RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 ATOX1O00244 68 aa1.37□□□□□ -2.19
LINC00888-204ENST00000487386 NDUFB1O75438 58 aa1.37□□□□□ -2.19
LINC00888-204ENST00000487386 SCGB1A1P11684 91 aa1.37□□□□□ -2.19
LINC00888-204ENST00000487386 CD164Q04900 197 aa1.37□□□□□ -2.19
LINC00888-204ENST00000487386 RETNLBQ9BQ08 111 aa1.37□□□□□ -2.19
LINC00888-204ENST00000487386 ANAPC13Q9BS18 74 aa1.37□□□□□ -2.19
LINC00888-204ENST00000487386 MMP24-AS1A0A0U1RRL7 71 aa1.36□□□□□ -2.19
LINC00888-204ENST00000487386 NDUFS5O43920 106 aa1.36□□□□□ -2.19
LINC00888-204ENST00000487386 SPINK1P00995 79 aa1.36□□□□□ -2.19
LINC00888-204ENST00000487386 RPS29P62273 56 aaKnown RBP1.36□□□□□ -2.19
LINC00888-204ENST00000487386 SPAG11AQ6PDA7 123 aa1.36□□□□□ -2.19
LINC00888-204ENST00000487386 CASC2Q6XLA1 102 aa1.36□□□□□ -2.19
LINC00888-204ENST00000487386 SSBP3-AS1Q7Z2R9 100 aa1.36□□□□□ -2.19
LINC00888-204ENST00000487386 Q96NJ1 140 aa1.36□□□□□ -2.19
LINC00888-204ENST00000487386 ABCA13Q86UQ4 5058 aa1.36□□□□□ -2.19
LINC00888-204ENST00000487386 FAT1Q14517 4588 aa1.35□□□□□ -2.19
LINC00888-204ENST00000487386 C9orf92A6NGG3 77 aa1.35□□□□□ -2.19
LINC00888-204ENST00000487386 C8orf87E5RJ46 101 aa1.35□□□□□ -2.19
LINC00888-204ENST00000487386 IMUPQ9GZP8 106 aa1.35□□□□□ -2.19
LINC00888-204ENST00000487386 TRAV22A0A0B4J277 110 aa1.34□□□□□ -2.19
LINC00888-204ENST00000487386 hDV103S1A0JD37 113 aa1.34□□□□□ -2.19
LINC00888-204ENST00000487386 ASB16-AS1Q495Z4 193 aa1.34□□□□□ -2.19
LINC00888-204ENST00000487386 C1orf195Q5TG92 126 aa1.34□□□□□ -2.19
LINC00888-204ENST00000487386 PRR15Q8IV56 129 aa1.34□□□□□ -2.19
LINC00888-204ENST00000487386 TMEM254Q8TBM7 123 aa1.34□□□□□ -2.19
LINC00888-204ENST00000487386 C20orf166-AS1Q96NR2 134 aa1.34□□□□□ -2.19
LINC00888-204ENST00000487386 LINC00472Q9H8W2 130 aa1.34□□□□□ -2.19
LINC00888-204ENST00000487386 FAT3Q8TDW7 4589 aa1.33□□□□□ -2.2
LINC00888-204ENST00000487386 H0Y9P7 68 aa1.33□□□□□ -2.2
LINC00888-204ENST00000487386 PCOTHQ58A44 107 aa1.33□□□□□ -2.2
LINC00888-204ENST00000487386 Q5XG85 94 aa1.33□□□□□ -2.2
LINC00888-204ENST00000487386 C20orf197Q8N268 126 aa1.33□□□□□ -2.2
LINC00888-204ENST00000487386 SMIM20Q8N5G0 67 aa1.33□□□□□ -2.2
LINC00888-204ENST00000487386 MRPL34Q9BQ48 92 aaKnown RBP1.33□□□□□ -2.2
LINC00888-204ENST00000487386 PCLOQ9Y6V0 5065 aa1.33□□□□□ -2.2
LINC00888-204ENST00000487386 VPS13BQ7Z7G8 4022 aa1.32□□□□□ -2.2
LINC00888-204ENST00000487386 TRAV7A0A075B6U4 112 aa1.32□□□□□ -2.2
LINC00888-204ENST00000487386 UQCRQO14949 82 aa1.32□□□□□ -2.2
LINC00888-204ENST00000487386 MT1HL1P0DM35 61 aa1.32□□□□□ -2.2
LINC00888-204ENST00000487386 COX7CP15954 63 aa1.32□□□□□ -2.2
LINC00888-204ENST00000487386 MP68P56378 58 aa1.32□□□□□ -2.2
LINC00888-204ENST00000487386 FP248Q71RG6 208 aaPredicted RBP1.32□□□□□ -2.2
LINC00888-204ENST00000487386 SERP2Q8N6R1 65 aa1.32□□□□□ -2.2
LINC00888-204ENST00000487386 SNURFQ9Y675 71 aa1.32□□□□□ -2.2
LINC00888-204ENST00000487386 FAM236DA0A1B0GTK5 79 aa1.31□□□□□ -2.2
LINC00888-204ENST00000487386 CCDC179H3BU77 68 aa1.31□□□□□ -2.2
LINC00888-204ENST00000487386 FAM236CP0DP71 79 aa1.31□□□□□ -2.2
LINC00888-204ENST00000487386 LINC00313P59037 77 aa1.31□□□□□ -2.2
LINC00888-204ENST00000487386 C7orf65Q6ZTY9 151 aa1.31□□□□□ -2.2
LINC00888-204ENST00000487386 MYCBP2O75592 4640 aa1.31□□□□□ -2.2
LINC00888-204ENST00000487386 A0A1B0GU33 70 aa1.3□□□□□ -2.2
LINC00888-204ENST00000487386 TPRXLQ17RH7 258 aa1.3□□□□□ -2.2
LINC00888-204ENST00000487386 LINC00208Q96KT6 92 aa1.3□□□□□ -2.2
LINC00888-204ENST00000487386 TP53AIP1Q9HCN2 124 aa1.3□□□□□ -2.2
LINC00888-204ENST00000487386 FLG2Q5D862 2391 aaPredicted RBP1.29□□□□□ -2.2
LINC00888-204ENST00000487386 LOC101927531A0A1B0GV80 90 aa1.29□□□□□ -2.2
LINC00888-204ENST00000487386 ATP5EP56381 51 aaPredicted RBP1.29□□□□□ -2.2
LINC00888-204ENST00000487386 TMEM258P61165 79 aa1.29□□□□□ -2.2
LINC00888-204ENST00000487386 RPL37P61927 97 aaKnown RBP1.29□□□□□ -2.2
LINC00888-204ENST00000487386 KLKP1Q107X0 134 aa1.29□□□□□ -2.2
LINC00888-204ENST00000487386 CYSTM1Q9H1C7 97 aa1.29□□□□□ -2.2
LINC00888-204ENST00000487386 LRP1Q07954 4544 aaKnown RBP1.29□□□□□ -2.2
LINC00888-204ENST00000487386 TNXBP22105 4242 aa1.28□□□□□ -2.2
LINC00888-204ENST00000487386 H3BPC8 53 aa1.28□□□□□ -2.2
LINC00888-204ENST00000487386 NDUFC1O43677 76 aa1.28□□□□□ -2.2
LINC00888-204ENST00000487386 SRRM2Q9UQ35 2752 aaKnown RBP1.28□□□□□ -2.2
LINC00888-204ENST00000487386 H7BZZ5 65 aa1.27□□□□□ -2.21
LINC00888-204ENST00000487386 ATP11AUNQ6ZP68 121 aa1.27□□□□□ -2.21
LINC00888-204ENST00000487386 PRO0628Q9UI54 55 aa1.27□□□□□ -2.21
LINC00888-204ENST00000487386 HMCN2Q8NDA2 5059 aa1.26□□□□□ -2.21
LINC00888-204ENST00000487386 HERC1Q15751 4861 aa1.26□□□□□ -2.21
LINC00888-204ENST00000487386 CHKB-CPT1BH3BT56 60 aa1.26□□□□□ -2.21
LINC00888-204ENST00000487386 DMBT1Q9UGM3 2413 aaPredicted RBP1.25□□□□□ -2.21
LINC00888-204ENST00000487386 K7ERS5 55 aa1.24□□□□□ -2.21
LINC00888-204ENST00000487386 SPINK7P58062 85 aa1.24□□□□□ -2.21
LINC00888-204ENST00000487386 C4orf26Q17RF5 130 aa1.24□□□□□ -2.21
LINC00888-204ENST00000487386 COA5Q86WW8 74 aa1.24□□□□□ -2.21
LINC00888-204ENST00000487386 DMAC1Q96GE9 116 aa1.24□□□□□ -2.21
LINC00888-204ENST00000487386 CYP4F30PQ9H0H9 118 aa1.24□□□□□ -2.21
LINC00888-204ENST00000487386 SERP1Q9Y6X1 66 aa1.24□□□□□ -2.21
LINC00888-204ENST00000487386 COX6B2Q6YFQ2 88 aa1.23□□□□□ -2.21
LINC00888-204ENST00000487386 RBM12B-AS1Q9P1G2 102 aa1.23□□□□□ -2.21
LINC00888-204ENST00000487386 A8MUN3 132 aa1.22□□□□□ -2.21
LINC00888-204ENST00000487386 S4R3F8 94 aa1.22□□□□□ -2.21
LINC00888-204ENST00000487386 ACYP2P14621 99 aa1.21□□□□□ -2.22
LINC00888-204ENST00000487386 LPAP08519 4548 aa1.21□□□□□ -2.22
LINC00888-204ENST00000487386 LRP2P98164 4655 aa1.2□□□□□ -2.22
LINC00888-204ENST00000487386 SPTSSBQ8NFR3 76 aa1.2□□□□□ -2.22
LINC00888-204ENST00000487386 PRR15LQ9BU68 103 aa1.2□□□□□ -2.22
LINC00888-204ENST00000487386 MUC17Q685J3 4493 aa1.19□□□□□ -2.22
LINC00888-204ENST00000487386 UBR4Q5T4S7 5183 aa1.19□□□□□ -2.22
LINC00888-204ENST00000487386 LCA10Q71F78 164 aa1.19□□□□□ -2.22
LINC00888-204ENST00000487386 RNF213Q63HN8 5207 aa1.18□□□□□ -2.22
LINC00888-204ENST00000487386 A0A1B0GU69 56 aa1.18□□□□□ -2.22
LINC00888-204ENST00000487386 H1FX-AS1Q4G0G2 97 aa1.18□□□□□ -2.22
LINC00888-204ENST00000487386 V9GYY9 64 aa1.18□□□□□ -2.22
LINC00888-204ENST00000487386 M0R2T5 61 aa1.17□□□□□ -2.22
LINC00888-204ENST00000487386 A6NED7 52 aa1.15□□□□□ -2.23
LINC00888-204ENST00000487386 RPS28P62857 69 aaKnown RBP1.15□□□□□ -2.23
LINC00888-204ENST00000487386 BRK1Q8WUW1 75 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms