RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 LINC00208Q96KT6 92 aa5.13□□□□□ -1.59
TMEM39A-208ENST00000486159 C1orf64Q8NEQ6 169 aa5.12□□□□□ -1.59
TMEM39A-208ENST00000486159 SYNE2Q8WXH0 6885 aaKnown RBP5.12□□□□□ -1.59
TMEM39A-208ENST00000486159 KRTAP19-2Q3LHN2 52 aa5.11□□□□□ -1.59
TMEM39A-208ENST00000486159 LOC101927531A0A1B0GV80 90 aa5.1□□□□□ -1.59
TMEM39A-208ENST00000486159 KRTAP16-1A8MUX0 517 aa5.1□□□□□ -1.59
TMEM39A-208ENST00000486159 SEC61BP60468 96 aaKnown RBP5.1□□□□□ -1.59
TMEM39A-208ENST00000486159 SPANXA2-OT1Q8N9U9 137 aa5.1□□□□□ -1.59
TMEM39A-208ENST00000486159 SERP1Q9Y6X1 66 aa5.09□□□□□ -1.59
TMEM39A-208ENST00000486159 C9orf92A6NGG3 77 aa5.08□□□□□ -1.6
TMEM39A-208ENST00000486159 PCOTHQ58A44 107 aa5.07□□□□□ -1.6
TMEM39A-208ENST00000486159 CYP4F30PQ9H0H9 118 aa5.06□□□□□ -1.6
TMEM39A-208ENST00000486159 MT1HP80294 61 aa5.05□□□□□ -1.6
TMEM39A-208ENST00000486159 SSPOA2VEC9 5147 aa5.03□□□□□ -1.6
TMEM39A-208ENST00000486159 Q5W150 140 aa5.03□□□□□ -1.6
TMEM39A-208ENST00000486159 KRTAP4-11Q9BYQ6 195 aa5.03□□□□□ -1.6
TMEM39A-208ENST00000486159 C20orf166-AS1Q96NR2 134 aa5.01□□□□□ -1.61
TMEM39A-208ENST00000486159 A8MUU9 505 aa5□□□□□ -1.61
TMEM39A-208ENST00000486159 IGKV2-30P06310 120 aa5□□□□□ -1.61
TMEM39A-208ENST00000486159 SMIM26A0A096LP01 95 aa4.98□□□□□ -1.61
TMEM39A-208ENST00000486159 KRTAP4-2Q9BYR5 136 aa4.98□□□□□ -1.61
TMEM39A-208ENST00000486159 Q75L30 129 aa4.97□□□□□ -1.61
TMEM39A-208ENST00000486159 MACF1Q9UPN3 7388 aaKnown RBP4.96□□□□□ -1.61
TMEM39A-208ENST00000486159 NEBP20929 6669 aa4.96□□□□□ -1.62
TMEM39A-208ENST00000486159 KRTAP10-6P60371 365 aaPredicted RBP4.96□□□□□ -1.62
TMEM39A-208ENST00000486159 FLGP20930 4061 aaPredicted RBP4.95□□□□□ -1.62
TMEM39A-208ENST00000486159 C7orf65Q6ZTY9 151 aa4.94□□□□□ -1.62
TMEM39A-208ENST00000486159 RPL37P61927 97 aaKnown RBP4.92□□□□□ -1.62
TMEM39A-208ENST00000486159 HRES1P13985 223 aa4.91□□□□□ -1.62
TMEM39A-208ENST00000486159 ACYP2P14621 99 aa4.91□□□□□ -1.62
TMEM39A-208ENST00000486159 KRTAP15-1Q3LI76 137 aa4.91□□□□□ -1.62
TMEM39A-208ENST00000486159 IGKV2D-30A0A075B6S6 120 aa4.9□□□□□ -1.63
TMEM39A-208ENST00000486159 DMAC1Q96GE9 116 aa4.9□□□□□ -1.63
TMEM39A-208ENST00000486159 V9GYY9 64 aa4.89□□□□□ -1.63
TMEM39A-208ENST00000486159 A8MUN3 132 aa4.88□□□□□ -1.63
TMEM39A-208ENST00000486159 M0R2T5 61 aa4.88□□□□□ -1.63
TMEM39A-208ENST00000486159 ATP11AUNQ6ZP68 121 aa4.88□□□□□ -1.63
TMEM39A-208ENST00000486159 COA5Q86WW8 74 aa4.88□□□□□ -1.63
TMEM39A-208ENST00000486159 FCGBPQ9Y6R7 5405 aaPredicted RBP4.86□□□□□ -1.63
TMEM39A-208ENST00000486159 COX6B2Q6YFQ2 88 aa4.86□□□□□ -1.63
TMEM39A-208ENST00000486159 Q1T7F1 81 aa4.85□□□□□ -1.63
TMEM39A-208ENST00000486159 USH2AO75445 5202 aa4.84□□□□□ -1.64
TMEM39A-208ENST00000486159 SPINK7P58062 85 aa4.83□□□□□ -1.64
TMEM39A-208ENST00000486159 KRTAP20-1Q3LI63 56 aa4.82□□□□□ -1.64
TMEM39A-208ENST00000486159 CHKB-CPT1BH3BT56 60 aa4.81□□□□□ -1.64
TMEM39A-208ENST00000486159 SVIPQ8NHG7 77 aa4.8□□□□□ -1.64
TMEM39A-208ENST00000486159 MPLKIPQ8TAP9 179 aa4.78□□□□□ -1.64
TMEM39A-208ENST00000486159 SPTSSBQ8NFR3 76 aa4.77□□□□□ -1.65
TMEM39A-208ENST00000486159 KRTAP9-8Q9BYQ0 159 aa4.77□□□□□ -1.65
TMEM39A-208ENST00000486159 C4orf26Q17RF5 130 aa4.76□□□□□ -1.65
TMEM39A-208ENST00000486159 LINC01558Q9Y6Z2 57 aa4.76□□□□□ -1.65
TMEM39A-208ENST00000486159 GPR98Q8WXG9 6306 aa4.72□□□□□ -1.65
TMEM39A-208ENST00000486159 PRR15LQ9BU68 103 aa4.7□□□□□ -1.66
TMEM39A-208ENST00000486159 PSPHP1O15172 72 aa4.68□□□□□ -1.66
TMEM39A-208ENST00000486159 MT2AP02795 61 aa4.68□□□□□ -1.66
TMEM39A-208ENST00000486159 KRTAP6-3Q3LI67 103 aa4.68□□□□□ -1.66
TMEM39A-208ENST00000486159 MT1FP04733 61 aa4.66□□□□□ -1.66
TMEM39A-208ENST00000486159 Q5VV11 94 aa4.66□□□□□ -1.66
TMEM39A-208ENST00000486159 RBM12B-AS1Q9P1G2 102 aa4.65□□□□□ -1.67
TMEM39A-208ENST00000486159 A0A1B0GU69 56 aa4.64□□□□□ -1.67
TMEM39A-208ENST00000486159 SEC61GP60059 68 aa4.63□□□□□ -1.67
TMEM39A-208ENST00000486159 H1FX-AS1Q4G0G2 97 aa4.62□□□□□ -1.67
TMEM39A-208ENST00000486159 PRO0628Q9UI54 55 aa4.59□□□□□ -1.67
TMEM39A-208ENST00000486159 S4R3F8 94 aa4.59□□□□□ -1.67
TMEM39A-208ENST00000486159 A6NED7 52 aa4.58□□□□□ -1.68
TMEM39A-208ENST00000486159 KRTAP10-10P60014 251 aa4.58□□□□□ -1.68
TMEM39A-208ENST00000486159 BRK1Q8WUW1 75 aa4.58□□□□□ -1.68
TMEM39A-208ENST00000486159 MUC12Q9UKN1 5478 aa4.56□□□□□ -1.68
TMEM39A-208ENST00000486159 UQCR11O14957 56 aa4.54□□□□□ -1.68
TMEM39A-208ENST00000486159 LCA10Q71F78 164 aa4.54□□□□□ -1.68
TMEM39A-208ENST00000486159 CDC42SE1Q9NRR8 79 aa4.54□□□□□ -1.68
TMEM39A-208ENST00000486159 CSAG1Q6PB30 78 aa4.51□□□□□ -1.69
TMEM39A-208ENST00000486159 KMT2DO14686 5537 aa4.5□□□□□ -1.69
TMEM39A-208ENST00000486159 SPATA8Q6RVD6 105 aa4.49□□□□□ -1.69
TMEM39A-208ENST00000486159 A0A1B0GU33 70 aa4.47□□□□□ -1.69
TMEM39A-208ENST00000486159 MIR22HGQ0VDD5 57 aa4.47□□□□□ -1.69
TMEM39A-208ENST00000486159 H0YAA0 97 aa4.45□□□□□ -1.7
TMEM39A-208ENST00000486159 KRTAP19-6Q3LI70 58 aa4.45□□□□□ -1.7
TMEM39A-208ENST00000486159 KRTAP2-3P0C7H8 128 aa4.41□□□□□ -1.7
TMEM39A-208ENST00000486159 KRTAP2-4Q9BYR9 128 aa4.41□□□□□ -1.7
TMEM39A-208ENST00000486159 A8MU10 97 aa4.37□□□□□ -1.71
TMEM39A-208ENST00000486159 ADM2Q7Z4H4 148 aa4.37□□□□□ -1.71
TMEM39A-208ENST00000486159 PMAIP1Q13794 54 aa4.36□□□□□ -1.71
TMEM39A-208ENST00000486159 M0QZ58 72 aa4.35□□□□□ -1.71
TMEM39A-208ENST00000486159 P0C880 135 aa4.33□□□□□ -1.72
TMEM39A-208ENST00000486159 K7ERS5 55 aa4.32□□□□□ -1.72
TMEM39A-208ENST00000486159 A6NN06 94 aa4.31□□□□□ -1.72
TMEM39A-208ENST00000486159 A0A0A0MQY5 61 aa4.3□□□□□ -1.72
TMEM39A-208ENST00000486159 KRTAP13-4Q3LI77 160 aa4.26□□□□□ -1.73
TMEM39A-208ENST00000486159 MDN1Q9NU22 5596 aa4.26□□□□□ -1.73
TMEM39A-208ENST00000486159 CRIPTQ9P021 101 aa4.25□□□□□ -1.73
TMEM39A-208ENST00000486159 MT1BP07438 61 aa4.24□□□□□ -1.73
TMEM39A-208ENST00000486159 R4GN34 69 aa4.24□□□□□ -1.73
TMEM39A-208ENST00000486159 KTN1-AS1Q86SY8 53 aa4.22□□□□□ -1.73
TMEM39A-208ENST00000486159 LCE1AQ5T7P2 110 aa4.21□□□□□ -1.74
TMEM39A-208ENST00000486159 KRTAP2-2Q9BYT5 123 aa4.21□□□□□ -1.74
TMEM39A-208ENST00000486159 KRTAP2-1Q9BYU5 128 aa4.21□□□□□ -1.74
TMEM39A-208ENST00000486159 A0A0D9SG42 100 aa4.19□□□□□ -1.74
TMEM39A-208ENST00000486159 KRTAP5-3Q6L8H2 238 aa4.19□□□□□ -1.74
TMEM39A-208ENST00000486159 KRTAP19-8Q3LI54 63 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms