RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 CSAG1Q6PB30 78 aa12.51□□□□□ -0.41
SMDT1-203ENST00000484235 MT-ATP8P03928 68 aa12.47□□□□□ -0.41
SMDT1-203ENST00000484235 H3BPC8 53 aa12.43□□□□□ -0.42
SMDT1-203ENST00000484235 KLKP1Q107X0 134 aa12.43□□□□□ -0.42
SMDT1-203ENST00000484235 KRTAP3-3Q9BYR6 98 aa12.39□□□□□ -0.43
SMDT1-203ENST00000484235 A8MUN3 132 aa12.37□□□□□ -0.43
SMDT1-203ENST00000484235 FAM236AA0A1B0GUQ0 79 aa12.28□□□□□ -0.44
SMDT1-203ENST00000484235 FAM236BA0A1B0GV22 79 aa12.28□□□□□ -0.44
SMDT1-203ENST00000484235 SMIM20Q8N5G0 67 aa12.28□□□□□ -0.44
SMDT1-203ENST00000484235 NDUFC1O43677 76 aa12.25□□□□□ -0.45
SMDT1-203ENST00000484235 TRAV7A0A075B6U4 112 aa12.24□□□□□ -0.45
SMDT1-203ENST00000484235 MACF1Q9UPN3 7388 aaKnown RBP12.23□□□□□ -0.45
SMDT1-203ENST00000484235 SYNE2Q8WXH0 6885 aaKnown RBP12.19□□□□□ -0.46
SMDT1-203ENST00000484235 KRTAP19-6Q3LI70 58 aa12.18□□□□□ -0.46
SMDT1-203ENST00000484235 DMAC1Q96GE9 116 aa12.11□□□□□ -0.47
SMDT1-203ENST00000484235 H0YAA0 97 aa12.05□□□□□ -0.48
SMDT1-203ENST00000484235 SPRR2GQ9BYE4 73 aa12.03□□□□□ -0.48
SMDT1-203ENST00000484235 CRIPTQ9P021 101 aa11.99□□□□□ -0.49
SMDT1-203ENST00000484235 SERP2Q8N6R1 65 aa11.95□□□□□ -0.5
SMDT1-203ENST00000484235 SNURFQ9Y675 71 aa11.93□□□□□ -0.5
SMDT1-203ENST00000484235 ACYP2P14621 99 aa11.91□□□□□ -0.5
SMDT1-203ENST00000484235 KRTAP6-3Q3LI67 103 aa11.91□□□□□ -0.5
SMDT1-203ENST00000484235 ADM2Q7Z4H4 148 aa11.91□□□□□ -0.5
SMDT1-203ENST00000484235 KRTAP19-8Q3LI54 63 aa11.89□□□□□ -0.51
SMDT1-203ENST00000484235 Q5VV11 94 aa11.86□□□□□ -0.51
SMDT1-203ENST00000484235 C20orf197Q8N268 126 aa11.85□□□□□ -0.51
SMDT1-203ENST00000484235 MT1BP07438 61 aa11.82□□□□□ -0.52
SMDT1-203ENST00000484235 SPANXA2-OT1Q8N9U9 137 aa11.76□□□□□ -0.53
SMDT1-203ENST00000484235 SPTSSBQ8NFR3 76 aa11.71□□□□□ -0.53
SMDT1-203ENST00000484235 P0C880 135 aa11.67□□□□□ -0.54
SMDT1-203ENST00000484235 CHKB-CPT1BH3BT56 60 aa11.66□□□□□ -0.54
SMDT1-203ENST00000484235 COX7CP15954 63 aa11.66□□□□□ -0.54
SMDT1-203ENST00000484235 KRTAP3-2Q9BYR7 98 aa11.64□□□□□ -0.55
SMDT1-203ENST00000484235 R4GN34 69 aa11.59□□□□□ -0.55
SMDT1-203ENST00000484235 A6NN06 94 aa11.58□□□□□ -0.56
SMDT1-203ENST00000484235 NEBP20929 6669 aa11.55□□□□□ -0.56
SMDT1-203ENST00000484235 KRTAP10-5P60370 271 aa11.5□□□□□ -0.57
SMDT1-203ENST00000484235 M0QZ58 72 aa11.49□□□□□ -0.57
SMDT1-203ENST00000484235 MUC12Q9UKN1 5478 aa11.46□□□□□ -0.57
SMDT1-203ENST00000484235 H7BZZ5 65 aa11.41□□□□□ -0.58
SMDT1-203ENST00000484235 ANAPC13Q9BS18 74 aa11.41□□□□□ -0.58
SMDT1-203ENST00000484235 CYSTM1Q9H1C7 97 aa11.39□□□□□ -0.59
SMDT1-203ENST00000484235 COA5Q86WW8 74 aa11.38□□□□□ -0.59
SMDT1-203ENST00000484235 PLAC4Q8WY50 150 aa11.38□□□□□ -0.59
SMDT1-203ENST00000484235 LINC01554Q52M75 96 aa11.31□□□□□ -0.6
SMDT1-203ENST00000484235 PRO2289Q9P1D8 64 aa11.24□□□□□ -0.61
SMDT1-203ENST00000484235 KRTAP20-1Q3LI63 56 aa11.21□□□□□ -0.61
SMDT1-203ENST00000484235 MT1XP80297 61 aa11.18□□□□□ -0.62
SMDT1-203ENST00000484235 KRTAP5-9P26371 169 aa11.17□□□□□ -0.62
SMDT1-203ENST00000484235 CCDC179H3BU77 68 aa11.16□□□□□ -0.62
SMDT1-203ENST00000484235 KMT2DO14686 5537 aa11.14□□□□□ -0.63
SMDT1-203ENST00000484235 SEC61GP60059 68 aa11.11□□□□□ -0.63
SMDT1-203ENST00000484235 MDN1Q9NU22 5596 aa11.08□□□□□ -0.64
SMDT1-203ENST00000484235 SERP1Q9Y6X1 66 aa11.07□□□□□ -0.64
SMDT1-203ENST00000484235 KRTAP13-4Q3LI77 160 aa11.02□□□□□ -0.65
SMDT1-203ENST00000484235 ATP5EP56381 51 aaPredicted RBP10.95□□□□□ -0.66
SMDT1-203ENST00000484235 A0A1B0GU33 70 aa10.87□□□□□ -0.67
SMDT1-203ENST00000484235 KRTAP12-2P59991 146 aa10.87□□□□□ -0.67
SMDT1-203ENST00000484235 A0A1B0GU69 56 aa10.81□□□□□ -0.68
SMDT1-203ENST00000484235 KRTAP2-3P0C7H8 128 aa10.81□□□□□ -0.68
SMDT1-203ENST00000484235 KRTAP2-4Q9BYR9 128 aa10.81□□□□□ -0.68
SMDT1-203ENST00000484235 TMEM258P61165 79 aa10.78□□□□□ -0.68
SMDT1-203ENST00000484235 SPATA8Q6RVD6 105 aa10.78□□□□□ -0.68
SMDT1-203ENST00000484235 A0A0D9SG42 100 aa10.73□□□□□ -0.69
SMDT1-203ENST00000484235 CAMK2N1Q7Z7J9 78 aa10.7□□□□□ -0.7
SMDT1-203ENST00000484235 KRTAP10-7P60409 375 aaPredicted RBP10.66□□□□□ -0.7
SMDT1-203ENST00000484235 KRTAP8-1Q8IUC2 63 aa10.65□□□□□ -0.7
SMDT1-203ENST00000484235 KRTAP10-12P60413 245 aa10.64□□□□□ -0.71
SMDT1-203ENST00000484235 SPRR2FQ96RM1 72 aa10.64□□□□□ -0.71
SMDT1-203ENST00000484235 PRR15LQ9BU68 103 aa10.61□□□□□ -0.71
SMDT1-203ENST00000484235 SPRR2EP22531 72 aa10.59□□□□□ -0.71
SMDT1-203ENST00000484235 SPRR2BP35325 72 aa10.59□□□□□ -0.71
SMDT1-203ENST00000484235 SPRR2AP35326 72 aa10.59□□□□□ -0.71
SMDT1-203ENST00000484235 KRTAP4-8A0A0G2JLE6 195 aa10.58□□□□□ -0.72
SMDT1-203ENST00000484235 KRTAP4-8Q9BYQ9 185 aa10.58□□□□□ -0.72
SMDT1-203ENST00000484235 SMIM26A0A096LP01 95 aa10.57□□□□□ -0.72
SMDT1-203ENST00000484235 SPINT4Q6UDR6 99 aa10.57□□□□□ -0.72
SMDT1-203ENST00000484235 LINC01558Q9Y6Z2 57 aa10.56□□□□□ -0.72
SMDT1-203ENST00000484235 KRTAP12-1P59990 96 aa10.53□□□□□ -0.72
SMDT1-203ENST00000484235 LCE1AQ5T7P2 110 aa10.47□□□□□ -0.73
SMDT1-203ENST00000484235 A8MU10 97 aa10.44□□□□□ -0.74
SMDT1-203ENST00000484235 KRTAP2-2Q9BYT5 123 aa10.44□□□□□ -0.74
SMDT1-203ENST00000484235 KRTAP2-1Q9BYU5 128 aa10.44□□□□□ -0.74
SMDT1-203ENST00000484235 UQCR11O14957 56 aa10.26□□□□□ -0.77
SMDT1-203ENST00000484235 SPRR2DP22532 72 aa10.24□□□□□ -0.77
SMDT1-203ENST00000484235 V9GYY9 64 aa10.17□□□□□ -0.78
SMDT1-203ENST00000484235 Q1T7F1 81 aa10.11□□□□□ -0.79
SMDT1-203ENST00000484235 C10orf95Q9H7T3 257 aa10.05□□□□□ -0.8
SMDT1-203ENST00000484235 PCP4P48539 62 aa10.04□□□□□ -0.8
SMDT1-203ENST00000484235 MIR22HGQ0VDD5 57 aa10.04□□□□□ -0.8
SMDT1-203ENST00000484235 PSPHP1O15172 72 aa10.03□□□□□ -0.8
SMDT1-203ENST00000484235 LCE3BQ5TA77 95 aa10.03□□□□□ -0.8
SMDT1-203ENST00000484235 KRTAP19-7Q3SYF9 63 aa9.98□□□□□ -0.81
SMDT1-203ENST00000484235 TNP1P09430 55 aa9.97□□□□□ -0.81
SMDT1-203ENST00000484235 RPS28P62857 69 aaKnown RBP9.9□□□□□ -0.82
SMDT1-203ENST00000484235 MT1EP04732 61 aa9.88□□□□□ -0.83
SMDT1-203ENST00000484235 KRTAP19-5Q3LI72 72 aa9.83□□□□□ -0.84
SMDT1-203ENST00000484235 K7ERS5 55 aa9.81□□□□□ -0.84
SMDT1-203ENST00000484235 LCE3AQ5TA76 89 aa9.76□□□□□ -0.85
SMDT1-203ENST00000484235 LCE5AQ5TCM9 118 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms