RNA–Protein interactions for RNA: ENST00000484380.2

ABCD4-212, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 1,823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-212ENST00000484380 SPTSSBQ8NFR3 76 aa7.52□□□□□ -1.21
ABCD4-212ENST00000484380 KRTAP3-1Q9BYR8 98 aa7.52□□□□□ -1.21
ABCD4-212ENST00000484380 BIRC6Q9NR09 4857 aa7.5□□□□□ -1.21
ABCD4-212ENST00000484380 MT1HL1P0DM35 61 aa7.5□□□□□ -1.21
ABCD4-212ENST00000484380 RPL37P61927 97 aaKnown RBP7.5□□□□□ -1.21
ABCD4-212ENST00000484380 COX6B2Q6YFQ2 88 aa7.47□□□□□ -1.21
ABCD4-212ENST00000484380 PMAIP1Q13794 54 aa7.46□□□□□ -1.21
ABCD4-212ENST00000484380 XP32Q5T750 250 aa7.46□□□□□ -1.21
ABCD4-212ENST00000484380 SPATA8Q6RVD6 105 aa7.43□□□□□ -1.22
ABCD4-212ENST00000484380 UQCR11O14957 56 aa7.43□□□□□ -1.22
ABCD4-212ENST00000484380 A6NN06 94 aa7.41□□□□□ -1.22
ABCD4-212ENST00000484380 MYCBP2O75592 4640 aa7.4□□□□□ -1.22
ABCD4-212ENST00000484380 SEC61GP60059 68 aa7.4□□□□□ -1.23
ABCD4-212ENST00000484380 DMBT1Q9UGM3 2413 aaPredicted RBP7.39□□□□□ -1.23
ABCD4-212ENST00000484380 HERC2O95714 4834 aa7.39□□□□□ -1.23
ABCD4-212ENST00000484380 MIR22HGQ0VDD5 57 aa7.38□□□□□ -1.23
ABCD4-212ENST00000484380 ABCA13Q86UQ4 5058 aa7.35□□□□□ -1.23
ABCD4-212ENST00000484380 TPRXLQ17RH7 258 aa7.32□□□□□ -1.24
ABCD4-212ENST00000484380 KTN1-AS1Q86SY8 53 aa7.31□□□□□ -1.24
ABCD4-212ENST00000484380 H1FX-AS1Q4G0G2 97 aa7.23□□□□□ -1.25
ABCD4-212ENST00000484380 A0A1B0GU33 70 aa7.22□□□□□ -1.25
ABCD4-212ENST00000484380 H0YAA0 97 aa7.21□□□□□ -1.26
ABCD4-212ENST00000484380 S4R3F8 94 aa7.2□□□□□ -1.26
ABCD4-212ENST00000484380 PCLOQ9Y6V0 5065 aa7.17□□□□□ -1.26
ABCD4-212ENST00000484380 LRP2P98164 4655 aa7.15□□□□□ -1.26
ABCD4-212ENST00000484380 SEC61BP60468 96 aaKnown RBP7.13□□□□□ -1.27
ABCD4-212ENST00000484380 KRTAP10-6P60371 365 aaPredicted RBP7.11□□□□□ -1.27
ABCD4-212ENST00000484380 LPAP08519 4548 aa7.1□□□□□ -1.27
ABCD4-212ENST00000484380 RBM12B-AS1Q9P1G2 102 aa7.09□□□□□ -1.27
ABCD4-212ENST00000484380 CSAG1Q6PB30 78 aa6.97□□□□□ -1.29
ABCD4-212ENST00000484380 KRTAP13-4Q3LI77 160 aa6.97□□□□□ -1.29
ABCD4-212ENST00000484380 ADM2Q7Z4H4 148 aa6.97□□□□□ -1.29
ABCD4-212ENST00000484380 MUC17Q685J3 4493 aa6.96□□□□□ -1.29
ABCD4-212ENST00000484380 PRAC1Q96KF2 57 aa6.96□□□□□ -1.3
ABCD4-212ENST00000484380 K7ERS5 55 aa6.95□□□□□ -1.3
ABCD4-212ENST00000484380 P0C880 135 aa6.95□□□□□ -1.3
ABCD4-212ENST00000484380 HERC1Q15751 4861 aa6.94□□□□□ -1.3
ABCD4-212ENST00000484380 KRTAP4-1Q9BYQ7 146 aa6.86□□□□□ -1.31
ABCD4-212ENST00000484380 A0A0D9SG42 100 aa6.82□□□□□ -1.32
ABCD4-212ENST00000484380 M0QZ58 72 aa6.82□□□□□ -1.32
ABCD4-212ENST00000484380 HMCN2Q8NDA2 5059 aa6.81□□□□□ -1.32
ABCD4-212ENST00000484380 KRTAP19-2Q3LHN2 52 aa6.8□□□□□ -1.32
ABCD4-212ENST00000484380 KRTAP19-4Q3LI73 84 aa6.8□□□□□ -1.32
ABCD4-212ENST00000484380 ROMO1P60602 79 aa6.76□□□□□ -1.33
ABCD4-212ENST00000484380 KRTAP12-1P59990 96 aa6.72□□□□□ -1.33
ABCD4-212ENST00000484380 KRTAP12-2P59991 146 aa6.72□□□□□ -1.33
ABCD4-212ENST00000484380 KRTAP25-1Q3LHN0 102 aa6.72□□□□□ -1.33
ABCD4-212ENST00000484380 LINC01554Q52M75 96 aa6.71□□□□□ -1.33
ABCD4-212ENST00000484380 FLGP20930 4061 aaPredicted RBP6.64□□□□□ -1.35
ABCD4-212ENST00000484380 R4GN34 69 aa6.64□□□□□ -1.35
ABCD4-212ENST00000484380 SPINT4Q6UDR6 99 aa6.63□□□□□ -1.35
ABCD4-212ENST00000484380 UBR4Q5T4S7 5183 aa6.55□□□□□ -1.36
ABCD4-212ENST00000484380 CRIPTQ9P021 101 aa6.54□□□□□ -1.36
ABCD4-212ENST00000484380 MUC2Q02817 5179 aa6.53□□□□□ -1.36
ABCD4-212ENST00000484380 KRTAP15-1Q3LI76 137 aa6.48□□□□□ -1.37
ABCD4-212ENST00000484380 RNF213Q63HN8 5207 aa6.48□□□□□ -1.37
ABCD4-212ENST00000484380 C10orf95Q9H7T3 257 aa6.41□□□□□ -1.38
ABCD4-212ENST00000484380 KRTAP9-6A0A140TA67 174 aa6.28□□□□□ -1.4
ABCD4-212ENST00000484380 KRTAP9-7A8MTY7 169 aa6.28□□□□□ -1.4
ABCD4-212ENST00000484380 MT1HP80294 61 aa6.27□□□□□ -1.41
ABCD4-212ENST00000484380 CAMK2N1Q7Z7J9 78 aa6.25□□□□□ -1.41
ABCD4-212ENST00000484380 FAT4Q6V0I7 4981 aa6.25□□□□□ -1.41
ABCD4-212ENST00000484380 LCE4AQ5TA78 99 aa6.23□□□□□ -1.41
ABCD4-212ENST00000484380 SPRR2GQ9BYE4 73 aa6.23□□□□□ -1.41
ABCD4-212ENST00000484380 KRTAP19-1Q8IUB9 90 aa6.22□□□□□ -1.41
ABCD4-212ENST00000484380 M0R2T5 61 aa6.2□□□□□ -1.42
ABCD4-212ENST00000484380 KRTAP9-4Q9BYQ2 154 aa6.19□□□□□ -1.42
ABCD4-212ENST00000484380 MT2AP02795 61 aa6.13□□□□□ -1.43
ABCD4-212ENST00000484380 PP632Q6XCG6 107 aa6.13□□□□□ -1.43
ABCD4-212ENST00000484380 KRTAP9-9Q9BYP9 154 aa6.13□□□□□ -1.43
ABCD4-212ENST00000484380 KRTAP9-8Q9BYQ0 159 aa6.11□□□□□ -1.43
ABCD4-212ENST00000484380 MT1FP04733 61 aa6.11□□□□□ -1.43
ABCD4-212ENST00000484380 PLAC4Q8WY50 150 aa6.06□□□□□ -1.44
ABCD4-212ENST00000484380 KRTAP10-10P60014 251 aa6.06□□□□□ -1.44
ABCD4-212ENST00000484380 TNP1P09430 55 aa6.04□□□□□ -1.44
ABCD4-212ENST00000484380 KRTAP19-8Q3LI54 63 aa6.01□□□□□ -1.45
ABCD4-212ENST00000484380 KRTAP4-12Q9BQ66 201 aa6.01□□□□□ -1.45
ABCD4-212ENST00000484380 LOC100996750A0A140TA64 210 aa5.97□□□□□ -1.45
ABCD4-212ENST00000484380 KRTAP4-6Q9BYQ5 205 aa5.97□□□□□ -1.45
ABCD4-212ENST00000484380 KRTAP9-3Q9BYQ3 159 aa5.92□□□□□ -1.46
ABCD4-212ENST00000484380 LCE5AQ5TCM9 118 aa5.89□□□□□ -1.47
ABCD4-212ENST00000484380 MT1BP07438 61 aa5.88□□□□□ -1.47
ABCD4-212ENST00000484380 KRTAP4-8Q9BYQ9 185 aa5.86□□□□□ -1.47
ABCD4-212ENST00000484380 KRTAP10-5P60370 271 aa5.78□□□□□ -1.48
ABCD4-212ENST00000484380 MT1XP80297 61 aa5.78□□□□□ -1.48
ABCD4-212ENST00000484380 KRTAP9-2Q9BYQ4 174 aa5.78□□□□□ -1.48
ABCD4-212ENST00000484380 NDUFAF8A1L188 74 aa5.75□□□□□ -1.49
ABCD4-212ENST00000484380 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.74□□□□□ -1.49
ABCD4-212ENST00000484380 LCE3AQ5TA76 89 aa5.73□□□□□ -1.49
ABCD4-212ENST00000484380 KRTAP8-1Q8IUC2 63 aa5.66□□□□□ -1.5
ABCD4-212ENST00000484380 PRO2289Q9P1D8 64 aa5.64□□□□□ -1.51
ABCD4-212ENST00000484380 SPRR5A0A1B0GTR4 108 aa5.64□□□□□ -1.51
ABCD4-212ENST00000484380 LCE3BQ5TA77 95 aa5.63□□□□□ -1.51
ABCD4-212ENST00000484380 KRTAP10-12P60413 245 aa5.61□□□□□ -1.51
ABCD4-212ENST00000484380 LUZP6Q538Z0 58 aa5.57□□□□□ -1.52
ABCD4-212ENST00000484380 KRTAP10-7P60409 375 aaPredicted RBP5.56□□□□□ -1.52
ABCD4-212ENST00000484380 USH2AO75445 5202 aa5.49□□□□□ -1.53
ABCD4-212ENST00000484380 KRTAP12-3P60328 96 aa5.48□□□□□ -1.53
ABCD4-212ENST00000484380 FSIP2Q5CZC0 6907 aa5.41□□□□□ -1.54
ABCD4-212ENST00000484380 LCE1AQ5T7P2 110 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms