RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 C5orf47Q569G3 176 aa4.9□□□□□ -1.63
CPSF4-213ENST00000484112 C20orf197Q8N268 126 aa4.9□□□□□ -1.63
CPSF4-213ENST00000484112 NDUFC1O43677 76 aa4.89□□□□□ -1.63
CPSF4-213ENST00000484112 CYSTM1Q9H1C7 97 aa4.88□□□□□ -1.63
CPSF4-213ENST00000484112 H3BPC8 53 aa4.87□□□□□ -1.63
CPSF4-213ENST00000484112 TMEM258P61165 79 aa4.87□□□□□ -1.63
CPSF4-213ENST00000484112 H1FX-AS1Q4G0G2 97 aa4.87□□□□□ -1.63
CPSF4-213ENST00000484112 H7BZZ5 65 aa4.86□□□□□ -1.63
CPSF4-213ENST00000484112 KRTAP19-6Q3LI70 58 aa4.84□□□□□ -1.63
CPSF4-213ENST00000484112 SNURFQ9Y675 71 aa4.84□□□□□ -1.63
CPSF4-213ENST00000484112 TRAV22A0A0B4J277 110 aa4.83□□□□□ -1.64
CPSF4-213ENST00000484112 MP68P56378 58 aa4.83□□□□□ -1.64
CPSF4-213ENST00000484112 LOC101927531A0A1B0GV80 90 aa4.82□□□□□ -1.64
CPSF4-213ENST00000484112 H0Y9P7 68 aa4.81□□□□□ -1.64
CPSF4-213ENST00000484112 ATP5EP56381 51 aaPredicted RBP4.81□□□□□ -1.64
CPSF4-213ENST00000484112 C4orf26Q17RF5 130 aa4.8□□□□□ -1.64
CPSF4-213ENST00000484112 KRTAP6-3Q3LI67 103 aa4.79□□□□□ -1.64
CPSF4-213ENST00000484112 CYP4F30PQ9H0H9 118 aa4.79□□□□□ -1.64
CPSF4-213ENST00000484112 RPS28P62857 69 aaKnown RBP4.77□□□□□ -1.65
CPSF4-213ENST00000484112 LINC00208Q96KT6 92 aa4.77□□□□□ -1.65
CPSF4-213ENST00000484112 C1orf64Q8NEQ6 169 aa4.76□□□□□ -1.65
CPSF4-213ENST00000484112 SPANXA2-OT1Q8N9U9 137 aa4.74□□□□□ -1.65
CPSF4-213ENST00000484112 KRTAP3-1Q9BYR8 98 aa4.73□□□□□ -1.65
CPSF4-213ENST00000484112 SERP1Q9Y6X1 66 aa4.72□□□□□ -1.65
CPSF4-213ENST00000484112 S4R3F8 94 aa4.72□□□□□ -1.65
CPSF4-213ENST00000484112 CSAG1Q6PB30 78 aa4.7□□□□□ -1.66
CPSF4-213ENST00000484112 A8MUN3 132 aa4.69□□□□□ -1.66
CPSF4-213ENST00000484112 LCA10Q71F78 164 aa4.67□□□□□ -1.66
CPSF4-213ENST00000484112 NEBP20929 6669 aa4.66□□□□□ -1.66
CPSF4-213ENST00000484112 KRTAP3-3Q9BYR6 98 aa4.61□□□□□ -1.67
CPSF4-213ENST00000484112 SMIM26A0A096LP01 95 aa4.6□□□□□ -1.67
CPSF4-213ENST00000484112 KRTAP20-1Q3LI63 56 aa4.59□□□□□ -1.67
CPSF4-213ENST00000484112 DMAC1Q96GE9 116 aa4.58□□□□□ -1.68
CPSF4-213ENST00000484112 MUC12Q9UKN1 5478 aa4.58□□□□□ -1.68
CPSF4-213ENST00000484112 A6NN06 94 aa4.57□□□□□ -1.68
CPSF4-213ENST00000484112 H0YAA0 97 aa4.56□□□□□ -1.68
CPSF4-213ENST00000484112 COA5Q86WW8 74 aa4.55□□□□□ -1.68
CPSF4-213ENST00000484112 CRIPTQ9P021 101 aa4.55□□□□□ -1.68
CPSF4-213ENST00000484112 ACYP2P14621 99 aa4.54□□□□□ -1.68
CPSF4-213ENST00000484112 SPRR2GQ9BYE4 73 aa4.52□□□□□ -1.69
CPSF4-213ENST00000484112 Q1T7F1 81 aa4.51□□□□□ -1.69
CPSF4-213ENST00000484112 V9GYY9 64 aa4.5□□□□□ -1.69
CPSF4-213ENST00000484112 Q5VV11 94 aa4.48□□□□□ -1.69
CPSF4-213ENST00000484112 MT1BP07438 61 aa4.47□□□□□ -1.69
CPSF4-213ENST00000484112 KRTAP19-8Q3LI54 63 aa4.46□□□□□ -1.7
CPSF4-213ENST00000484112 SPTSSBQ8NFR3 76 aa4.44□□□□□ -1.7
CPSF4-213ENST00000484112 CHKB-CPT1BH3BT56 60 aa4.43□□□□□ -1.7
CPSF4-213ENST00000484112 KRTAP5-9P26371 169 aa4.43□□□□□ -1.7
CPSF4-213ENST00000484112 KRTAP10-5P60370 271 aa4.43□□□□□ -1.7
CPSF4-213ENST00000484112 ADM2Q7Z4H4 148 aa4.43□□□□□ -1.7
CPSF4-213ENST00000484112 LINC01558Q9Y6Z2 57 aa4.43□□□□□ -1.7
CPSF4-213ENST00000484112 KRTAP2-3P0C7H8 128 aa4.39□□□□□ -1.71
CPSF4-213ENST00000484112 KRTAP2-4Q9BYR9 128 aa4.39□□□□□ -1.71
CPSF4-213ENST00000484112 KMT2DO14686 5537 aa4.38□□□□□ -1.71
CPSF4-213ENST00000484112 MDN1Q9NU22 5596 aa4.37□□□□□ -1.71
CPSF4-213ENST00000484112 R4GN34 69 aa4.35□□□□□ -1.71
CPSF4-213ENST00000484112 PSPHP1O15172 72 aa4.34□□□□□ -1.71
CPSF4-213ENST00000484112 PRR15LQ9BU68 103 aa4.34□□□□□ -1.71
CPSF4-213ENST00000484112 P0C880 135 aa4.32□□□□□ -1.72
CPSF4-213ENST00000484112 KRTAP3-2Q9BYR7 98 aa4.32□□□□□ -1.72
CPSF4-213ENST00000484112 SPRR2EP22531 72 aa4.3□□□□□ -1.72
CPSF4-213ENST00000484112 SPRR2BP35325 72 aa4.3□□□□□ -1.72
CPSF4-213ENST00000484112 SPRR2AP35326 72 aa4.3□□□□□ -1.72
CPSF4-213ENST00000484112 A0A1B0GU69 56 aa4.29□□□□□ -1.72
CPSF4-213ENST00000484112 M0QZ58 72 aa4.29□□□□□ -1.72
CPSF4-213ENST00000484112 SPRR2FQ96RM1 72 aa4.29□□□□□ -1.72
CPSF4-213ENST00000484112 PLAC4Q8WY50 150 aa4.27□□□□□ -1.73
CPSF4-213ENST00000484112 PRO2289Q9P1D8 64 aa4.25□□□□□ -1.73
CPSF4-213ENST00000484112 SEC61GP60059 68 aa4.24□□□□□ -1.73
CPSF4-213ENST00000484112 PRO0628Q9UI54 55 aa4.24□□□□□ -1.73
CPSF4-213ENST00000484112 A6NED7 52 aa4.23□□□□□ -1.73
CPSF4-213ENST00000484112 BRK1Q8WUW1 75 aa4.23□□□□□ -1.73
CPSF4-213ENST00000484112 KRTAP2-2Q9BYT5 123 aa4.23□□□□□ -1.73
CPSF4-213ENST00000484112 KRTAP2-1Q9BYU5 128 aa4.23□□□□□ -1.73
CPSF4-213ENST00000484112 CDC42SE1Q9NRR8 79 aa4.21□□□□□ -1.74
CPSF4-213ENST00000484112 UQCR11O14957 56 aa4.2□□□□□ -1.74
CPSF4-213ENST00000484112 KRTAP8-1Q8IUC2 63 aa4.19□□□□□ -1.74
CPSF4-213ENST00000484112 LINC01554Q52M75 96 aa4.18□□□□□ -1.74
CPSF4-213ENST00000484112 SPATA8Q6RVD6 105 aa4.18□□□□□ -1.74
CPSF4-213ENST00000484112 LCE1AQ5T7P2 110 aa4.17□□□□□ -1.74
CPSF4-213ENST00000484112 SPRR2DP22532 72 aa4.16□□□□□ -1.74
CPSF4-213ENST00000484112 MT1XP80297 61 aa4.16□□□□□ -1.74
CPSF4-213ENST00000484112 A0A1B0GU33 70 aa4.14□□□□□ -1.75
CPSF4-213ENST00000484112 MIR22HGQ0VDD5 57 aa4.14□□□□□ -1.75
CPSF4-213ENST00000484112 A8MU10 97 aa4.13□□□□□ -1.75
CPSF4-213ENST00000484112 KRTAP12-2P59991 146 aa4.1□□□□□ -1.75
CPSF4-213ENST00000484112 SVIPQ8NHG7 77 aa4.09□□□□□ -1.75
CPSF4-213ENST00000484112 KRTAP4-8A0A0G2JLE6 195 aa4.08□□□□□ -1.76
CPSF4-213ENST00000484112 KRTAP4-8Q9BYQ9 185 aa4.08□□□□□ -1.76
CPSF4-213ENST00000484112 KRTAP13-4Q3LI77 160 aa4.07□□□□□ -1.76
CPSF4-213ENST00000484112 LCE3BQ5TA77 95 aa4.06□□□□□ -1.76
CPSF4-213ENST00000484112 PMAIP1Q13794 54 aa4.01□□□□□ -1.77
CPSF4-213ENST00000484112 CAMK2N1Q7Z7J9 78 aa4.01□□□□□ -1.77
CPSF4-213ENST00000484112 KRTAP10-12P60413 245 aa3.99□□□□□ -1.77
CPSF4-213ENST00000484112 A0A0D9SG42 100 aa3.96□□□□□ -1.78
CPSF4-213ENST00000484112 KRTAP10-7P60409 375 aaPredicted RBP3.96□□□□□ -1.78
CPSF4-213ENST00000484112 GPR98Q8WXG9 6306 aa3.95□□□□□ -1.78
CPSF4-213ENST00000484112 K7ERS5 55 aa3.94□□□□□ -1.78
CPSF4-213ENST00000484112 SPINT4Q6UDR6 99 aa3.93□□□□□ -1.78
CPSF4-213ENST00000484112 KRTAP12-1P59990 96 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms