RNA–Protein interactions for RNA: ENST00000483414.1

LIMK1-205, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 3,374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-205ENST00000483414 ACYP2P14621 99 aa5.41□□□□□ -1.54
LIMK1-205ENST00000483414 ASB16-AS1Q495Z4 193 aa5.41□□□□□ -1.54
LIMK1-205ENST00000483414 LINC01558Q9Y6Z2 57 aa5.41□□□□□ -1.54
LIMK1-205ENST00000483414 MUC17Q685J3 4493 aa5.41□□□□□ -1.54
LIMK1-205ENST00000483414 SPINK1P00995 79 aa5.41□□□□□ -1.54
LIMK1-205ENST00000483414 H3BS24 57 aa5.39□□□□□ -1.55
LIMK1-205ENST00000483414 LRP2P98164 4655 aa5.36□□□□□ -1.55
LIMK1-205ENST00000483414 A0A1B0GU69 56 aa5.34□□□□□ -1.55
LIMK1-205ENST00000483414 CSAG1Q6PB30 78 aa5.31□□□□□ -1.56
LIMK1-205ENST00000483414 C9orf92A6NGG3 77 aa5.3□□□□□ -1.56
LIMK1-205ENST00000483414 LINC01554Q52M75 96 aa5.29□□□□□ -1.56
LIMK1-205ENST00000483414 UBR4Q5T4S7 5183 aa5.28□□□□□ -1.56
LIMK1-205ENST00000483414 CRIPTQ9P021 101 aa5.27□□□□□ -1.57
LIMK1-205ENST00000483414 KRTAP13-3Q3SY46 172 aa5.27□□□□□ -1.57
LIMK1-205ENST00000483414 DMAC1Q96GE9 116 aa5.27□□□□□ -1.57
LIMK1-205ENST00000483414 TPRXLQ17RH7 258 aa5.25□□□□□ -1.57
LIMK1-205ENST00000483414 MIR22HGQ0VDD5 57 aa5.24□□□□□ -1.57
LIMK1-205ENST00000483414 KRTAP16-1A8MUX0 517 aa5.24□□□□□ -1.57
LIMK1-205ENST00000483414 UQCR11O14957 56 aa5.2□□□□□ -1.58
LIMK1-205ENST00000483414 MUC2Q02817 5179 aa5.2□□□□□ -1.58
LIMK1-205ENST00000483414 XP32Q5T750 250 aa5.18□□□□□ -1.58
LIMK1-205ENST00000483414 RNF213Q63HN8 5207 aa5.17□□□□□ -1.58
LIMK1-205ENST00000483414 SPATA8Q6RVD6 105 aa5.15□□□□□ -1.59
LIMK1-205ENST00000483414 C20orf166-AS1Q96NR2 134 aa5.14□□□□□ -1.59
LIMK1-205ENST00000483414 A8MUU9 505 aa5.13□□□□□ -1.59
LIMK1-205ENST00000483414 RPL37P61927 97 aaKnown RBP5.09□□□□□ -1.59
LIMK1-205ENST00000483414 KRTAP4-1Q9BYQ7 146 aa5.08□□□□□ -1.6
LIMK1-205ENST00000483414 FLGP20930 4061 aaPredicted RBP5.05□□□□□ -1.6
LIMK1-205ENST00000483414 H0YAA0 97 aa5.04□□□□□ -1.6
LIMK1-205ENST00000483414 A0A1B0GU33 70 aa5.02□□□□□ -1.61
LIMK1-205ENST00000483414 KRTAP19-2Q3LHN2 52 aa5.01□□□□□ -1.61
LIMK1-205ENST00000483414 FAT4Q6V0I7 4981 aa4.98□□□□□ -1.61
LIMK1-205ENST00000483414 KRTAP25-1Q3LHN0 102 aa4.97□□□□□ -1.61
LIMK1-205ENST00000483414 ROMO1P60602 79 aa4.96□□□□□ -1.61
LIMK1-205ENST00000483414 KRTAP3-1Q9BYR8 98 aa4.96□□□□□ -1.61
LIMK1-205ENST00000483414 A0A0D9SG42 100 aa4.95□□□□□ -1.62
LIMK1-205ENST00000483414 K7ERS5 55 aa4.95□□□□□ -1.62
LIMK1-205ENST00000483414 SEC61BP60468 96 aaKnown RBP4.95□□□□□ -1.62
LIMK1-205ENST00000483414 A0A0A0MQY5 61 aa4.94□□□□□ -1.62
LIMK1-205ENST00000483414 COX6B2Q6YFQ2 88 aa4.93□□□□□ -1.62
LIMK1-205ENST00000483414 P0C880 135 aa4.93□□□□□ -1.62
LIMK1-205ENST00000483414 H1FX-AS1Q4G0G2 97 aa4.93□□□□□ -1.62
LIMK1-205ENST00000483414 LCE2CQ5TA81 110 aa4.92□□□□□ -1.62
LIMK1-205ENST00000483414 C10orf95Q9H7T3 257 aa4.91□□□□□ -1.62
LIMK1-205ENST00000483414 LCE2BO14633 110 aa4.9□□□□□ -1.63
LIMK1-205ENST00000483414 SPINT4Q6UDR6 99 aa4.86□□□□□ -1.63
LIMK1-205ENST00000483414 S4R3F8 94 aa4.82□□□□□ -1.64
LIMK1-205ENST00000483414 NDUFAF8A1L188 74 aa4.8□□□□□ -1.64
LIMK1-205ENST00000483414 LCE2AQ5TA79 106 aaPredicted RBP4.79□□□□□ -1.64
LIMK1-205ENST00000483414 KRTAP13-4Q3LI77 160 aa4.78□□□□□ -1.65
LIMK1-205ENST00000483414 MT1HP80294 61 aa4.76□□□□□ -1.65
LIMK1-205ENST00000483414 KRTAP10-6P60371 365 aaPredicted RBP4.71□□□□□ -1.66
LIMK1-205ENST00000483414 LORP23490 312 aaPredicted RBP4.63□□□□□ -1.67
LIMK1-205ENST00000483414 KRTAP12-2P59991 146 aa4.62□□□□□ -1.67
LIMK1-205ENST00000483414 KRTAP9-8Q9BYQ0 159 aa4.59□□□□□ -1.67
LIMK1-205ENST00000483414 M0QZ58 72 aa4.59□□□□□ -1.68
LIMK1-205ENST00000483414 KRTAP15-1Q3LI76 137 aa4.58□□□□□ -1.68
LIMK1-205ENST00000483414 R4GN34 69 aa4.57□□□□□ -1.68
LIMK1-205ENST00000483414 M0R2T5 61 aa4.55□□□□□ -1.68
LIMK1-205ENST00000483414 KRTAP12-1P59990 96 aa4.53□□□□□ -1.68
LIMK1-205ENST00000483414 MT2AP02795 61 aa4.51□□□□□ -1.69
LIMK1-205ENST00000483414 MT1FP04733 61 aa4.49□□□□□ -1.69
LIMK1-205ENST00000483414 KRTAP9-3Q9BYQ3 159 aa4.43□□□□□ -1.7
LIMK1-205ENST00000483414 CAMK2N1Q7Z7J9 78 aa4.41□□□□□ -1.7
LIMK1-205ENST00000483414 USH2AO75445 5202 aa4.36□□□□□ -1.71
LIMK1-205ENST00000483414 KRTAP23-1A1A580 65 aa4.36□□□□□ -1.71
LIMK1-205ENST00000483414 KRTAP19-1Q8IUB9 90 aa4.36□□□□□ -1.71
LIMK1-205ENST00000483414 SPRR2GQ9BYE4 73 aa4.33□□□□□ -1.72
LIMK1-205ENST00000483414 LUZP6Q538Z0 58 aa4.33□□□□□ -1.72
LIMK1-205ENST00000483414 KRTAP10-10P60014 251 aa4.31□□□□□ -1.72
LIMK1-205ENST00000483414 PLAC4Q8WY50 150 aa4.31□□□□□ -1.72
LIMK1-205ENST00000483414 SSPOA2VEC9 5147 aa4.28□□□□□ -1.72
LIMK1-205ENST00000483414 KRTAP9-2Q9BYQ4 174 aa4.28□□□□□ -1.72
LIMK1-205ENST00000483414 KRTAP19-8Q3LI54 63 aa4.26□□□□□ -1.73
LIMK1-205ENST00000483414 FSIP2Q5CZC0 6907 aa4.24□□□□□ -1.73
LIMK1-205ENST00000483414 MT1BP07438 61 aa4.23□□□□□ -1.73
LIMK1-205ENST00000483414 TNP1P09430 55 aa4.13□□□□□ -1.75
LIMK1-205ENST00000483414 KRTAP19-6Q3LI70 58 aa4.12□□□□□ -1.75
LIMK1-205ENST00000483414 LOC100996750A0A140TA64 210 aa4.1□□□□□ -1.75
LIMK1-205ENST00000483414 KRTAP4-6Q9BYQ5 205 aa4.1□□□□□ -1.75
LIMK1-205ENST00000483414 FCGBPQ9Y6R7 5405 aaPredicted RBP4.09□□□□□ -1.76
LIMK1-205ENST00000483414 PP632Q6XCG6 107 aa4.08□□□□□ -1.76
LIMK1-205ENST00000483414 CRCT1Q9UGL9 99 aa4.06□□□□□ -1.76
LIMK1-205ENST00000483414 MT1XP80297 61 aa4.04□□□□□ -1.76
LIMK1-205ENST00000483414 KRTAP10-5P60370 271 aa4.03□□□□□ -1.76
LIMK1-205ENST00000483414 KRTAP9-6A0A140TA67 174 aa4□□□□□ -1.77
LIMK1-205ENST00000483414 MACF1Q9UPN3 7388 aaKnown RBP3.92□□□□□ -1.78
LIMK1-205ENST00000483414 KMT2DO14686 5537 aa3.89□□□□□ -1.79
LIMK1-205ENST00000483414 LCE3AQ5TA76 89 aa3.86□□□□□ -1.79
LIMK1-205ENST00000483414 KRTAP10-12P60413 245 aa3.85□□□□□ -1.79
LIMK1-205ENST00000483414 KRTAP10-7P60409 375 aaPredicted RBP3.85□□□□□ -1.79
LIMK1-205ENST00000483414 PRO2289Q9P1D8 64 aa3.83□□□□□ -1.8
LIMK1-205ENST00000483414 SYNE2Q8WXH0 6885 aaKnown RBP3.83□□□□□ -1.8
LIMK1-205ENST00000483414 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.82□□□□□ -1.8
LIMK1-205ENST00000483414 KRTAP4-8Q9BYQ9 185 aa3.75□□□□□ -1.81
LIMK1-205ENST00000483414 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
LIMK1-205ENST00000483414 SPRR5A0A1B0GTR4 108 aa3.74□□□□□ -1.81
LIMK1-205ENST00000483414 KRTAP4-8A0A0G2JLE6 195 aa3.73□□□□□ -1.81
LIMK1-205ENST00000483414 LCE3BQ5TA77 95 aa3.72□□□□□ -1.81
LIMK1-205ENST00000483414 KRTAP5-9P26371 169 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms