RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 SPATA8Q6RVD6 105 aa9.57□□□□□ -0.88
PDLIM7-207ENST00000486828 KRTAP3-1Q9BYR8 98 aa9.57□□□□□ -0.88
PDLIM7-207ENST00000486828 UQCR11O14957 56 aa9.56□□□□□ -0.88
PDLIM7-207ENST00000486828 TNXBP22105 4242 aa9.53□□□□□ -0.88
PDLIM7-207ENST00000486828 FAT3Q8TDW7 4589 aa9.53□□□□□ -0.88
PDLIM7-207ENST00000486828 MIR22HGQ0VDD5 57 aa9.52□□□□□ -0.88
PDLIM7-207ENST00000486828 A0A0A0MQY5 61 aa9.5□□□□□ -0.89
PDLIM7-207ENST00000486828 COX6B2Q6YFQ2 88 aa9.46□□□□□ -0.89
PDLIM7-207ENST00000486828 PRAC1Q96KF2 57 aa9.44□□□□□ -0.9
PDLIM7-207ENST00000486828 RPL37P61927 97 aaKnown RBP9.42□□□□□ -0.9
PDLIM7-207ENST00000486828 DMBT1Q9UGM3 2413 aaPredicted RBP9.41□□□□□ -0.9
PDLIM7-207ENST00000486828 MT1HL1P0DM35 61 aa9.4□□□□□ -0.9
PDLIM7-207ENST00000486828 XP32Q5T750 250 aa9.38□□□□□ -0.91
PDLIM7-207ENST00000486828 J3QL48 77 aa9.29□□□□□ -0.92
PDLIM7-207ENST00000486828 ADM2Q7Z4H4 148 aa9.29□□□□□ -0.92
PDLIM7-207ENST00000486828 HERC1Q15751 4861 aa9.28□□□□□ -0.92
PDLIM7-207ENST00000486828 A0A1B0GU33 70 aa9.27□□□□□ -0.93
PDLIM7-207ENST00000486828 H0YAA0 97 aa9.27□□□□□ -0.93
PDLIM7-207ENST00000486828 H1FX-AS1Q4G0G2 97 aa9.25□□□□□ -0.93
PDLIM7-207ENST00000486828 KRTAP3-3Q9BYR6 98 aa9.19□□□□□ -0.94
PDLIM7-207ENST00000486828 ROMO1P60602 79 aa9.13□□□□□ -0.95
PDLIM7-207ENST00000486828 S4R3F8 94 aa9.13□□□□□ -0.95
PDLIM7-207ENST00000486828 TPRXLQ17RH7 258 aa9.11□□□□□ -0.95
PDLIM7-207ENST00000486828 CSAG1Q6PB30 78 aa9.11□□□□□ -0.95
PDLIM7-207ENST00000486828 KRTAP10-6P60371 365 aaPredicted RBP9.06□□□□□ -0.96
PDLIM7-207ENST00000486828 KRTAP3-2Q9BYR7 98 aa9.01□□□□□ -0.97
PDLIM7-207ENST00000486828 HMCN2Q8NDA2 5059 aa9□□□□□ -0.97
PDLIM7-207ENST00000486828 K7ERS5 55 aa8.94□□□□□ -0.98
PDLIM7-207ENST00000486828 KRTAP13-4Q3LI77 160 aa8.92□□□□□ -0.98
PDLIM7-207ENST00000486828 LRP2P98164 4655 aa8.92□□□□□ -0.98
PDLIM7-207ENST00000486828 LPAP08519 4548 aa8.91□□□□□ -0.98
PDLIM7-207ENST00000486828 P0C880 135 aa8.88□□□□□ -0.99
PDLIM7-207ENST00000486828 KRTAP25-1Q3LHN0 102 aa8.88□□□□□ -0.99
PDLIM7-207ENST00000486828 A0A0D9SG42 100 aa8.81□□□□□ -1
PDLIM7-207ENST00000486828 SEC61BP60468 96 aaKnown RBP8.77□□□□□ -1.01
PDLIM7-207ENST00000486828 UBR4Q5T4S7 5183 aa8.75□□□□□ -1.01
PDLIM7-207ENST00000486828 M0QZ58 72 aa8.65□□□□□ -1.02
PDLIM7-207ENST00000486828 KRTAP12-2P59991 146 aa8.62□□□□□ -1.03
PDLIM7-207ENST00000486828 KRTAP4-1Q9BYQ7 146 aa8.62□□□□□ -1.03
PDLIM7-207ENST00000486828 MUC17Q685J3 4493 aa8.61□□□□□ -1.03
PDLIM7-207ENST00000486828 KRTAP12-1P59990 96 aa8.59□□□□□ -1.03
PDLIM7-207ENST00000486828 CRIPTQ9P021 101 aa8.58□□□□□ -1.04
PDLIM7-207ENST00000486828 RNF213Q63HN8 5207 aa8.55□□□□□ -1.04
PDLIM7-207ENST00000486828 SPINT4Q6UDR6 99 aa8.54□□□□□ -1.04
PDLIM7-207ENST00000486828 MUC2Q02817 5179 aa8.51□□□□□ -1.05
PDLIM7-207ENST00000486828 KRTAP19-2Q3LHN2 52 aa8.48□□□□□ -1.05
PDLIM7-207ENST00000486828 LUZP6Q538Z0 58 aa8.46□□□□□ -1.06
PDLIM7-207ENST00000486828 R4GN34 69 aa8.45□□□□□ -1.06
PDLIM7-207ENST00000486828 NDUFAF8A1L188 74 aa8.43□□□□□ -1.06
PDLIM7-207ENST00000486828 KRTAP15-1Q3LI76 137 aa8.39□□□□□ -1.07
PDLIM7-207ENST00000486828 LORP23490 312 aaPredicted RBP8.36□□□□□ -1.07
PDLIM7-207ENST00000486828 C10orf95Q9H7T3 257 aa8.33□□□□□ -1.08
PDLIM7-207ENST00000486828 FAT4Q6V0I7 4981 aa8.18□□□□□ -1.1
PDLIM7-207ENST00000486828 FLGP20930 4061 aaPredicted RBP8.14□□□□□ -1.11
PDLIM7-207ENST00000486828 LCE2CQ5TA81 110 aa8.08□□□□□ -1.12
PDLIM7-207ENST00000486828 CAMK2N1Q7Z7J9 78 aa7.99□□□□□ -1.13
PDLIM7-207ENST00000486828 LCE2AQ5TA79 106 aaPredicted RBP7.95□□□□□ -1.14
PDLIM7-207ENST00000486828 MT1HP80294 61 aa7.93□□□□□ -1.14
PDLIM7-207ENST00000486828 M0R2T5 61 aa7.84□□□□□ -1.16
PDLIM7-207ENST00000486828 PP632Q6XCG6 107 aa7.8□□□□□ -1.16
PDLIM7-207ENST00000486828 SPRR2GQ9BYE4 73 aa7.8□□□□□ -1.16
PDLIM7-207ENST00000486828 KRTAP19-1Q8IUB9 90 aa7.74□□□□□ -1.17
PDLIM7-207ENST00000486828 TNP1P09430 55 aa7.7□□□□□ -1.18
PDLIM7-207ENST00000486828 PLAC4Q8WY50 150 aa7.68□□□□□ -1.18
PDLIM7-207ENST00000486828 MT2AP02795 61 aa7.66□□□□□ -1.18
PDLIM7-207ENST00000486828 MT1FP04733 61 aa7.64□□□□□ -1.19
PDLIM7-207ENST00000486828 KRTAP23-1A1A580 65 aa7.62□□□□□ -1.19
PDLIM7-207ENST00000486828 KRTAP10-10P60014 251 aa7.62□□□□□ -1.19
PDLIM7-207ENST00000486828 KRTAP9-8Q9BYQ0 159 aa7.62□□□□□ -1.19
PDLIM7-207ENST00000486828 KRTAP19-8Q3LI54 63 aa7.48□□□□□ -1.21
PDLIM7-207ENST00000486828 PRO2289Q9P1D8 64 aa7.45□□□□□ -1.22
PDLIM7-207ENST00000486828 KRTAP9-2Q9BYQ4 174 aa7.41□□□□□ -1.22
PDLIM7-207ENST00000486828 LCE2DQ5TA82 110 aaPredicted RBP7.39□□□□□ -1.23
PDLIM7-207ENST00000486828 MT1BP07438 61 aa7.37□□□□□ -1.23
PDLIM7-207ENST00000486828 KRTAP9-3Q9BYQ3 159 aa7.34□□□□□ -1.23
PDLIM7-207ENST00000486828 FSIP2Q5CZC0 6907 aa7.31□□□□□ -1.24
PDLIM7-207ENST00000486828 LCE3AQ5TA76 89 aa7.3□□□□□ -1.24
PDLIM7-207ENST00000486828 KRTAP10-5P60370 271 aa7.28□□□□□ -1.24
PDLIM7-207ENST00000486828 MT1XP80297 61 aa7.27□□□□□ -1.25
PDLIM7-207ENST00000486828 SPRR5A0A1B0GTR4 108 aa7.21□□□□□ -1.26
PDLIM7-207ENST00000486828 LCE2BO14633 110 aa7.19□□□□□ -1.26
PDLIM7-207ENST00000486828 USH2AO75445 5202 aa7.18□□□□□ -1.26
PDLIM7-207ENST00000486828 KRTAP8-1Q8IUC2 63 aa7.15□□□□□ -1.27
PDLIM7-207ENST00000486828 INE1O15225 51 aa7.11□□□□□ -1.27
PDLIM7-207ENST00000486828 KRTAP10-12P60413 245 aa7.09□□□□□ -1.27
PDLIM7-207ENST00000486828 CRCT1Q9UGL9 99 aa7.05□□□□□ -1.28
PDLIM7-207ENST00000486828 SSPOA2VEC9 5147 aa7.05□□□□□ -1.28
PDLIM7-207ENST00000486828 KRTAP10-7P60409 375 aaPredicted RBP7.04□□□□□ -1.28
PDLIM7-207ENST00000486828 KRTAP9-6A0A140TA67 174 aa7.01□□□□□ -1.29
PDLIM7-207ENST00000486828 KRTAP12-3P60328 96 aa6.96□□□□□ -1.3
PDLIM7-207ENST00000486828 FCGBPQ9Y6R7 5405 aaPredicted RBP6.83□□□□□ -1.32
PDLIM7-207ENST00000486828 KRTAP19-6Q3LI70 58 aa6.82□□□□□ -1.32
PDLIM7-207ENST00000486828 KRTAP19-5Q3LI72 72 aa6.72□□□□□ -1.33
PDLIM7-207ENST00000486828 KRTAP4-8A0A0G2JLE6 195 aa6.61□□□□□ -1.35
PDLIM7-207ENST00000486828 KRTAP4-8Q9BYQ9 185 aa6.61□□□□□ -1.35
PDLIM7-207ENST00000486828 MACF1Q9UPN3 7388 aaKnown RBP6.58□□□□□ -1.36
PDLIM7-207ENST00000486828 LCE3CQ5T5A8 94 aa6.56□□□□□ -1.36
PDLIM7-207ENST00000486828 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.55□□□□□ -1.36
PDLIM7-207ENST00000486828 KMT2DO14686 5537 aa6.54□□□□□ -1.36
PDLIM7-207ENST00000486828 SYNE2Q8WXH0 6885 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms