RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 CSAG1Q6PB30 78 aa6.12□□□□□ -1.43
SF1-216ENST00000486867 A8MUN3 132 aa6.1□□□□□ -1.43
SF1-216ENST00000486867 SMIM20Q8N5G0 67 aa6.04□□□□□ -1.44
SF1-216ENST00000486867 SSPOA2VEC9 5147 aa6.04□□□□□ -1.44
SF1-216ENST00000486867 TRAV7A0A075B6U4 112 aa6.03□□□□□ -1.44
SF1-216ENST00000486867 FAM236AA0A1B0GUQ0 79 aa6.03□□□□□ -1.44
SF1-216ENST00000486867 FAM236BA0A1B0GV22 79 aa6.03□□□□□ -1.44
SF1-216ENST00000486867 KRTAP19-1Q8IUB9 90 aa6.02□□□□□ -1.45
SF1-216ENST00000486867 H0YAA0 97 aa5.99□□□□□ -1.45
SF1-216ENST00000486867 NDUFC1O43677 76 aa5.99□□□□□ -1.45
SF1-216ENST00000486867 DMAC1Q96GE9 116 aa5.99□□□□□ -1.45
SF1-216ENST00000486867 SPRR2GQ9BYE4 73 aa5.98□□□□□ -1.45
SF1-216ENST00000486867 KRTAP19-6Q3LI70 58 aa5.97□□□□□ -1.45
SF1-216ENST00000486867 KRTAP19-8Q3LI54 63 aa5.92□□□□□ -1.46
SF1-216ENST00000486867 CRIPTQ9P021 101 aa5.92□□□□□ -1.46
SF1-216ENST00000486867 FCGBPQ9Y6R7 5405 aaPredicted RBP5.91□□□□□ -1.46
SF1-216ENST00000486867 MT1BP07438 61 aa5.88□□□□□ -1.47
SF1-216ENST00000486867 SERP2Q8N6R1 65 aa5.88□□□□□ -1.47
SF1-216ENST00000486867 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.85□□□□□ -1.47
SF1-216ENST00000486867 ACYP2P14621 99 aa5.83□□□□□ -1.48
SF1-216ENST00000486867 Q5VV11 94 aa5.83□□□□□ -1.48
SF1-216ENST00000486867 ANAPC13Q9BS18 74 aa5.83□□□□□ -1.48
SF1-216ENST00000486867 SNURFQ9Y675 71 aa5.83□□□□□ -1.48
SF1-216ENST00000486867 ADM2Q7Z4H4 148 aa5.82□□□□□ -1.48
SF1-216ENST00000486867 SPANXA2-OT1Q8N9U9 137 aa5.82□□□□□ -1.48
SF1-216ENST00000486867 C20orf197Q8N268 126 aa5.8□□□□□ -1.48
SF1-216ENST00000486867 KRTAP3-2Q9BYR7 98 aa5.77□□□□□ -1.49
SF1-216ENST00000486867 P0C880 135 aa5.75□□□□□ -1.49
SF1-216ENST00000486867 COX7CP15954 63 aa5.74□□□□□ -1.49
SF1-216ENST00000486867 KRTAP9-7A8MTY7 169 aa5.71□□□□□ -1.5
SF1-216ENST00000486867 KRTAP10-5P60370 271 aa5.71□□□□□ -1.5
SF1-216ENST00000486867 SPTSSBQ8NFR3 76 aa5.71□□□□□ -1.5
SF1-216ENST00000486867 A6NN06 94 aa5.67□□□□□ -1.5
SF1-216ENST00000486867 CHKB-CPT1BH3BT56 60 aa5.66□□□□□ -1.5
SF1-216ENST00000486867 R4GN34 69 aa5.66□□□□□ -1.5
SF1-216ENST00000486867 H7BZZ5 65 aa5.64□□□□□ -1.51
SF1-216ENST00000486867 MACF1Q9UPN3 7388 aaKnown RBP5.64□□□□□ -1.51
SF1-216ENST00000486867 CYSTM1Q9H1C7 97 aa5.63□□□□□ -1.51
SF1-216ENST00000486867 M0QZ58 72 aa5.62□□□□□ -1.51
SF1-216ENST00000486867 COA5Q86WW8 74 aa5.59□□□□□ -1.51
SF1-216ENST00000486867 SYNE2Q8WXH0 6885 aaKnown RBP5.56□□□□□ -1.52
SF1-216ENST00000486867 TMEM258P61165 79 aa5.55□□□□□ -1.52
SF1-216ENST00000486867 MT1XP80297 61 aa5.55□□□□□ -1.52
SF1-216ENST00000486867 KRTAP6-3Q3LI67 103 aa5.55□□□□□ -1.52
SF1-216ENST00000486867 PLAC4Q8WY50 150 aa5.54□□□□□ -1.52
SF1-216ENST00000486867 RPS28P62857 69 aaKnown RBP5.52□□□□□ -1.53
SF1-216ENST00000486867 CCDC179H3BU77 68 aa5.51□□□□□ -1.53
SF1-216ENST00000486867 PRO2289Q9P1D8 64 aa5.51□□□□□ -1.53
SF1-216ENST00000486867 ATP5EP56381 51 aaPredicted RBP5.49□□□□□ -1.53
SF1-216ENST00000486867 SVIPQ8NHG7 77 aa5.48□□□□□ -1.53
SF1-216ENST00000486867 LINC01554Q52M75 96 aa5.47□□□□□ -1.53
SF1-216ENST00000486867 KRTAP13-4Q3LI77 160 aa5.45□□□□□ -1.54
SF1-216ENST00000486867 KRTAP12-2P59991 146 aa5.42□□□□□ -1.54
SF1-216ENST00000486867 KRTAP5-9P26371 169 aa5.4□□□□□ -1.54
SF1-216ENST00000486867 SEC61GP60059 68 aa5.38□□□□□ -1.55
SF1-216ENST00000486867 SERP1Q9Y6X1 66 aa5.38□□□□□ -1.55
SF1-216ENST00000486867 A0A1B0GU33 70 aa5.31□□□□□ -1.56
SF1-216ENST00000486867 SMIM26A0A096LP01 95 aa5.29□□□□□ -1.56
SF1-216ENST00000486867 KRTAP10-12P60413 245 aa5.29□□□□□ -1.56
SF1-216ENST00000486867 A0A1B0GU69 56 aa5.27□□□□□ -1.57
SF1-216ENST00000486867 KRTAP10-7P60409 375 aaPredicted RBP5.26□□□□□ -1.57
SF1-216ENST00000486867 SPATA8Q6RVD6 105 aa5.26□□□□□ -1.57
SF1-216ENST00000486867 KMT2DO14686 5537 aa5.24□□□□□ -1.57
SF1-216ENST00000486867 KRTAP8-1Q8IUC2 63 aa5.22□□□□□ -1.57
SF1-216ENST00000486867 V9GYY9 64 aa5.22□□□□□ -1.57
SF1-216ENST00000486867 KRTAP4-8A0A0G2JLE6 195 aa5.21□□□□□ -1.58
SF1-216ENST00000486867 KRTAP12-1P59990 96 aa5.21□□□□□ -1.58
SF1-216ENST00000486867 KRTAP4-8Q9BYQ9 185 aa5.21□□□□□ -1.58
SF1-216ENST00000486867 LINC01558Q9Y6Z2 57 aa5.21□□□□□ -1.58
SF1-216ENST00000486867 NEBP20929 6669 aa5.21□□□□□ -1.58
SF1-216ENST00000486867 MUC12Q9UKN1 5478 aa5.2□□□□□ -1.58
SF1-216ENST00000486867 A0A0D9SG42 100 aa5.2□□□□□ -1.58
SF1-216ENST00000486867 CAMK2N1Q7Z7J9 78 aa5.2□□□□□ -1.58
SF1-216ENST00000486867 SPRR2FQ96RM1 72 aa5.18□□□□□ -1.58
SF1-216ENST00000486867 PRR15LQ9BU68 103 aa5.16□□□□□ -1.58
SF1-216ENST00000486867 PRO0628Q9UI54 55 aa5.13□□□□□ -1.59
SF1-216ENST00000486867 SPINT4Q6UDR6 99 aa5.12□□□□□ -1.59
SF1-216ENST00000486867 MDN1Q9NU22 5596 aa5.11□□□□□ -1.59
SF1-216ENST00000486867 A8MU10 97 aa5.1□□□□□ -1.59
SF1-216ENST00000486867 LCE1AQ5T7P2 110 aa5.08□□□□□ -1.6
SF1-216ENST00000486867 SPRR2EP22531 72 aa5.06□□□□□ -1.6
SF1-216ENST00000486867 SPRR2BP35325 72 aa5.06□□□□□ -1.6
SF1-216ENST00000486867 SPRR2AP35326 72 aa5.06□□□□□ -1.6
SF1-216ENST00000486867 Q1T7F1 81 aa5.05□□□□□ -1.6
SF1-216ENST00000486867 UQCR11O14957 56 aa5.02□□□□□ -1.61
SF1-216ENST00000486867 KRTAP20-1Q3LI63 56 aa5.01□□□□□ -1.61
SF1-216ENST00000486867 BRK1Q8WUW1 75 aa4.99□□□□□ -1.61
SF1-216ENST00000486867 KRTAP19-7Q3SYF9 63 aa4.97□□□□□ -1.61
SF1-216ENST00000486867 KRTAP2-3P0C7H8 128 aa4.95□□□□□ -1.62
SF1-216ENST00000486867 KRTAP2-4Q9BYR9 128 aa4.95□□□□□ -1.62
SF1-216ENST00000486867 C10orf95Q9H7T3 257 aa4.95□□□□□ -1.62
SF1-216ENST00000486867 MT1EP04732 61 aa4.9□□□□□ -1.63
SF1-216ENST00000486867 MIR22HGQ0VDD5 57 aa4.9□□□□□ -1.63
SF1-216ENST00000486867 SPRR2DP22532 72 aa4.89□□□□□ -1.63
SF1-216ENST00000486867 TNP1P09430 55 aa4.88□□□□□ -1.63
SF1-216ENST00000486867 PSPHP1O15172 72 aa4.87□□□□□ -1.63
SF1-216ENST00000486867 KRTAP19-5Q3LI72 72 aa4.84□□□□□ -1.63
SF1-216ENST00000486867 LCE5AQ5TCM9 118 aa4.84□□□□□ -1.63
SF1-216ENST00000486867 A6NED7 52 aa4.83□□□□□ -1.64
SF1-216ENST00000486867 KRTAP19-3Q7Z4W3 81 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms