RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 MT1FP04733 61 aa2.4□□□□□ -2.03
HDAC6-223ENST00000480525 SERP2Q8N6R1 65 aa2.4□□□□□ -2.03
HDAC6-223ENST00000480525 SPANXA2-OT1Q8N9U9 137 aa2.4□□□□□ -2.03
HDAC6-223ENST00000480525 KRTAP9-3Q9BYQ3 159 aa2.4□□□□□ -2.03
HDAC6-223ENST00000480525 CRIPTQ9P021 101 aa2.4□□□□□ -2.03
HDAC6-223ENST00000480525 RPS28P62857 69 aaKnown RBP2.39□□□□□ -2.03
HDAC6-223ENST00000480525 KLKP1Q107X0 134 aa2.39□□□□□ -2.03
HDAC6-223ENST00000480525 LCA10Q71F78 164 aa2.39□□□□□ -2.03
HDAC6-223ENST00000480525 KRTAP3-3Q9BYR6 98 aa2.39□□□□□ -2.03
HDAC6-223ENST00000480525 FSIP2Q5CZC0 6907 aa2.38□□□□□ -2.03
HDAC6-223ENST00000480525 NDUFC1O43677 76 aa2.38□□□□□ -2.03
HDAC6-223ENST00000480525 KRTAP10-10P60014 251 aa2.37□□□□□ -2.03
HDAC6-223ENST00000480525 KRTAP9-6A0A140TA67 174 aa2.36□□□□□ -2.03
HDAC6-223ENST00000480525 SPRR2GQ9BYE4 73 aa2.36□□□□□ -2.03
HDAC6-223ENST00000480525 CRCT1Q9UGL9 99 aa2.36□□□□□ -2.03
HDAC6-223ENST00000480525 USH2AO75445 5202 aa2.35□□□□□ -2.03
HDAC6-223ENST00000480525 ACYP2P14621 99 aa2.35□□□□□ -2.03
HDAC6-223ENST00000480525 COX7CP15954 63 aa2.34□□□□□ -2.03
HDAC6-223ENST00000480525 C20orf197Q8N268 126 aa2.34□□□□□ -2.03
HDAC6-223ENST00000480525 SPTSSBQ8NFR3 76 aa2.34□□□□□ -2.03
HDAC6-223ENST00000480525 LCE2BO14633 110 aa2.33□□□□□ -2.04
HDAC6-223ENST00000480525 TMEM258P61165 79 aa2.33□□□□□ -2.04
HDAC6-223ENST00000480525 KRTAP19-8Q3LI54 63 aa2.32□□□□□ -2.04
HDAC6-223ENST00000480525 KRTAP19-1Q8IUB9 90 aa2.32□□□□□ -2.04
HDAC6-223ENST00000480525 KRTAP19-6Q3LI70 58 aa2.31□□□□□ -2.04
HDAC6-223ENST00000480525 PRO0628Q9UI54 55 aa2.31□□□□□ -2.04
HDAC6-223ENST00000480525 SSPOA2VEC9 5147 aa2.31□□□□□ -2.04
HDAC6-223ENST00000480525 H7BZZ5 65 aa2.29□□□□□ -2.04
HDAC6-223ENST00000480525 SEC61GP60059 68 aa2.29□□□□□ -2.04
HDAC6-223ENST00000480525 CYSTM1Q9H1C7 97 aa2.29□□□□□ -2.04
HDAC6-223ENST00000480525 ATP5EP56381 51 aaPredicted RBP2.28□□□□□ -2.04
HDAC6-223ENST00000480525 SNURFQ9Y675 71 aa2.28□□□□□ -2.04
HDAC6-223ENST00000480525 SERP1Q9Y6X1 66 aa2.27□□□□□ -2.05
HDAC6-223ENST00000480525 V9GYY9 64 aa2.27□□□□□ -2.05
HDAC6-223ENST00000480525 FCGBPQ9Y6R7 5405 aaPredicted RBP2.27□□□□□ -2.05
HDAC6-223ENST00000480525 Q5VV11 94 aa2.26□□□□□ -2.05
HDAC6-223ENST00000480525 SMIM26A0A096LP01 95 aa2.25□□□□□ -2.05
HDAC6-223ENST00000480525 CHKB-CPT1BH3BT56 60 aa2.25□□□□□ -2.05
HDAC6-223ENST00000480525 M0QZ58 72 aa2.25□□□□□ -2.05
HDAC6-223ENST00000480525 MT1BP07438 61 aa2.25□□□□□ -2.05
HDAC6-223ENST00000480525 ADM2Q7Z4H4 148 aa2.25□□□□□ -2.05
HDAC6-223ENST00000480525 KRTAP3-2Q9BYR7 98 aa2.25□□□□□ -2.05
HDAC6-223ENST00000480525 A6NN06 94 aa2.24□□□□□ -2.05
HDAC6-223ENST00000480525 R4GN34 69 aa2.24□□□□□ -2.05
HDAC6-223ENST00000480525 COA5Q86WW8 74 aa2.23□□□□□ -2.05
HDAC6-223ENST00000480525 P0C880 135 aa2.21□□□□□ -2.06
HDAC6-223ENST00000480525 KRTAP10-5P60370 271 aa2.21□□□□□ -2.06
HDAC6-223ENST00000480525 MACF1Q9UPN3 7388 aaKnown RBP2.2□□□□□ -2.06
HDAC6-223ENST00000480525 BRK1Q8WUW1 75 aa2.2□□□□□ -2.06
HDAC6-223ENST00000480525 PRO2289Q9P1D8 64 aa2.2□□□□□ -2.06
HDAC6-223ENST00000480525 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.19□□□□□ -2.06
HDAC6-223ENST00000480525 PMAIP1Q13794 54 aa2.19□□□□□ -2.06
HDAC6-223ENST00000480525 PLAC4Q8WY50 150 aa2.17□□□□□ -2.06
HDAC6-223ENST00000480525 KRTAP12-2P59991 146 aa2.16□□□□□ -2.06
HDAC6-223ENST00000480525 MT1XP80297 61 aa2.14□□□□□ -2.07
HDAC6-223ENST00000480525 SYNE2Q8WXH0 6885 aaKnown RBP2.13□□□□□ -2.07
HDAC6-223ENST00000480525 KRTAP9-7A8MTY7 169 aa2.13□□□□□ -2.07
HDAC6-223ENST00000480525 Q1T7F1 81 aa2.13□□□□□ -2.07
HDAC6-223ENST00000480525 KRTAP6-3Q3LI67 103 aa2.13□□□□□ -2.07
HDAC6-223ENST00000480525 PRR15LQ9BU68 103 aa2.13□□□□□ -2.07
HDAC6-223ENST00000480525 LINC01558Q9Y6Z2 57 aa2.13□□□□□ -2.07
HDAC6-223ENST00000480525 A0A1B0GU33 70 aa2.12□□□□□ -2.07
HDAC6-223ENST00000480525 A0A1B0GU69 56 aa2.12□□□□□ -2.07
HDAC6-223ENST00000480525 KRTAP5-9P26371 169 aa2.11□□□□□ -2.07
HDAC6-223ENST00000480525 KRTAP13-4Q3LI77 160 aa2.1□□□□□ -2.07
HDAC6-223ENST00000480525 KTN1-AS1Q86SY8 53 aa2.1□□□□□ -2.07
HDAC6-223ENST00000480525 LINC01554Q52M75 96 aa2.08□□□□□ -2.08
HDAC6-223ENST00000480525 KRTAP10-12P60413 245 aa2.07□□□□□ -2.08
HDAC6-223ENST00000480525 UQCR11O14957 56 aa2.06□□□□□ -2.08
HDAC6-223ENST00000480525 PSPHP1O15172 72 aa2.06□□□□□ -2.08
HDAC6-223ENST00000480525 KRTAP12-1P59990 96 aa2.05□□□□□ -2.08
HDAC6-223ENST00000480525 A8MU10 97 aa2.04□□□□□ -2.08
HDAC6-223ENST00000480525 SPATA8Q6RVD6 105 aa2.04□□□□□ -2.08
HDAC6-223ENST00000480525 CAMK2N1Q7Z7J9 78 aa2.04□□□□□ -2.08
HDAC6-223ENST00000480525 KMT2DO14686 5537 aa2.03□□□□□ -2.08
HDAC6-223ENST00000480525 NEBP20929 6669 aa2.03□□□□□ -2.08
HDAC6-223ENST00000480525 MUC12Q9UKN1 5478 aa2.02□□□□□ -2.09
HDAC6-223ENST00000480525 H3BS24 57 aa2.02□□□□□ -2.09
HDAC6-223ENST00000480525 CDC42SE1Q9NRR8 79 aa2.02□□□□□ -2.09
HDAC6-223ENST00000480525 KRTAP8-1Q8IUC2 63 aa2□□□□□ -2.09
HDAC6-223ENST00000480525 A0A0D9SG42 100 aa1.99□□□□□ -2.09
HDAC6-223ENST00000480525 A6NED7 52 aa1.99□□□□□ -2.09
HDAC6-223ENST00000480525 KRTAP10-7P60409 375 aaPredicted RBP1.99□□□□□ -2.09
HDAC6-223ENST00000480525 MDN1Q9NU22 5596 aa1.99□□□□□ -2.09
HDAC6-223ENST00000480525 MIR22HGQ0VDD5 57 aa1.98□□□□□ -2.09
HDAC6-223ENST00000480525 SPINT4Q6UDR6 99 aa1.98□□□□□ -2.09
HDAC6-223ENST00000480525 K7ERS5 55 aa1.97□□□□□ -2.09
HDAC6-223ENST00000480525 LCE1AQ5T7P2 110 aa1.97□□□□□ -2.09
HDAC6-223ENST00000480525 KRTAP23-1A1A580 65 aa1.95□□□□□ -2.1
HDAC6-223ENST00000480525 TNP1P09430 55 aa1.95□□□□□ -2.1
HDAC6-223ENST00000480525 SPRR2FQ96RM1 72 aa1.95□□□□□ -2.1
HDAC6-223ENST00000480525 KRTAP4-8A0A0G2JLE6 195 aa1.94□□□□□ -2.1
HDAC6-223ENST00000480525 PRAC1Q96KF2 57 aa1.94□□□□□ -2.1
HDAC6-223ENST00000480525 KRTAP4-8Q9BYQ9 185 aa1.94□□□□□ -2.1
HDAC6-223ENST00000480525 C10orf95Q9H7T3 257 aa1.94□□□□□ -2.1
HDAC6-223ENST00000480525 KRTAP25-1Q3LHN0 102 aa1.93□□□□□ -2.1
HDAC6-223ENST00000480525 KRTAP19-4Q3LI73 84 aa1.92□□□□□ -2.1
HDAC6-223ENST00000480525 KRTAP19-7Q3SYF9 63 aa1.92□□□□□ -2.1
HDAC6-223ENST00000480525 SPRR2EP22531 72 aa1.9□□□□□ -2.11
HDAC6-223ENST00000480525 SPRR2BP35325 72 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms