC00888-204ENST00000487386 SPAG11AQ6PDA7 123 aa1.36□□□□□ -2.19
LINC00888-204ENST00000487386 CASC2Q6XLA1 102 aa1.36□□□□□ -2.19
LINC00888-204ENST00000487386 SSBP3-AS1Q7Z2R9 100 aa1.36□□□□□ -2.19
LINC00888-204ENST00000487386 Q96NJ1 140 aa1.36□□□□□ -2.19
LINC00888-204ENST00000487386 ABCA13Q86UQ4 5058 aa1.36□□□□□ -2.19
LINC00888-204ENST00000487386 FAT1Q14517 4588 aa1.35□□□□□ -2.19
LINC00888-204ENST00000487386 C9orf92A6NGG3 77 aa1.35□□□□□ -2.19
LINC00888-204ENST00000487386 C8orf87E5RJ46 101 aa1.35□□□□□ -2.19
LINC00888-204ENST00000487386 IMUPQ9GZP8 106 aa1.35□□□□□ -2.19
LINC00888-204ENST00000487386 TRAV22A0A0B4J277 110 aa1.34□□□□□ -2.19
LINC00888-204ENST00000487386 hDV103S1A0JD37 113 aa1.34□□□□□ -2.19
LINC00888-204ENST00000487386 ASB16-AS1Q495Z4 193 aa1.34□□□□□ -2.19
LINC00888-204ENST00000487386 C1orf195Q5TG92 126 aa1.34□□□□□ -2.19
LINC00888-204ENST00000487386 PRR15Q8IV56 129 aa1.34□□□□□ -2.19
LINC00888-204ENST00000487386 TMEM254Q8TBM7 123 aa1.34□□□□□ -2.19
LINC00888-204ENST00000487386 C20orf166-AS1Q96NR2 134 aa1.34□□□□□ -2.19
LINC00888-204ENST00000487386 LINC00472Q9H8W2 130 aa1.34□□□□□ -2.19
LINC00888-204ENST00000487386 FAT3Q8TDW7 4589 aa1.33□□□□□ -2.2
LINC00888-204ENST00000487386 H0Y9P7 68 aa1.33□□□□□ -2.2
LINC00888-204ENST00000487386 PCOTHQ58A44 107 aa1.33□□□□□ -2.2
LINC00888-204ENST00000487386 Q5XG85 94 aa1.33□□□□□ -2.2
LINC00888-204ENST00000487386 C20orf197Q8N268 126 aa1.33□□□□□ -2.2
LINC00888-204ENST00000487386 SMIM20Q8N5G0 67 aa1.33□□□□□ -2.2
LINC00888-204ENST00000487386 MRPL34Q9BQ48 92 aaKnown RBP1.33□□□□□ -2.2
LINC00888-204ENST00000487386 PCLOQ9Y6V0 5065 aa1.33□□□□□ -2.2
LINC00888-204ENST00000487386 VPS13BQ7Z7G8 4022 aa1.32□□□□□ -2.2
LINC00888-204ENST00000487386 TRAV7A0A075B6U4 112 aa1.32□□□□□ -2.2
LINC00888-204ENST00000487386 UQCRQO14949 82 aa1.32□□□□□ -2.2
LINC00888-204ENST00000487386 MT1HL1P0DM35 61 aa1.32□□□□□ -2.2
LINC00888-204ENST00000487386 COX7CP15954 63 aa1.32□□□□□ -2.2
LINC00888-204ENST00000487386 MP68P56378 58 aa1.32□□□□□ -2.2
LINC00888-204ENST00000487386 FP248Q71RG6 208 aaPredicted RBP1.32□□□□□ -2.2
LINC00888-204ENST00000487386 SERP2Q8N6R1 65 aa1.32□□□□□ -2.2
LINC00888-204ENST00000487386 SNURFQ9Y675 71 aa1.32□□□□□ -2.2
LINC00888-204ENST00000487386 FAM236DA0A1B0GTK5 79 aa1.31□□□□□ -2.2
LINC00888-204ENST00000487386 CCDC179H3BU77 68 aa1.31□□□□□ -2.2
LINC00888-204ENST00000487386 FAM236CP0DP71 79 aa1.31□□□□□ -2.2
LINC00888-204ENST00000487386 LINC00313P59037 77 aa1.31□□□□□ -2.2
LINC00888-204ENST00000487386 C7orf65Q6ZTY9 151 aa1.31□□□□□ -2.2
LINC00888-204ENST00000487386 MYCBP2O75592 4640 aa1.31□□□□□ -2.2
LINC00888-204ENST00000487386 A0A1B0GU33 70 aa1.3□□□□□ -2.2
LINC00888-204ENST00000487386 TPRXLQ17RH7 258 aa1.3□□□□□ -2.2
LINC00888-204ENST00000487386 LINC00208Q96KT6 92 aa1.3□□□□□ -2.2
LINC00888-204ENST00000487386 TP53AIP1Q9HCN2 124 aa1.3□□□□□ -2.2
LINC00888-204ENST00000487386 FLG2Q5D862 2391 aaPredicted RBP1.29□□□□□ -2.2
LINC00888-204ENST00000487386 LOC101927531A0A1B0GV80 90 aa1.29□□□□□ -2.2
LINC00888-204ENST00000487386 ATP5EP56381 51 aaPredicted RBP1.29□□□□□ -2.2
LINC00888-204ENST00000487386 TMEM258P61165 79 aa1.29□□□□□ -2.2
LINC00888-204ENST00000487386 RPL37P61927 97 aaKnown RBP1.29□□□□□ -2.2
LINC00888-204ENST00000487386 KLKP1Q107X0 134 aa1.29□□□□□ -2.2
LINC00888-204ENST00000487386 CYSTM1Q9H1C7 97 aa1.29□□□□□ -2.2
LINC00888-204ENST00000487386 LRP1Q07954 4544 aaKnown RBP1.29□□□□□ -2.2
LINC00888-204ENST00000487386 TNXBP22105 4242 aa1.28□□□□□ -2.2
LINC00888-204ENST00000487386 H3BPC8 53 aa1.28□□□□□ -2.2
LINC00888-204ENST00000487386 NDUFC1O43677 76 aa1.28□□□□□ -2.2
LINC00888-204ENST00000487386 SRRM2Q9UQ35 2752 aaKnown RBP1.28□□□□□ -2.2
LINC00888-204ENST00000487386 H7BZZ5 65 aa1.27□□□□□ -2.21
LINC00888-204ENST00000487386 ATP11AUNQ6ZP68 121 aa1.27□□□□□ -2.21
LINC00888-204ENST00000487386 PRO0628Q9UI54 55 aa1.27□□□□□ -2.21
LINC00888-204ENST00000487386 HMCN2Q8NDA2 5059 aa1.26□□□□□ -2.21
LINC00888-204ENST00000487386 HERC1Q15751 4861 aa1.26□□□□□ -2.21
LINC00888-204ENST00000487386 CHKB-CPT1BH3BT56 60 aa1.26□□□□□ -2.21
LINC00888-204ENST00000487386 DMBT1Q9UGM3 2413 aaPredicted RBP1.25□□□□□ -2.21
LINC00888-204ENST00000487386 K7ERS5 55 aa1.24□□□□□ -2.21
LINC00888-204ENST00000487386 SPINK7P58062 85 aa1.24□□□□□ -2.21
LINC00888-204ENST00000487386 C4orf26Q17RF5 130 aa1.24□□□□□ -2.21
LINC00888-204ENST00000487386 COA5Q86WW8 74 aa1.24□□□□□ -2.21
LINC00888-204ENST00000487386 DMAC1Q96GE9 116 aa1.24□□□□□ -2.21
LINC00888-204ENST00000487386 CYP4F30PQ9H0H9 118 aa1.24□□□□□ -2.21
LINC00888-204ENST00000487386 SERP1Q9Y6X1 66 aa1.24□□□□□ -2.21
LINC00888-204ENST00000487386 COX6B2Q6YFQ2 88 aa1.23□□□□□ -2.21
LINC00888-204ENST00000487386 RBM12B-AS1Q9P1G2 102 aa1.23□□□□□ -2.21
LINC00888-204ENST00000487386 A8MUN3 132 aa1.22□□□□□ -2.21
LINC00888-204ENST00000487386 S4R3F8 94 aa1.22□□□□□ -2.21
LINC00888-204ENST00000487386 ACYP2P14621 99 aa1.21□□□□□ -2.22
LINC00888-204ENST00000487386 LPAP08519 4548 aa1.21□□□□□ -2.22
LINC00888-204ENST00000487386 LRP2P98164 4655 aa1.2□□□□□ -2.22
LINC00888-204ENST00000487386 SPTSSBQ8NFR3 76 aa1.2□□□□□ -2.22
LINC00888-204ENST00000487386 PRR15LQ9BU68 103 aa1.2□□□□□ -2.22
LINC00888-204ENST00000487386 MUC17Q685J3 4493 aa1.19□□□□□ -2.22
LINC00888-204ENST00000487386 UBR4Q5T4S7 5183 aa1.19□□□□□ -2.22
LINC00888-204ENST00000487386 LCA10Q71F78 164 aa1.19□□□□□ -2.22
LINC00888-204ENST00000487386 RNF213Q63HN8 5207 aa1.18□□□□□ -2.22
LINC00888-204ENST00000487386 A0A1B0GU69 56 aa1.18□□□□□ -2.22
LINC00888-204ENST00000487386 H1FX-AS1Q4G0G2 97 aa1.18□□□□□ -2.22
LINC00888-204ENST00000487386 V9GYY9 64 aa1.18□□□□□ -2.22
LINC00888-204ENST00000487386 M0R2T5 61 aa1.17□□□□□ -2.22
LINC00888-204ENST00000487386 A6NED7 52 aa1.15□□□□□ -2.23
LINC00888-204ENST00000487386 RPS28P62857 69 aaKnown RBP1.15□□□□□ -2.23
LINC00888-204ENST00000487386 BRK1Q8WUW1 75 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms