RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 SYNE2Q8WXH0 6885 aaKnown RBP7.16□□□□□ -1.26
COL16A1-212ENST00000482478 H0Y9P7 68 aa7.15□□□□□ -1.26
COL16A1-212ENST00000482478 ATOX1O00244 68 aa7.14□□□□□ -1.27
COL16A1-212ENST00000482478 UQCRQO14949 82 aa7.14□□□□□ -1.27
COL16A1-212ENST00000482478 SMIM20Q8N5G0 67 aa7.13□□□□□ -1.27
COL16A1-212ENST00000482478 OCR1Q9BZK8 76 aa7.12□□□□□ -1.27
COL16A1-212ENST00000482478 Q5VV11 94 aa7.09□□□□□ -1.27
COL16A1-212ENST00000482478 KLKP1Q107X0 134 aa7.08□□□□□ -1.28
COL16A1-212ENST00000482478 TRAV7A0A075B6U4 112 aa7.07□□□□□ -1.28
COL16A1-212ENST00000482478 KRTAP3-3Q9BYR6 98 aa7.07□□□□□ -1.28
COL16A1-212ENST00000482478 SPRR2GQ9BYE4 73 aa7.04□□□□□ -1.28
COL16A1-212ENST00000482478 SERP2Q8N6R1 65 aa7.03□□□□□ -1.28
COL16A1-212ENST00000482478 A6NN06 94 aa7.02□□□□□ -1.29
COL16A1-212ENST00000482478 NDUFC1O43677 76 aa7.01□□□□□ -1.29
COL16A1-212ENST00000482478 MT1BP07438 61 aa7.01□□□□□ -1.29
COL16A1-212ENST00000482478 MP68P56378 58 aa7.01□□□□□ -1.29
COL16A1-212ENST00000482478 LINC00208Q96KT6 92 aa7.01□□□□□ -1.29
COL16A1-212ENST00000482478 A8MUN3 132 aa6.99□□□□□ -1.29
COL16A1-212ENST00000482478 H3BPC8 53 aa6.99□□□□□ -1.29
COL16A1-212ENST00000482478 KRTAP19-8Q3LI54 63 aa6.99□□□□□ -1.29
COL16A1-212ENST00000482478 ANAPC13Q9BS18 74 aa6.98□□□□□ -1.29
COL16A1-212ENST00000482478 CRIPTQ9P021 101 aa6.96□□□□□ -1.3
COL16A1-212ENST00000482478 COX7CP15954 63 aa6.95□□□□□ -1.3
COL16A1-212ENST00000482478 KRTAP6-3Q3LI67 103 aa6.91□□□□□ -1.3
COL16A1-212ENST00000482478 H0YAA0 97 aa6.9□□□□□ -1.3
COL16A1-212ENST00000482478 ADM2Q7Z4H4 148 aa6.89□□□□□ -1.31
COL16A1-212ENST00000482478 C20orf197Q8N268 126 aa6.89□□□□□ -1.31
COL16A1-212ENST00000482478 KRTAP10-5P60370 271 aa6.87□□□□□ -1.31
COL16A1-212ENST00000482478 SNURFQ9Y675 71 aa6.85□□□□□ -1.31
COL16A1-212ENST00000482478 CCDC179H3BU77 68 aa6.8□□□□□ -1.32
COL16A1-212ENST00000482478 DMAC1Q96GE9 116 aa6.79□□□□□ -1.32
COL16A1-212ENST00000482478 NEBP20929 6669 aa6.76□□□□□ -1.33
COL16A1-212ENST00000482478 PCP4P48539 62 aa6.75□□□□□ -1.33
COL16A1-212ENST00000482478 R4GN34 69 aa6.74□□□□□ -1.33
COL16A1-212ENST00000482478 MUC12Q9UKN1 5478 aa6.73□□□□□ -1.33
COL16A1-212ENST00000482478 H7BZZ5 65 aa6.72□□□□□ -1.33
COL16A1-212ENST00000482478 SPANXA2-OT1Q8N9U9 137 aa6.72□□□□□ -1.33
COL16A1-212ENST00000482478 CYSTM1Q9H1C7 97 aa6.71□□□□□ -1.34
COL16A1-212ENST00000482478 M0QZ58 72 aa6.69□□□□□ -1.34
COL16A1-212ENST00000482478 P0C880 135 aa6.69□□□□□ -1.34
COL16A1-212ENST00000482478 PLAC4Q8WY50 150 aa6.68□□□□□ -1.34
COL16A1-212ENST00000482478 PRO2289Q9P1D8 64 aa6.68□□□□□ -1.34
COL16A1-212ENST00000482478 ACYP2P14621 99 aa6.62□□□□□ -1.35
COL16A1-212ENST00000482478 LINC01554Q52M75 96 aa6.62□□□□□ -1.35
COL16A1-212ENST00000482478 KRTAP5-9P26371 169 aa6.59□□□□□ -1.35
COL16A1-212ENST00000482478 TMEM258P61165 79 aa6.59□□□□□ -1.35
COL16A1-212ENST00000482478 MT1XP80297 61 aa6.59□□□□□ -1.35
COL16A1-212ENST00000482478 CHKB-CPT1BH3BT56 60 aa6.58□□□□□ -1.36
COL16A1-212ENST00000482478 ATP5EP56381 51 aaPredicted RBP6.58□□□□□ -1.36
COL16A1-212ENST00000482478 SPTSSBQ8NFR3 76 aa6.58□□□□□ -1.36
COL16A1-212ENST00000482478 KRTAP3-2Q9BYR7 98 aa6.57□□□□□ -1.36
COL16A1-212ENST00000482478 KMT2DO14686 5537 aa6.55□□□□□ -1.36
COL16A1-212ENST00000482478 MDN1Q9NU22 5596 aa6.52□□□□□ -1.36
COL16A1-212ENST00000482478 SPRR2FQ96RM1 72 aa6.48□□□□□ -1.37
COL16A1-212ENST00000482478 KRTAP20-1Q3LI63 56 aa6.47□□□□□ -1.37
COL16A1-212ENST00000482478 COA5Q86WW8 74 aa6.47□□□□□ -1.37
COL16A1-212ENST00000482478 KRTAP8-1Q8IUC2 63 aa6.45□□□□□ -1.38
COL16A1-212ENST00000482478 KRTAP12-2P59991 146 aa6.42□□□□□ -1.38
COL16A1-212ENST00000482478 SERP1Q9Y6X1 66 aa6.4□□□□□ -1.38
COL16A1-212ENST00000482478 SPRR2EP22531 72 aa6.39□□□□□ -1.39
COL16A1-212ENST00000482478 SPRR2BP35325 72 aa6.39□□□□□ -1.39
COL16A1-212ENST00000482478 SPRR2AP35326 72 aa6.39□□□□□ -1.39
COL16A1-212ENST00000482478 RPS28P62857 69 aaKnown RBP6.33□□□□□ -1.4
COL16A1-212ENST00000482478 KRTAP10-7P60409 375 aaPredicted RBP6.3□□□□□ -1.4
COL16A1-212ENST00000482478 KRTAP4-8A0A0G2JLE6 195 aa6.29□□□□□ -1.4
COL16A1-212ENST00000482478 KRTAP4-8Q9BYQ9 185 aa6.29□□□□□ -1.4
COL16A1-212ENST00000482478 KRTAP10-12P60413 245 aa6.24□□□□□ -1.41
COL16A1-212ENST00000482478 KRTAP13-4Q3LI77 160 aa6.24□□□□□ -1.41
COL16A1-212ENST00000482478 KRTAP2-3P0C7H8 128 aa6.23□□□□□ -1.41
COL16A1-212ENST00000482478 LCE1AQ5T7P2 110 aa6.23□□□□□ -1.41
COL16A1-212ENST00000482478 KRTAP2-4Q9BYR9 128 aa6.23□□□□□ -1.41
COL16A1-212ENST00000482478 SMIM26A0A096LP01 95 aa6.22□□□□□ -1.41
COL16A1-212ENST00000482478 CAMK2N1Q7Z7J9 78 aa6.22□□□□□ -1.41
COL16A1-212ENST00000482478 SEC61GP60059 68 aa6.21□□□□□ -1.42
COL16A1-212ENST00000482478 SPRR2DP22532 72 aa6.18□□□□□ -1.42
COL16A1-212ENST00000482478 LINC01558Q9Y6Z2 57 aa6.18□□□□□ -1.42
COL16A1-212ENST00000482478 V9GYY9 64 aa6.17□□□□□ -1.42
COL16A1-212ENST00000482478 A0A0D9SG42 100 aa6.14□□□□□ -1.43
COL16A1-212ENST00000482478 A0A1B0GU69 56 aa6.14□□□□□ -1.43
COL16A1-212ENST00000482478 Q1T7F1 81 aa6.14□□□□□ -1.43
COL16A1-212ENST00000482478 PRR15LQ9BU68 103 aa6.12□□□□□ -1.43
COL16A1-212ENST00000482478 SPATA8Q6RVD6 105 aa6.07□□□□□ -1.44
COL16A1-212ENST00000482478 A0A1B0GU33 70 aa6.04□□□□□ -1.44
COL16A1-212ENST00000482478 SPINT4Q6UDR6 99 aa6.04□□□□□ -1.44
COL16A1-212ENST00000482478 KRTAP2-2Q9BYT5 123 aa6.04□□□□□ -1.44
COL16A1-212ENST00000482478 KRTAP2-1Q9BYU5 128 aa6.04□□□□□ -1.44
COL16A1-212ENST00000482478 PSPHP1O15172 72 aa6□□□□□ -1.45
COL16A1-212ENST00000482478 LCE3BQ5TA77 95 aa5.98□□□□□ -1.45
COL16A1-212ENST00000482478 UQCR11O14957 56 aa5.94□□□□□ -1.46
COL16A1-212ENST00000482478 KRTAP12-1P59990 96 aa5.92□□□□□ -1.46
COL16A1-212ENST00000482478 KRTAP19-7Q3SYF9 63 aa5.87□□□□□ -1.47
COL16A1-212ENST00000482478 MT1EP04732 61 aa5.86□□□□□ -1.47
COL16A1-212ENST00000482478 A8MU10 97 aa5.85□□□□□ -1.47
COL16A1-212ENST00000482478 A6NED7 52 aa5.84□□□□□ -1.47
COL16A1-212ENST00000482478 MIR22HGQ0VDD5 57 aa5.83□□□□□ -1.48
COL16A1-212ENST00000482478 KRTAP19-3Q7Z4W3 81 aa5.81□□□□□ -1.48
COL16A1-212ENST00000482478 LCE5AQ5TCM9 118 aa5.79□□□□□ -1.48
COL16A1-212ENST00000482478 KRTAP19-5Q3LI72 72 aa5.77□□□□□ -1.49
COL16A1-212ENST00000482478 CDC42SE1Q9NRR8 79 aa5.72□□□□□ -1.49
COL16A1-212ENST00000482478 TNP1P09430 55 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms