RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 A8MUU9 505 aa8.02□□□□□ -1.13
ATG4B-220ENST00000482507 C20orf166-AS1Q96NR2 134 aa8.02□□□□□ -1.13
ATG4B-220ENST00000482507 DMBT1Q9UGM3 2413 aaPredicted RBP8.02□□□□□ -1.13
ATG4B-220ENST00000482507 ADM2Q7Z4H4 148 aa8.02□□□□□ -1.13
ATG4B-220ENST00000482507 PRAC1Q96KF2 57 aa8.01□□□□□ -1.13
ATG4B-220ENST00000482507 KRTAP3-1Q9BYR8 98 aa8□□□□□ -1.13
ATG4B-220ENST00000482507 KRTAP10-8P60410 259 aa7.99□□□□□ -1.13
ATG4B-220ENST00000482507 PCLOQ9Y6V0 5065 aa7.97□□□□□ -1.13
ATG4B-220ENST00000482507 MT1HL1P0DM35 61 aa7.95□□□□□ -1.14
ATG4B-220ENST00000482507 LINC01554Q52M75 96 aa7.88□□□□□ -1.15
ATG4B-220ENST00000482507 H0YAA0 97 aa7.87□□□□□ -1.15
ATG4B-220ENST00000482507 J3QL48 77 aa7.81□□□□□ -1.16
ATG4B-220ENST00000482507 A0A1B0GU33 70 aa7.78□□□□□ -1.16
ATG4B-220ENST00000482507 COX6B2Q6YFQ2 88 aa7.78□□□□□ -1.16
ATG4B-220ENST00000482507 H1FX-AS1Q4G0G2 97 aa7.76□□□□□ -1.17
ATG4B-220ENST00000482507 HERC1Q15751 4861 aa7.75□□□□□ -1.17
ATG4B-220ENST00000482507 CSAG1Q6PB30 78 aa7.73□□□□□ -1.17
ATG4B-220ENST00000482507 LPAP08519 4548 aa7.67□□□□□ -1.18
ATG4B-220ENST00000482507 KRTAP3-3Q9BYR6 98 aa7.66□□□□□ -1.18
ATG4B-220ENST00000482507 RPL37P61927 97 aaKnown RBP7.63□□□□□ -1.19
ATG4B-220ENST00000482507 XP32Q5T750 250 aa7.61□□□□□ -1.19
ATG4B-220ENST00000482507 KRTAP10-6P60371 365 aaPredicted RBP7.6□□□□□ -1.19
ATG4B-220ENST00000482507 LRP2P98164 4655 aa7.58□□□□□ -1.2
ATG4B-220ENST00000482507 KRTAP13-4Q3LI77 160 aa7.55□□□□□ -1.2
ATG4B-220ENST00000482507 KRTAP3-2Q9BYR7 98 aa7.55□□□□□ -1.2
ATG4B-220ENST00000482507 KRTAP25-1Q3LHN0 102 aa7.5□□□□□ -1.21
ATG4B-220ENST00000482507 HMCN2Q8NDA2 5059 aa7.5□□□□□ -1.21
ATG4B-220ENST00000482507 S4R3F8 94 aa7.5□□□□□ -1.21
ATG4B-220ENST00000482507 TPRXLQ17RH7 258 aa7.47□□□□□ -1.21
ATG4B-220ENST00000482507 CRIPTQ9P021 101 aa7.47□□□□□ -1.21
ATG4B-220ENST00000482507 K7ERS5 55 aa7.44□□□□□ -1.22
ATG4B-220ENST00000482507 P0C880 135 aa7.44□□□□□ -1.22
ATG4B-220ENST00000482507 A0A0D9SG42 100 aa7.44□□□□□ -1.22
ATG4B-220ENST00000482507 MUC2Q02817 5179 aa7.39□□□□□ -1.23
ATG4B-220ENST00000482507 A0A0A0MQY5 61 aa7.39□□□□□ -1.23
ATG4B-220ENST00000482507 ROMO1P60602 79 aa7.36□□□□□ -1.23
ATG4B-220ENST00000482507 UBR4Q5T4S7 5183 aa7.35□□□□□ -1.23
ATG4B-220ENST00000482507 KRTAP12-2P59991 146 aa7.28□□□□□ -1.24
ATG4B-220ENST00000482507 RNF213Q63HN8 5207 aa7.27□□□□□ -1.25
ATG4B-220ENST00000482507 KRTAP4-1Q9BYQ7 146 aa7.22□□□□□ -1.25
ATG4B-220ENST00000482507 SEC61BP60468 96 aaKnown RBP7.22□□□□□ -1.25
ATG4B-220ENST00000482507 KRTAP12-1P59990 96 aa7.21□□□□□ -1.25
ATG4B-220ENST00000482507 C10orf95Q9H7T3 257 aa7.2□□□□□ -1.26
ATG4B-220ENST00000482507 SPINT4Q6UDR6 99 aa7.16□□□□□ -1.26
ATG4B-220ENST00000482507 MUC17Q685J3 4493 aa7.14□□□□□ -1.27
ATG4B-220ENST00000482507 M0QZ58 72 aa7.1□□□□□ -1.27
ATG4B-220ENST00000482507 FAT4Q6V0I7 4981 aa7.03□□□□□ -1.28
ATG4B-220ENST00000482507 LORP23490 312 aaPredicted RBP6.99□□□□□ -1.29
ATG4B-220ENST00000482507 R4GN34 69 aa6.95□□□□□ -1.3
ATG4B-220ENST00000482507 KRTAP19-2Q3LHN2 52 aa6.93□□□□□ -1.3
ATG4B-220ENST00000482507 KRTAP15-1Q3LI76 137 aa6.88□□□□□ -1.31
ATG4B-220ENST00000482507 LCE2CQ5TA81 110 aa6.85□□□□□ -1.31
ATG4B-220ENST00000482507 NDUFAF8A1L188 74 aa6.83□□□□□ -1.32
ATG4B-220ENST00000482507 FLGP20930 4061 aaPredicted RBP6.8□□□□□ -1.32
ATG4B-220ENST00000482507 MT1HP80294 61 aa6.71□□□□□ -1.33
ATG4B-220ENST00000482507 M0R2T5 61 aa6.68□□□□□ -1.34
ATG4B-220ENST00000482507 LUZP6Q538Z0 58 aa6.68□□□□□ -1.34
ATG4B-220ENST00000482507 CAMK2N1Q7Z7J9 78 aa6.59□□□□□ -1.35
ATG4B-220ENST00000482507 PLAC4Q8WY50 150 aa6.53□□□□□ -1.36
ATG4B-220ENST00000482507 LCE2AQ5TA79 106 aaPredicted RBP6.52□□□□□ -1.37
ATG4B-220ENST00000482507 PP632Q6XCG6 107 aa6.45□□□□□ -1.38
ATG4B-220ENST00000482507 KRTAP9-8Q9BYQ0 159 aa6.45□□□□□ -1.38
ATG4B-220ENST00000482507 MT2AP02795 61 aa6.41□□□□□ -1.38
ATG4B-220ENST00000482507 MT1FP04733 61 aa6.4□□□□□ -1.39
ATG4B-220ENST00000482507 KRTAP10-10P60014 251 aa6.38□□□□□ -1.39
ATG4B-220ENST00000482507 TNP1P09430 55 aa6.34□□□□□ -1.4
ATG4B-220ENST00000482507 KRTAP19-1Q8IUB9 90 aa6.33□□□□□ -1.4
ATG4B-220ENST00000482507 SPRR2GQ9BYE4 73 aa6.31□□□□□ -1.4
ATG4B-220ENST00000482507 KRTAP23-1A1A580 65 aa6.24□□□□□ -1.41
ATG4B-220ENST00000482507 KRTAP9-3Q9BYQ3 159 aa6.21□□□□□ -1.42
ATG4B-220ENST00000482507 FSIP2Q5CZC0 6907 aa6.2□□□□□ -1.42
ATG4B-220ENST00000482507 USH2AO75445 5202 aa6.18□□□□□ -1.42
ATG4B-220ENST00000482507 SPRR5A0A1B0GTR4 108 aa6.12□□□□□ -1.43
ATG4B-220ENST00000482507 LCE2BO14633 110 aa6.1□□□□□ -1.43
ATG4B-220ENST00000482507 LCE3AQ5TA76 89 aa6.08□□□□□ -1.44
ATG4B-220ENST00000482507 KRTAP19-8Q3LI54 63 aa6.03□□□□□ -1.44
ATG4B-220ENST00000482507 MT1BP07438 61 aa6□□□□□ -1.45
ATG4B-220ENST00000482507 KRTAP10-5P60370 271 aa5.97□□□□□ -1.45
ATG4B-220ENST00000482507 MT1XP80297 61 aa5.95□□□□□ -1.46
ATG4B-220ENST00000482507 SSPOA2VEC9 5147 aa5.92□□□□□ -1.46
ATG4B-220ENST00000482507 KRTAP8-1Q8IUC2 63 aa5.9□□□□□ -1.46
ATG4B-220ENST00000482507 LCE2DQ5TA82 110 aaPredicted RBP5.9□□□□□ -1.47
ATG4B-220ENST00000482507 PRO2289Q9P1D8 64 aa5.87□□□□□ -1.47
ATG4B-220ENST00000482507 KRTAP9-2Q9BYQ4 174 aa5.86□□□□□ -1.47
ATG4B-220ENST00000482507 KRTAP10-7P60409 375 aaPredicted RBP5.81□□□□□ -1.48
ATG4B-220ENST00000482507 KRTAP10-12P60413 245 aa5.8□□□□□ -1.48
ATG4B-220ENST00000482507 KRTAP12-3P60328 96 aa5.76□□□□□ -1.49
ATG4B-220ENST00000482507 FCGBPQ9Y6R7 5405 aaPredicted RBP5.68□□□□□ -1.5
ATG4B-220ENST00000482507 KRTAP19-6Q3LI70 58 aa5.66□□□□□ -1.5
ATG4B-220ENST00000482507 KMT2DO14686 5537 aa5.65□□□□□ -1.51
ATG4B-220ENST00000482507 CRCT1Q9UGL9 99 aa5.61□□□□□ -1.51
ATG4B-220ENST00000482507 INE1O15225 51 aa5.6□□□□□ -1.51
ATG4B-220ENST00000482507 KRTAP19-5Q3LI72 72 aa5.55□□□□□ -1.52
ATG4B-220ENST00000482507 MACF1Q9UPN3 7388 aaKnown RBP5.52□□□□□ -1.53
ATG4B-220ENST00000482507 SYNE2Q8WXH0 6885 aaKnown RBP5.47□□□□□ -1.53
ATG4B-220ENST00000482507 KRTAP4-8A0A0G2JLE6 195 aa5.46□□□□□ -1.53
ATG4B-220ENST00000482507 KRTAP4-8Q9BYQ9 185 aa5.46□□□□□ -1.53
ATG4B-220ENST00000482507 LCE3CQ5T5A8 94 aa5.43□□□□□ -1.54
ATG4B-220ENST00000482507 KRTAP9-6A0A140TA67 174 aa5.42□□□□□ -1.54
ATG4B-220ENST00000482507 KRTAP9-6A8MVA2 160 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 379 ms