RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 RBM12B-AS1Q9P1G2 102 aa9.83□□□□□ -0.84
MRPL28-209ENST00000481453 XP32Q5T750 250 aa9.72□□□□□ -0.85
MRPL28-209ENST00000481453 KRTAP3-1Q9BYR8 98 aa9.71□□□□□ -0.85
MRPL28-209ENST00000481453 RPL37P61927 97 aaKnown RBP9.7□□□□□ -0.86
MRPL28-209ENST00000481453 PRAC1Q96KF2 57 aa9.65□□□□□ -0.86
MRPL28-209ENST00000481453 ADM2Q7Z4H4 148 aa9.63□□□□□ -0.87
MRPL28-209ENST00000481453 TPRXLQ17RH7 258 aa9.56□□□□□ -0.88
MRPL28-209ENST00000481453 COX6B2Q6YFQ2 88 aa9.56□□□□□ -0.88
MRPL28-209ENST00000481453 ABCA13Q86UQ4 5058 aa9.56□□□□□ -0.88
MRPL28-209ENST00000481453 H0YAA0 97 aa9.55□□□□□ -0.88
MRPL28-209ENST00000481453 A0A1B0GU33 70 aa9.54□□□□□ -0.88
MRPL28-209ENST00000481453 BIRC6Q9NR09 4857 aa9.53□□□□□ -0.88
MRPL28-209ENST00000481453 HERC2O95714 4834 aa9.51□□□□□ -0.89
MRPL28-209ENST00000481453 H1FX-AS1Q4G0G2 97 aa9.5□□□□□ -0.89
MRPL28-209ENST00000481453 LPAP08519 4548 aa9.42□□□□□ -0.9
MRPL28-209ENST00000481453 LRP2P98164 4655 aa9.42□□□□□ -0.9
MRPL28-209ENST00000481453 J3QL48 77 aa9.41□□□□□ -0.9
MRPL28-209ENST00000481453 CSAG1Q6PB30 78 aa9.38□□□□□ -0.91
MRPL28-209ENST00000481453 LINC01554Q52M75 96 aa9.35□□□□□ -0.91
MRPL28-209ENST00000481453 KRTAP3-3Q9BYR6 98 aa9.3□□□□□ -0.92
MRPL28-209ENST00000481453 K7ERS5 55 aa9.25□□□□□ -0.93
MRPL28-209ENST00000481453 S4R3F8 94 aa9.24□□□□□ -0.93
MRPL28-209ENST00000481453 KRTAP10-6P60371 365 aaPredicted RBP9.23□□□□□ -0.93
MRPL28-209ENST00000481453 SEC61BP60468 96 aaKnown RBP9.18□□□□□ -0.94
MRPL28-209ENST00000481453 KRTAP3-2Q9BYR7 98 aa9.16□□□□□ -0.94
MRPL28-209ENST00000481453 KRTAP25-1Q3LHN0 102 aa9.13□□□□□ -0.95
MRPL28-209ENST00000481453 KRTAP13-4Q3LI77 160 aa9.13□□□□□ -0.95
MRPL28-209ENST00000481453 KRTAP4-1Q9BYQ7 146 aa9.13□□□□□ -0.95
MRPL28-209ENST00000481453 PCLOQ9Y6V0 5065 aa9.1□□□□□ -0.95
MRPL28-209ENST00000481453 A0A0D9SG42 100 aa9.09□□□□□ -0.95
MRPL28-209ENST00000481453 MUC17Q685J3 4493 aa9.08□□□□□ -0.96
MRPL28-209ENST00000481453 P0C880 135 aa9.06□□□□□ -0.96
MRPL28-209ENST00000481453 ROMO1P60602 79 aa9.02□□□□□ -0.97
MRPL28-209ENST00000481453 CRIPTQ9P021 101 aa9.01□□□□□ -0.97
MRPL28-209ENST00000481453 HERC1Q15751 4861 aa8.97□□□□□ -0.97
MRPL28-209ENST00000481453 KRTAP19-2Q3LHN2 52 aa8.94□□□□□ -0.98
MRPL28-209ENST00000481453 HMCN2Q8NDA2 5059 aa8.93□□□□□ -0.98
MRPL28-209ENST00000481453 KRTAP12-2P59991 146 aa8.84□□□□□ -0.99
MRPL28-209ENST00000481453 SPINT4Q6UDR6 99 aa8.8□□□□□ -1
MRPL28-209ENST00000481453 M0QZ58 72 aa8.78□□□□□ -1
MRPL28-209ENST00000481453 KRTAP12-1P59990 96 aa8.78□□□□□ -1
MRPL28-209ENST00000481453 MUC2Q02817 5179 aa8.75□□□□□ -1.01
MRPL28-209ENST00000481453 C10orf95Q9H7T3 257 aa8.69□□□□□ -1.02
MRPL28-209ENST00000481453 FLGP20930 4061 aaPredicted RBP8.61□□□□□ -1.03
MRPL28-209ENST00000481453 H3BS24 57 aa8.6□□□□□ -1.03
MRPL28-209ENST00000481453 LCE2CQ5TA81 110 aa8.59□□□□□ -1.03
MRPL28-209ENST00000481453 R4GN34 69 aa8.59□□□□□ -1.03
MRPL28-209ENST00000481453 LORP23490 312 aaPredicted RBP8.53□□□□□ -1.04
MRPL28-209ENST00000481453 UBR4Q5T4S7 5183 aa8.49□□□□□ -1.05
MRPL28-209ENST00000481453 RNF213Q63HN8 5207 aa8.46□□□□□ -1.05
MRPL28-209ENST00000481453 FAT4Q6V0I7 4981 aa8.39□□□□□ -1.07
MRPL28-209ENST00000481453 MT1HP80294 61 aa8.36□□□□□ -1.07
MRPL28-209ENST00000481453 KRTAP15-1Q3LI76 137 aa8.31□□□□□ -1.08
MRPL28-209ENST00000481453 M0R2T5 61 aa8.23□□□□□ -1.09
MRPL28-209ENST00000481453 CAMK2N1Q7Z7J9 78 aa8.16□□□□□ -1.1
MRPL28-209ENST00000481453 MT2AP02795 61 aa8.11□□□□□ -1.11
MRPL28-209ENST00000481453 KRTAP9-8Q9BYQ0 159 aa8.11□□□□□ -1.11
MRPL28-209ENST00000481453 NDUFAF8A1L188 74 aa8.1□□□□□ -1.11
MRPL28-209ENST00000481453 MT1FP04733 61 aa8.09□□□□□ -1.11
MRPL28-209ENST00000481453 SPRR2GQ9BYE4 73 aa8.07□□□□□ -1.12
MRPL28-209ENST00000481453 KRTAP19-1Q8IUB9 90 aa8.06□□□□□ -1.12
MRPL28-209ENST00000481453 KRTAP10-10P60014 251 aa8.01□□□□□ -1.13
MRPL28-209ENST00000481453 PP632Q6XCG6 107 aa7.99□□□□□ -1.13
MRPL28-209ENST00000481453 PLAC4Q8WY50 150 aa7.99□□□□□ -1.13
MRPL28-209ENST00000481453 TNP1P09430 55 aa7.84□□□□□ -1.15
MRPL28-209ENST00000481453 LCE2AQ5TA79 106 aaPredicted RBP7.82□□□□□ -1.16
MRPL28-209ENST00000481453 KRTAP19-8Q3LI54 63 aa7.81□□□□□ -1.16
MRPL28-209ENST00000481453 KRTAP9-3Q9BYQ3 159 aa7.8□□□□□ -1.16
MRPL28-209ENST00000481453 MT1BP07438 61 aa7.72□□□□□ -1.17
MRPL28-209ENST00000481453 KRTAP23-1A1A580 65 aa7.72□□□□□ -1.17
MRPL28-209ENST00000481453 LUZP6Q538Z0 58 aa7.63□□□□□ -1.19
MRPL28-209ENST00000481453 LCE2BO14633 110 aa7.56□□□□□ -1.2
MRPL28-209ENST00000481453 KRTAP10-5P60370 271 aa7.54□□□□□ -1.2
MRPL28-209ENST00000481453 MT1XP80297 61 aa7.54□□□□□ -1.2
MRPL28-209ENST00000481453 A0A0A0MQY5 61 aa7.42□□□□□ -1.22
MRPL28-209ENST00000481453 SPRR5A0A1B0GTR4 108 aa7.42□□□□□ -1.22
MRPL28-209ENST00000481453 LCE3AQ5TA76 89 aa7.42□□□□□ -1.22
MRPL28-209ENST00000481453 PRO2289Q9P1D8 64 aa7.29□□□□□ -1.24
MRPL28-209ENST00000481453 KRTAP10-7P60409 375 aaPredicted RBP7.27□□□□□ -1.25
MRPL28-209ENST00000481453 USH2AO75445 5202 aa7.24□□□□□ -1.25
MRPL28-209ENST00000481453 KRTAP8-1Q8IUC2 63 aa7.22□□□□□ -1.25
MRPL28-209ENST00000481453 KRTAP10-12P60413 245 aa7.2□□□□□ -1.26
MRPL28-209ENST00000481453 KRTAP12-3P60328 96 aa7.07□□□□□ -1.28
MRPL28-209ENST00000481453 SSPOA2VEC9 5147 aa7□□□□□ -1.29
MRPL28-209ENST00000481453 KRTAP19-6Q3LI70 58 aa6.96□□□□□ -1.29
MRPL28-209ENST00000481453 LCE2DQ5TA82 110 aaPredicted RBP6.93□□□□□ -1.3
MRPL28-209ENST00000481453 KRTAP4-8A0A0G2JLE6 195 aa6.92□□□□□ -1.3
MRPL28-209ENST00000481453 KRTAP4-8Q9BYQ9 185 aa6.92□□□□□ -1.3
MRPL28-209ENST00000481453 KRTAP19-5Q3LI72 72 aa6.87□□□□□ -1.31
MRPL28-209ENST00000481453 KMT2DO14686 5537 aa6.85□□□□□ -1.31
MRPL28-209ENST00000481453 FSIP2Q5CZC0 6907 aa6.77□□□□□ -1.33
MRPL28-209ENST00000481453 KRTAP19-7Q3SYF9 63 aa6.73□□□□□ -1.33
MRPL28-209ENST00000481453 INE1O15225 51 aa6.66□□□□□ -1.34
MRPL28-209ENST00000481453 LCE3CQ5T5A8 94 aa6.65□□□□□ -1.34
MRPL28-209ENST00000481453 FCGBPQ9Y6R7 5405 aaPredicted RBP6.6□□□□□ -1.35
MRPL28-209ENST00000481453 MT1EP04732 61 aa6.57□□□□□ -1.36
MRPL28-209ENST00000481453 KRTAP9-2Q9BYQ4 174 aa6.52□□□□□ -1.37
MRPL28-209ENST00000481453 MT1LQ93083 61 aa6.49□□□□□ -1.37
MRPL28-209ENST00000481453 KRTAP9-6A8MVA2 160 aa6.39□□□□□ -1.39
MRPL28-209ENST00000481453 KRTAP4-7Q9BYR0 210 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 203.2 ms