RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 HIST1H4AP62805 103 aaKnown RBP5.95□□□□□ -1.46
HDAC1-209ENST00000484305 ATP5EP2Q5VTU8 51 aa5.95□□□□□ -1.46
HDAC1-209ENST00000484305 CSAG1Q6PB30 78 aa5.93□□□□□ -1.46
HDAC1-209ENST00000484305 LOC101927531A0A1B0GV80 90 aa5.91□□□□□ -1.46
HDAC1-209ENST00000484305 FAM236AA0A1B0GUQ0 79 aa5.9□□□□□ -1.46
HDAC1-209ENST00000484305 FAM236BA0A1B0GV22 79 aa5.9□□□□□ -1.46
HDAC1-209ENST00000484305 A0A1B0GV90 55 aa5.9□□□□□ -1.46
HDAC1-209ENST00000484305 KRTAP4-9Q9BYQ8 210 aa5.89□□□□□ -1.47
HDAC1-209ENST00000484305 A0A087WVE0 104 aa5.88□□□□□ -1.47
HDAC1-209ENST00000484305 UQCRQO14949 82 aa5.88□□□□□ -1.47
HDAC1-209ENST00000484305 LINC00643Q86TS7 51 aa5.88□□□□□ -1.47
HDAC1-209ENST00000484305 H0Y9P7 68 aa5.86□□□□□ -1.47
HDAC1-209ENST00000484305 ATOX1O00244 68 aa5.84□□□□□ -1.47
HDAC1-209ENST00000484305 SPRR2GQ9BYE4 73 aa5.81□□□□□ -1.48
HDAC1-209ENST00000484305 MACF1Q9UPN3 7388 aaKnown RBP5.81□□□□□ -1.48
HDAC1-209ENST00000484305 KLKP1Q107X0 134 aa5.79□□□□□ -1.48
HDAC1-209ENST00000484305 MT1BP07438 61 aa5.78□□□□□ -1.48
HDAC1-209ENST00000484305 LINC00208Q96KT6 92 aa5.78□□□□□ -1.48
HDAC1-209ENST00000484305 OCR1Q9BZK8 76 aa5.77□□□□□ -1.49
HDAC1-209ENST00000484305 KRTAP19-8Q3LI54 63 aa5.76□□□□□ -1.49
HDAC1-209ENST00000484305 Q5VV11 94 aa5.76□□□□□ -1.49
HDAC1-209ENST00000484305 KRTAP4-2Q9BYR5 136 aa5.74□□□□□ -1.49
HDAC1-209ENST00000484305 SYNE2Q8WXH0 6885 aaKnown RBP5.73□□□□□ -1.49
HDAC1-209ENST00000484305 NDUFC1O43677 76 aa5.73□□□□□ -1.49
HDAC1-209ENST00000484305 A8MUN3 132 aa5.72□□□□□ -1.49
HDAC1-209ENST00000484305 J3QR89 54 aa5.72□□□□□ -1.49
HDAC1-209ENST00000484305 MP68P56378 58 aa5.72□□□□□ -1.49
HDAC1-209ENST00000484305 IMUPQ9GZP8 106 aa5.71□□□□□ -1.5
HDAC1-209ENST00000484305 A6NN06 94 aa5.69□□□□□ -1.5
HDAC1-209ENST00000484305 KRTAP4-11Q9BYQ6 195 aa5.69□□□□□ -1.5
HDAC1-209ENST00000484305 CRIPTQ9P021 101 aa5.69□□□□□ -1.5
HDAC1-209ENST00000484305 H0YAA0 97 aa5.68□□□□□ -1.5
HDAC1-209ENST00000484305 LCE5AQ5TCM9 118 aa5.68□□□□□ -1.5
HDAC1-209ENST00000484305 KRTAP6-3Q3LI67 103 aa5.65□□□□□ -1.5
HDAC1-209ENST00000484305 H3BPC8 53 aa5.64□□□□□ -1.51
HDAC1-209ENST00000484305 SCGB1A1P11684 91 aa5.64□□□□□ -1.51
HDAC1-209ENST00000484305 KRTAP10-5P60370 271 aa5.63□□□□□ -1.51
HDAC1-209ENST00000484305 ADM2Q7Z4H4 148 aa5.63□□□□□ -1.51
HDAC1-209ENST00000484305 DMAC1Q96GE9 116 aa5.58□□□□□ -1.52
HDAC1-209ENST00000484305 MT-ATP8P03928 68 aa5.57□□□□□ -1.52
HDAC1-209ENST00000484305 K7ERU9 68 aa5.52□□□□□ -1.53
HDAC1-209ENST00000484305 P0C880 135 aa5.52□□□□□ -1.53
HDAC1-209ENST00000484305 TRAV7A0A075B6U4 112 aa5.49□□□□□ -1.53
HDAC1-209ENST00000484305 R4GN34 69 aa5.48□□□□□ -1.53
HDAC1-209ENST00000484305 SMIM20Q8N5G0 67 aa5.47□□□□□ -1.53
HDAC1-209ENST00000484305 C20orf197Q8N268 126 aa5.46□□□□□ -1.54
HDAC1-209ENST00000484305 ACYP2P14621 99 aa5.45□□□□□ -1.54
HDAC1-209ENST00000484305 M0QZ58 72 aa5.44□□□□□ -1.54
HDAC1-209ENST00000484305 MT1XP80297 61 aa5.43□□□□□ -1.54
HDAC1-209ENST00000484305 PLAC4Q8WY50 150 aa5.43□□□□□ -1.54
HDAC1-209ENST00000484305 KRTAP5-9P26371 169 aa5.4□□□□□ -1.54
HDAC1-209ENST00000484305 PRO2289Q9P1D8 64 aa5.4□□□□□ -1.54
HDAC1-209ENST00000484305 SNURFQ9Y675 71 aa5.4□□□□□ -1.54
HDAC1-209ENST00000484305 MUC12Q9UKN1 5478 aa5.38□□□□□ -1.55
HDAC1-209ENST00000484305 LINC01554Q52M75 96 aa5.37□□□□□ -1.55
HDAC1-209ENST00000484305 SPTSSBQ8NFR3 76 aa5.36□□□□□ -1.55
HDAC1-209ENST00000484305 NEBP20929 6669 aa5.36□□□□□ -1.55
HDAC1-209ENST00000484305 CHKB-CPT1BH3BT56 60 aa5.33□□□□□ -1.56
HDAC1-209ENST00000484305 SERP2Q8N6R1 65 aa5.31□□□□□ -1.56
HDAC1-209ENST00000484305 KMT2DO14686 5537 aa5.31□□□□□ -1.56
HDAC1-209ENST00000484305 SPANXA2-OT1Q8N9U9 137 aa5.3□□□□□ -1.56
HDAC1-209ENST00000484305 KRTAP12-2P59991 146 aa5.27□□□□□ -1.57
HDAC1-209ENST00000484305 SPRR2FQ96RM1 72 aa5.25□□□□□ -1.57
HDAC1-209ENST00000484305 KRTAP8-1Q8IUC2 63 aa5.23□□□□□ -1.57
HDAC1-209ENST00000484305 MDN1Q9NU22 5596 aa5.22□□□□□ -1.57
HDAC1-209ENST00000484305 KRTAP20-1Q3LI63 56 aa5.21□□□□□ -1.58
HDAC1-209ENST00000484305 KRTAP10-7P60409 375 aaPredicted RBP5.19□□□□□ -1.58
HDAC1-209ENST00000484305 KRTAP13-4Q3LI77 160 aa5.18□□□□□ -1.58
HDAC1-209ENST00000484305 COA5Q86WW8 74 aa5.17□□□□□ -1.58
HDAC1-209ENST00000484305 SPRR2EP22531 72 aa5.16□□□□□ -1.58
HDAC1-209ENST00000484305 SPRR2BP35325 72 aa5.16□□□□□ -1.58
HDAC1-209ENST00000484305 SPRR2AP35326 72 aa5.16□□□□□ -1.58
HDAC1-209ENST00000484305 COX7CP15954 63 aa5.15□□□□□ -1.59
HDAC1-209ENST00000484305 KRTAP10-12P60413 245 aa5.15□□□□□ -1.59
HDAC1-209ENST00000484305 LCE1AQ5T7P2 110 aa5.11□□□□□ -1.59
HDAC1-209ENST00000484305 CYSTM1Q9H1C7 97 aa5.11□□□□□ -1.59
HDAC1-209ENST00000484305 H7BZZ5 65 aa5.08□□□□□ -1.6
HDAC1-209ENST00000484305 KRTAP2-3P0C7H8 128 aa5.08□□□□□ -1.6
HDAC1-209ENST00000484305 KRTAP2-4Q9BYR9 128 aa5.08□□□□□ -1.6
HDAC1-209ENST00000484305 KRTAP23-1A1A580 65 aa5.07□□□□□ -1.6
HDAC1-209ENST00000484305 SEC61GP60059 68 aa5.04□□□□□ -1.6
HDAC1-209ENST00000484305 SERP1Q9Y6X1 66 aa5.04□□□□□ -1.6
HDAC1-209ENST00000484305 CAMK2N1Q7Z7J9 78 aa5.03□□□□□ -1.6
HDAC1-209ENST00000484305 A0A0D9SG42 100 aa5.01□□□□□ -1.61
HDAC1-209ENST00000484305 KRTAP5-3Q6L8H2 238 aa5□□□□□ -1.61
HDAC1-209ENST00000484305 SPATA8Q6RVD6 105 aa5□□□□□ -1.61
HDAC1-209ENST00000484305 SPRR2DP22532 72 aa4.99□□□□□ -1.61
HDAC1-209ENST00000484305 A0A1B0GU33 70 aa4.98□□□□□ -1.61
HDAC1-209ENST00000484305 ANAPC13Q9BS18 74 aa4.97□□□□□ -1.61
HDAC1-209ENST00000484305 KRTAP15-1Q3LI76 137 aa4.95□□□□□ -1.62
HDAC1-209ENST00000484305 SPINT4Q6UDR6 99 aa4.92□□□□□ -1.62
HDAC1-209ENST00000484305 KRTAP2-2Q9BYT5 123 aa4.92□□□□□ -1.62
HDAC1-209ENST00000484305 KRTAP2-1Q9BYU5 128 aa4.92□□□□□ -1.62
HDAC1-209ENST00000484305 KRTAP12-1P59990 96 aa4.9□□□□□ -1.63
HDAC1-209ENST00000484305 A0A1B0GU69 56 aa4.89□□□□□ -1.63
HDAC1-209ENST00000484305 CCDC179H3BU77 68 aa4.89□□□□□ -1.63
HDAC1-209ENST00000484305 KRTAP19-7Q3SYF9 63 aa4.85□□□□□ -1.63
HDAC1-209ENST00000484305 SMIM26A0A096LP01 95 aa4.82□□□□□ -1.64
HDAC1-209ENST00000484305 A8MU10 97 aa4.82□□□□□ -1.64
HDAC1-209ENST00000484305 MT1EP04732 61 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms