RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 IGKV2-30P06310 120 aa5.92□□□□□ -1.46
NDC1-202ENST00000480952 A0A1B0GV90 55 aa5.91□□□□□ -1.46
NDC1-202ENST00000480952 SPRR2FQ96RM1 72 aa5.91□□□□□ -1.46
NDC1-202ENST00000480952 KRTAP2-2Q9BYT5 123 aa5.91□□□□□ -1.46
NDC1-202ENST00000480952 KRTAP2-1Q9BYU5 128 aa5.91□□□□□ -1.46
NDC1-202ENST00000480952 CASC2Q6XLA1 102 aa5.89□□□□□ -1.47
NDC1-202ENST00000480952 C7orf65Q6ZTY9 151 aa5.88□□□□□ -1.47
NDC1-202ENST00000480952 ACYP1P07311 99 aa5.87□□□□□ -1.47
NDC1-202ENST00000480952 C4orf26Q17RF5 130 aa5.87□□□□□ -1.47
NDC1-202ENST00000480952 HCG22E2RYF7 251 aa5.85□□□□□ -1.47
NDC1-202ENST00000480952 CXCL6P80162 114 aa5.85□□□□□ -1.47
NDC1-202ENST00000480952 CSAG1Q6PB30 78 aa5.84□□□□□ -1.47
NDC1-202ENST00000480952 FAM240AA0A1B0GVK7 77 aa5.83□□□□□ -1.48
NDC1-202ENST00000480952 KLKP1Q107X0 134 aa5.82□□□□□ -1.48
NDC1-202ENST00000480952 GPR98Q8WXG9 6306 aa5.82□□□□□ -1.48
NDC1-202ENST00000480952 Q5W150 140 aa5.81□□□□□ -1.48
NDC1-202ENST00000480952 S4R3F8 94 aa5.81□□□□□ -1.48
NDC1-202ENST00000480952 LCE3BQ5TA77 95 aa5.79□□□□□ -1.48
NDC1-202ENST00000480952 ATP5EP2Q5VTU8 51 aa5.78□□□□□ -1.48
NDC1-202ENST00000480952 HIST1H4AP62805 103 aaKnown RBP5.76□□□□□ -1.49
NDC1-202ENST00000480952 LCE1AQ5T7P2 110 aa5.76□□□□□ -1.49
NDC1-202ENST00000480952 LCA10Q71F78 164 aa5.76□□□□□ -1.49
NDC1-202ENST00000480952 J3QR89 54 aa5.75□□□□□ -1.49
NDC1-202ENST00000480952 SPRR2DP22532 72 aa5.74□□□□□ -1.49
NDC1-202ENST00000480952 KRTAP3-1Q9BYR8 98 aa5.74□□□□□ -1.49
NDC1-202ENST00000480952 TP53AIP1Q9HCN2 124 aa5.74□□□□□ -1.49
NDC1-202ENST00000480952 LINC00643Q86TS7 51 aa5.73□□□□□ -1.49
NDC1-202ENST00000480952 KRTAP8-1Q8IUC2 63 aa5.73□□□□□ -1.49
NDC1-202ENST00000480952 CRIPTQ9P021 101 aa5.71□□□□□ -1.5
NDC1-202ENST00000480952 C1orf64Q8NEQ6 169 aa5.7□□□□□ -1.5
NDC1-202ENST00000480952 KRTAP9-9Q9BYP9 154 aa5.7□□□□□ -1.5
NDC1-202ENST00000480952 KRTAP9-4Q9BYQ2 154 aa5.7□□□□□ -1.5
NDC1-202ENST00000480952 LCE4AQ5TA78 99 aa5.68□□□□□ -1.5
NDC1-202ENST00000480952 PRO2289Q9P1D8 64 aa5.68□□□□□ -1.5
NDC1-202ENST00000480952 A0A087WVE0 104 aa5.66□□□□□ -1.5
NDC1-202ENST00000480952 TRAV22A0A0B4J277 110 aa5.64□□□□□ -1.51
NDC1-202ENST00000480952 KRTAP23-1A1A580 65 aa5.62□□□□□ -1.51
NDC1-202ENST00000480952 K7ERU9 68 aa5.6□□□□□ -1.51
NDC1-202ENST00000480952 UQCRQO14949 82 aa5.6□□□□□ -1.51
NDC1-202ENST00000480952 MT1XP80297 61 aa5.6□□□□□ -1.51
NDC1-202ENST00000480952 LOC101927531A0A1B0GV80 90 aa5.58□□□□□ -1.52
NDC1-202ENST00000480952 H0Y9P7 68 aa5.58□□□□□ -1.52
NDC1-202ENST00000480952 ATOX1O00244 68 aa5.57□□□□□ -1.52
NDC1-202ENST00000480952 CYP4F30PQ9H0H9 118 aa5.57□□□□□ -1.52
NDC1-202ENST00000480952 DSTQ03001 7570 aaKnown RBP5.55□□□□□ -1.52
NDC1-202ENST00000480952 KRTAP12-2P59991 146 aa5.55□□□□□ -1.52
NDC1-202ENST00000480952 KRTAP4-8A0A0G2JLE6 195 aa5.54□□□□□ -1.52
NDC1-202ENST00000480952 SCGB1A1P11684 91 aa5.54□□□□□ -1.52
NDC1-202ENST00000480952 PLAC4Q8WY50 150 aa5.53□□□□□ -1.52
NDC1-202ENST00000480952 MP68P56378 58 aa5.52□□□□□ -1.53
NDC1-202ENST00000480952 LINC00208Q96KT6 92 aa5.51□□□□□ -1.53
NDC1-202ENST00000480952 OCR1Q9BZK8 76 aa5.51□□□□□ -1.53
NDC1-202ENST00000480952 A8MUN3 132 aa5.5□□□□□ -1.53
NDC1-202ENST00000480952 MT-ATP8P03928 68 aa5.49□□□□□ -1.53
NDC1-202ENST00000480952 LCE1DQ5T752 114 aa5.48□□□□□ -1.53
NDC1-202ENST00000480952 H0YAA0 97 aa5.45□□□□□ -1.54
NDC1-202ENST00000480952 H3BPC8 53 aa5.43□□□□□ -1.54
NDC1-202ENST00000480952 ADM2Q7Z4H4 148 aa5.42□□□□□ -1.54
NDC1-202ENST00000480952 NDUFC1O43677 76 aa5.41□□□□□ -1.54
NDC1-202ENST00000480952 SMIM20Q8N5G0 67 aa5.4□□□□□ -1.54
NDC1-202ENST00000480952 TRAV7A0A075B6U4 112 aa5.37□□□□□ -1.55
NDC1-202ENST00000480952 KRTAP4-9Q9BYQ8 210 aa5.36□□□□□ -1.55
NDC1-202ENST00000480952 KRTAP10-7P60409 375 aaPredicted RBP5.34□□□□□ -1.55
NDC1-202ENST00000480952 LCE5AQ5TCM9 118 aa5.34□□□□□ -1.55
NDC1-202ENST00000480952 KRTAP4-7Q9BYR0 210 aa5.33□□□□□ -1.56
NDC1-202ENST00000480952 R4GN34 69 aa5.32□□□□□ -1.56
NDC1-202ENST00000480952 KRTAP10-12P60413 245 aa5.3□□□□□ -1.56
NDC1-202ENST00000480952 SVIPQ8NHG7 77 aa5.28□□□□□ -1.56
NDC1-202ENST00000480952 DMAC1Q96GE9 116 aa5.27□□□□□ -1.57
NDC1-202ENST00000480952 SERP2Q8N6R1 65 aa5.26□□□□□ -1.57
NDC1-202ENST00000480952 SNURFQ9Y675 71 aa5.26□□□□□ -1.57
NDC1-202ENST00000480952 M0QZ58 72 aa5.25□□□□□ -1.57
NDC1-202ENST00000480952 C20orf197Q8N268 126 aa5.24□□□□□ -1.57
NDC1-202ENST00000480952 LINC01554Q52M75 96 aa5.23□□□□□ -1.57
NDC1-202ENST00000480952 ACYP2P14621 99 aa5.22□□□□□ -1.57
NDC1-202ENST00000480952 P0C880 135 aa5.2□□□□□ -1.58
NDC1-202ENST00000480952 HMCN1Q96RW7 5635 aa5.17□□□□□ -1.58
NDC1-202ENST00000480952 KRTAP4-11Q9BYQ6 195 aa5.16□□□□□ -1.58
NDC1-202ENST00000480952 CHKB-CPT1BH3BT56 60 aa5.15□□□□□ -1.59
NDC1-202ENST00000480952 COX7CP15954 63 aa5.15□□□□□ -1.59
NDC1-202ENST00000480952 SPANXA2-OT1Q8N9U9 137 aa5.14□□□□□ -1.59
NDC1-202ENST00000480952 SPTSSBQ8NFR3 76 aa5.14□□□□□ -1.59
NDC1-202ENST00000480952 AHNAK2Q8IVF2 5795 aa5.13□□□□□ -1.59
NDC1-202ENST00000480952 KRTAP15-1Q3LI76 137 aa5.09□□□□□ -1.59
NDC1-202ENST00000480952 KRTAP4-2Q9BYR5 136 aa5.09□□□□□ -1.59
NDC1-202ENST00000480952 ANAPC13Q9BS18 74 aa5.08□□□□□ -1.6
NDC1-202ENST00000480952 MT4P47944 62 aa5.07□□□□□ -1.6
NDC1-202ENST00000480952 KRTAP19-3Q7Z4W3 81 aa5.05□□□□□ -1.6
NDC1-202ENST00000480952 KRTAP5-10Q6L8G5 202 aa5.02□□□□□ -1.61
NDC1-202ENST00000480952 H7BZZ5 65 aa5.01□□□□□ -1.61
NDC1-202ENST00000480952 KRTAP19-7Q3SYF9 63 aa5□□□□□ -1.61
NDC1-202ENST00000480952 COA5Q86WW8 74 aa5□□□□□ -1.61
NDC1-202ENST00000480952 CYSTM1Q9H1C7 97 aa5□□□□□ -1.61
NDC1-202ENST00000480952 MT1EP04732 61 aa4.99□□□□□ -1.61
NDC1-202ENST00000480952 CCDC179H3BU77 68 aa4.94□□□□□ -1.62
NDC1-202ENST00000480952 PCP4P48539 62 aa4.91□□□□□ -1.62
NDC1-202ENST00000480952 SEC61GP60059 68 aa4.91□□□□□ -1.62
NDC1-202ENST00000480952 MT1GP13640 62 aa4.89□□□□□ -1.63
NDC1-202ENST00000480952 KRTAP5-7Q6L8G8 165 aa4.89□□□□□ -1.63
NDC1-202ENST00000480952 SERP1Q9Y6X1 66 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 582.5 ms