RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 A8MUN3 132 aa4.06□□□□□ -1.76
SF3A1-208ENST00000485618 LCE2BO14633 110 aa4.06□□□□□ -1.76
SF3A1-208ENST00000485618 S4R3F8 94 aa4.04□□□□□ -1.76
SF3A1-208ENST00000485618 CSAG1Q6PB30 78 aa4.03□□□□□ -1.76
SF3A1-208ENST00000485618 SERP2Q8N6R1 65 aa4.02□□□□□ -1.77
SF3A1-208ENST00000485618 KLKP1Q107X0 134 aa4□□□□□ -1.77
SF3A1-208ENST00000485618 NDUFC1O43677 76 aa3.99□□□□□ -1.77
SF3A1-208ENST00000485618 KRTAP3-1Q9BYR8 98 aa3.99□□□□□ -1.77
SF3A1-208ENST00000485618 ACYP2P14621 99 aa3.96□□□□□ -1.78
SF3A1-208ENST00000485618 KRTAP10-10P60014 251 aa3.96□□□□□ -1.78
SF3A1-208ENST00000485618 LCA10Q71F78 164 aa3.96□□□□□ -1.78
SF3A1-208ENST00000485618 C20orf197Q8N268 126 aa3.96□□□□□ -1.78
SF3A1-208ENST00000485618 KRTAP9-8Q9BYQ0 159 aa3.95□□□□□ -1.78
SF3A1-208ENST00000485618 SPTSSBQ8NFR3 76 aa3.94□□□□□ -1.78
SF3A1-208ENST00000485618 DMAC1Q96GE9 116 aa3.94□□□□□ -1.78
SF3A1-208ENST00000485618 SNURFQ9Y675 71 aa3.94□□□□□ -1.78
SF3A1-208ENST00000485618 COX7CP15954 63 aa3.93□□□□□ -1.78
SF3A1-208ENST00000485618 ANAPC13Q9BS18 74 aa3.93□□□□□ -1.78
SF3A1-208ENST00000485618 NEBP20929 6669 aa3.92□□□□□ -1.78
SF3A1-208ENST00000485618 MT2AP02795 61 aa3.92□□□□□ -1.78
SF3A1-208ENST00000485618 SPANXA2-OT1Q8N9U9 137 aa3.92□□□□□ -1.78
SF3A1-208ENST00000485618 CHKB-CPT1BH3BT56 60 aa3.9□□□□□ -1.79
SF3A1-208ENST00000485618 KRTAP19-1Q8IUB9 90 aa3.9□□□□□ -1.79
SF3A1-208ENST00000485618 MT1FP04733 61 aa3.87□□□□□ -1.79
SF3A1-208ENST00000485618 H0YAA0 97 aa3.86□□□□□ -1.79
SF3A1-208ENST00000485618 CRIPTQ9P021 101 aa3.85□□□□□ -1.79
SF3A1-208ENST00000485618 KRTAP9-3Q9BYQ3 159 aa3.83□□□□□ -1.8
SF3A1-208ENST00000485618 KRTAP20-1Q3LI63 56 aa3.82□□□□□ -1.8
SF3A1-208ENST00000485618 MUC12Q9UKN1 5478 aa3.82□□□□□ -1.8
SF3A1-208ENST00000485618 KRTAP6-3Q3LI67 103 aa3.81□□□□□ -1.8
SF3A1-208ENST00000485618 ADM2Q7Z4H4 148 aa3.81□□□□□ -1.8
SF3A1-208ENST00000485618 H7BZZ5 65 aa3.8□□□□□ -1.8
SF3A1-208ENST00000485618 ATP5EP56381 51 aaPredicted RBP3.78□□□□□ -1.8
SF3A1-208ENST00000485618 SEC61GP60059 68 aa3.77□□□□□ -1.81
SF3A1-208ENST00000485618 KRTAP19-6Q3LI70 58 aa3.76□□□□□ -1.81
SF3A1-208ENST00000485618 COA5Q86WW8 74 aa3.76□□□□□ -1.81
SF3A1-208ENST00000485618 CCDC179H3BU77 68 aa3.75□□□□□ -1.81
SF3A1-208ENST00000485618 R4GN34 69 aa3.75□□□□□ -1.81
SF3A1-208ENST00000485618 SPRR2GQ9BYE4 73 aa3.74□□□□□ -1.81
SF3A1-208ENST00000485618 SERP1Q9Y6X1 66 aa3.73□□□□□ -1.81
SF3A1-208ENST00000485618 Q5VV11 94 aa3.72□□□□□ -1.81
SF3A1-208ENST00000485618 TMEM258P61165 79 aa3.71□□□□□ -1.82
SF3A1-208ENST00000485618 CYSTM1Q9H1C7 97 aa3.71□□□□□ -1.82
SF3A1-208ENST00000485618 M0QZ58 72 aa3.69□□□□□ -1.82
SF3A1-208ENST00000485618 P0C880 135 aa3.69□□□□□ -1.82
SF3A1-208ENST00000485618 KRTAP19-8Q3LI54 63 aa3.67□□□□□ -1.82
SF3A1-208ENST00000485618 PLAC4Q8WY50 150 aa3.66□□□□□ -1.82
SF3A1-208ENST00000485618 MDN1Q9NU22 5596 aa3.64□□□□□ -1.83
SF3A1-208ENST00000485618 PRR15LQ9BU68 103 aa3.64□□□□□ -1.83
SF3A1-208ENST00000485618 A0A1B0GU69 56 aa3.63□□□□□ -1.83
SF3A1-208ENST00000485618 KMT2DO14686 5537 aa3.62□□□□□ -1.83
SF3A1-208ENST00000485618 LINC01554Q52M75 96 aa3.62□□□□□ -1.83
SF3A1-208ENST00000485618 GPR98Q8WXG9 6306 aa3.61□□□□□ -1.83
SF3A1-208ENST00000485618 A0A1B0GU33 70 aa3.6□□□□□ -1.83
SF3A1-208ENST00000485618 A6NN06 94 aa3.6□□□□□ -1.83
SF3A1-208ENST00000485618 H3BS24 57 aa3.6□□□□□ -1.83
SF3A1-208ENST00000485618 PCP4P48539 62 aa3.6□□□□□ -1.83
SF3A1-208ENST00000485618 PRO2289Q9P1D8 64 aa3.6□□□□□ -1.83
SF3A1-208ENST00000485618 MT1BP07438 61 aa3.59□□□□□ -1.83
SF3A1-208ENST00000485618 V9GYY9 64 aa3.56□□□□□ -1.84
SF3A1-208ENST00000485618 KRTAP2-3P0C7H8 128 aa3.54□□□□□ -1.84
SF3A1-208ENST00000485618 KRTAP2-4Q9BYR9 128 aa3.54□□□□□ -1.84
SF3A1-208ENST00000485618 LINC01558Q9Y6Z2 57 aa3.54□□□□□ -1.84
SF3A1-208ENST00000485618 SMIM26A0A096LP01 95 aa3.53□□□□□ -1.84
SF3A1-208ENST00000485618 KRTAP10-5P60370 271 aa3.52□□□□□ -1.85
SF3A1-208ENST00000485618 CAMK2N1Q7Z7J9 78 aa3.5□□□□□ -1.85
SF3A1-208ENST00000485618 A0A0D9SG42 100 aa3.48□□□□□ -1.85
SF3A1-208ENST00000485618 UQCR11O14957 56 aa3.48□□□□□ -1.85
SF3A1-208ENST00000485618 RPS28P62857 69 aaKnown RBP3.48□□□□□ -1.85
SF3A1-208ENST00000485618 KRTAP13-4Q3LI77 160 aa3.48□□□□□ -1.85
SF3A1-208ENST00000485618 SPATA8Q6RVD6 105 aa3.48□□□□□ -1.85
SF3A1-208ENST00000485618 KRTAP5-9P26371 169 aa3.45□□□□□ -1.86
SF3A1-208ENST00000485618 Q1T7F1 81 aa3.45□□□□□ -1.86
SF3A1-208ENST00000485618 SPINT4Q6UDR6 99 aa3.45□□□□□ -1.86
SF3A1-208ENST00000485618 MT1XP80297 61 aa3.43□□□□□ -1.86
SF3A1-208ENST00000485618 K7ERS5 55 aa3.4□□□□□ -1.87
SF3A1-208ENST00000485618 PSPHP1O15172 72 aa3.4□□□□□ -1.87
SF3A1-208ENST00000485618 MIR22HGQ0VDD5 57 aa3.39□□□□□ -1.87
SF3A1-208ENST00000485618 KRTAP2-2Q9BYT5 123 aa3.39□□□□□ -1.87
SF3A1-208ENST00000485618 KRTAP2-1Q9BYU5 128 aa3.39□□□□□ -1.87
SF3A1-208ENST00000485618 KRTAP12-1P59990 96 aa3.38□□□□□ -1.87
SF3A1-208ENST00000485618 A8MU10 97 aa3.37□□□□□ -1.87
SF3A1-208ENST00000485618 KRTAP12-2P59991 146 aa3.37□□□□□ -1.87
SF3A1-208ENST00000485618 A6NED7 52 aa3.34□□□□□ -1.87
SF3A1-208ENST00000485618 SPRR2EP22531 72 aa3.34□□□□□ -1.87
SF3A1-208ENST00000485618 SPRR2BP35325 72 aa3.34□□□□□ -1.87
SF3A1-208ENST00000485618 SPRR2AP35326 72 aa3.34□□□□□ -1.87
SF3A1-208ENST00000485618 SPRR2FQ96RM1 72 aa3.33□□□□□ -1.88
SF3A1-208ENST00000485618 SVIPQ8NHG7 77 aa3.32□□□□□ -1.88
SF3A1-208ENST00000485618 KRTAP10-12P60413 245 aa3.29□□□□□ -1.88
SF3A1-208ENST00000485618 KRTAP8-1Q8IUC2 63 aa3.29□□□□□ -1.88
SF3A1-208ENST00000485618 TNP1P09430 55 aa3.26□□□□□ -1.89
SF3A1-208ENST00000485618 KRTAP10-7P60409 375 aaPredicted RBP3.26□□□□□ -1.89
SF3A1-208ENST00000485618 LCE1AQ5T7P2 110 aa3.25□□□□□ -1.89
SF3A1-208ENST00000485618 SPRR2DP22532 72 aa3.23□□□□□ -1.89
SF3A1-208ENST00000485618 DSTQ03001 7570 aaKnown RBP3.22□□□□□ -1.89
SF3A1-208ENST00000485618 CDC42SE1Q9NRR8 79 aa3.21□□□□□ -1.9
SF3A1-208ENST00000485618 C10orf95Q9H7T3 257 aa3.2□□□□□ -1.9
SF3A1-208ENST00000485618 KRTAP4-8A0A0G2JLE6 195 aa3.19□□□□□ -1.9
SF3A1-208ENST00000485618 KRTAP4-8Q9BYQ9 185 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 303.8 ms