RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 KRTAP13-2Q52LG2 175 aa5.64□□□□□ -1.51
COMMD4-203ENST00000480484 MYCBP2O75592 4640 aa5.61□□□□□ -1.51
COMMD4-203ENST00000480484 CRIPTQ9P021 101 aa5.61□□□□□ -1.51
COMMD4-203ENST00000480484 H0YAA0 97 aa5.6□□□□□ -1.51
COMMD4-203ENST00000480484 Q6ZSA8 131 aa5.6□□□□□ -1.51
COMMD4-203ENST00000480484 KRTAP25-1Q3LHN0 102 aa5.59□□□□□ -1.51
COMMD4-203ENST00000480484 DMBT1Q9UGM3 2413 aaPredicted RBP5.59□□□□□ -1.51
COMMD4-203ENST00000480484 LINC00304Q8N9R0 145 aa5.59□□□□□ -1.51
COMMD4-203ENST00000480484 RYR3Q15413 4870 aa5.57□□□□□ -1.52
COMMD4-203ENST00000480484 A0A1B0GVY2 172 aa5.56□□□□□ -1.52
COMMD4-203ENST00000480484 KRTAP1-4P0C5Y4 121 aa5.55□□□□□ -1.52
COMMD4-203ENST00000480484 A0A1B0GU33 70 aa5.55□□□□□ -1.52
COMMD4-203ENST00000480484 KMT2CQ8NEZ4 4911 aaKnown RBP5.53□□□□□ -1.52
COMMD4-203ENST00000480484 LRP1Q07954 4544 aaKnown RBP5.53□□□□□ -1.52
COMMD4-203ENST00000480484 XP32Q5T750 250 aa5.51□□□□□ -1.53
COMMD4-203ENST00000480484 HSPG2P98160 4391 aa5.5□□□□□ -1.53
COMMD4-203ENST00000480484 SMR3BP02814 79 aaPredicted RBP5.49□□□□□ -1.53
COMMD4-203ENST00000480484 H1FX-AS1Q4G0G2 97 aa5.49□□□□□ -1.53
COMMD4-203ENST00000480484 FAT3Q8TDW7 4589 aa5.47□□□□□ -1.53
COMMD4-203ENST00000480484 C9orf92A6NGG3 77 aa5.47□□□□□ -1.53
COMMD4-203ENST00000480484 APOBP04114 4563 aaKnown RBP5.47□□□□□ -1.53
COMMD4-203ENST00000480484 LPAP08519 4548 aa5.47□□□□□ -1.53
COMMD4-203ENST00000480484 BIRC6Q9NR09 4857 aa5.42□□□□□ -1.54
COMMD4-203ENST00000480484 COX6B2Q6YFQ2 88 aa5.39□□□□□ -1.55
COMMD4-203ENST00000480484 SPINT4Q6UDR6 99 aa5.38□□□□□ -1.55
COMMD4-203ENST00000480484 KRTAP4-8Q9BYQ9 185 aa5.37□□□□□ -1.55
COMMD4-203ENST00000480484 HERC2O95714 4834 aa5.37□□□□□ -1.55
COMMD4-203ENST00000480484 A0A0D9SG42 100 aa5.36□□□□□ -1.55
COMMD4-203ENST00000480484 KRTAP10-4P60372 401 aaPredicted RBP5.35□□□□□ -1.55
COMMD4-203ENST00000480484 KRTAP15-1Q3LI76 137 aa5.35□□□□□ -1.55
COMMD4-203ENST00000480484 R4GN34 69 aa5.34□□□□□ -1.56
COMMD4-203ENST00000480484 RYR1P21817 5038 aa5.3□□□□□ -1.56
COMMD4-203ENST00000480484 RPL37P61927 97 aaKnown RBP5.3□□□□□ -1.56
COMMD4-203ENST00000480484 C10orf95Q9H7T3 257 aa5.3□□□□□ -1.56
COMMD4-203ENST00000480484 TPRXLQ17RH7 258 aa5.28□□□□□ -1.56
COMMD4-203ENST00000480484 EPPK1P58107 5090 aaKnown RBP5.27□□□□□ -1.57
COMMD4-203ENST00000480484 KRTAP13-4Q3LI77 160 aa5.25□□□□□ -1.57
COMMD4-203ENST00000480484 RPS29P62273 56 aaKnown RBP5.25□□□□□ -1.57
COMMD4-203ENST00000480484 TNXBP22105 4242 aa5.24□□□□□ -1.57
COMMD4-203ENST00000480484 LRP2P98164 4655 aa5.24□□□□□ -1.57
COMMD4-203ENST00000480484 KRTAP9-2Q9BYQ4 174 aa5.21□□□□□ -1.57
COMMD4-203ENST00000480484 KRTAP10-6P60371 365 aaPredicted RBP5.21□□□□□ -1.58
COMMD4-203ENST00000480484 KRTAP4-12Q9BQ66 201 aa5.2□□□□□ -1.58
COMMD4-203ENST00000480484 KRTAP17-1Q9BYP8 105 aa5.19□□□□□ -1.58
COMMD4-203ENST00000480484 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.18□□□□□ -1.58
COMMD4-203ENST00000480484 KRTAP10-8P60410 259 aa5.18□□□□□ -1.58
COMMD4-203ENST00000480484 ABCA13Q86UQ4 5058 aa5.17□□□□□ -1.58
COMMD4-203ENST00000480484 KRTAP9-6A0A140TA67 174 aa5.16□□□□□ -1.58
COMMD4-203ENST00000480484 KIAA1109Q2LD37 5005 aa5.16□□□□□ -1.58
COMMD4-203ENST00000480484 Q5VSD8 79 aa5.14□□□□□ -1.59
COMMD4-203ENST00000480484 PRO2289Q9P1D8 64 aa5.13□□□□□ -1.59
COMMD4-203ENST00000480484 S4R3F8 94 aa5.13□□□□□ -1.59
COMMD4-203ENST00000480484 KRTAP12-2P59991 146 aa5.11□□□□□ -1.59
COMMD4-203ENST00000480484 KRTAP19-1Q8IUB9 90 aa5.1□□□□□ -1.59
COMMD4-203ENST00000480484 MUC17Q685J3 4493 aa5.07□□□□□ -1.6
COMMD4-203ENST00000480484 MUC2Q02817 5179 aa5.06□□□□□ -1.6
COMMD4-203ENST00000480484 LCE3BQ5TA77 95 aa5.04□□□□□ -1.6
COMMD4-203ENST00000480484 KRTAP12-1P59990 96 aa5.02□□□□□ -1.61
COMMD4-203ENST00000480484 MT1HL1P0DM35 61 aa5□□□□□ -1.61
COMMD4-203ENST00000480484 KRTAP9-9Q9BYP9 154 aa4.96□□□□□ -1.62
COMMD4-203ENST00000480484 KRTAP9-4Q9BYQ2 154 aa4.96□□□□□ -1.62
COMMD4-203ENST00000480484 PCLOQ9Y6V0 5065 aa4.95□□□□□ -1.62
COMMD4-203ENST00000480484 KRTAP19-4Q3LI73 84 aa4.93□□□□□ -1.62
COMMD4-203ENST00000480484 KRTAP4-5Q9BYR2 181 aa4.92□□□□□ -1.62
COMMD4-203ENST00000480484 KRTAP4-8A0A0G2JLE6 195 aa4.89□□□□□ -1.63
COMMD4-203ENST00000480484 M0QZ58 72 aa4.88□□□□□ -1.63
COMMD4-203ENST00000480484 PLAC4Q8WY50 150 aa4.84□□□□□ -1.63
COMMD4-203ENST00000480484 LCE5AQ5TCM9 118 aa4.8□□□□□ -1.64
COMMD4-203ENST00000480484 LCE1DQ5T752 114 aa4.78□□□□□ -1.64
COMMD4-203ENST00000480484 FAT4Q6V0I7 4981 aa4.78□□□□□ -1.64
COMMD4-203ENST00000480484 HMCN2Q8NDA2 5059 aa4.74□□□□□ -1.65
COMMD4-203ENST00000480484 KRTAP4-7Q9BYR0 210 aa4.73□□□□□ -1.65
COMMD4-203ENST00000480484 KRTAP4-1Q9BYQ7 146 aa4.69□□□□□ -1.66
COMMD4-203ENST00000480484 HERC1Q15751 4861 aa4.66□□□□□ -1.66
COMMD4-203ENST00000480484 KRTAP4-9Q9BYQ8 210 aa4.66□□□□□ -1.66
COMMD4-203ENST00000480484 RNF213Q63HN8 5207 aa4.62□□□□□ -1.67
COMMD4-203ENST00000480484 LCE4AQ5TA78 99 aa4.61□□□□□ -1.67
COMMD4-203ENST00000480484 KRTAP9-7A8MTY7 169 aa4.6□□□□□ -1.67
COMMD4-203ENST00000480484 PP632Q6XCG6 107 aa4.57□□□□□ -1.68
COMMD4-203ENST00000480484 KRTAP19-2Q3LHN2 52 aa4.55□□□□□ -1.68
COMMD4-203ENST00000480484 INE1O15225 51 aa4.54□□□□□ -1.68
COMMD4-203ENST00000480484 KRTAP4-2Q9BYR5 136 aa4.5□□□□□ -1.69
COMMD4-203ENST00000480484 FLGP20930 4061 aaPredicted RBP4.5□□□□□ -1.69
COMMD4-203ENST00000480484 KRTAP9-3Q9BYQ3 159 aa4.5□□□□□ -1.69
COMMD4-203ENST00000480484 KRTAP4-11Q9BYQ6 195 aa4.48□□□□□ -1.69
COMMD4-203ENST00000480484 UBR4Q5T4S7 5183 aa4.44□□□□□ -1.7
COMMD4-203ENST00000480484 TNP1P09430 55 aa4.42□□□□□ -1.7
COMMD4-203ENST00000480484 LCE1FQ5T754 118 aa4.4□□□□□ -1.71
COMMD4-203ENST00000480484 KRTAP2-2Q9BYT5 123 aa4.38□□□□□ -1.71
COMMD4-203ENST00000480484 SPRR5A0A1B0GTR4 108 aa4.32□□□□□ -1.72
COMMD4-203ENST00000480484 USH2AO75445 5202 aa4.26□□□□□ -1.73
COMMD4-203ENST00000480484 KMT2DO14686 5537 aa4.26□□□□□ -1.73
COMMD4-203ENST00000480484 M0R2T5 61 aa4.2□□□□□ -1.74
COMMD4-203ENST00000480484 MT1HP80294 61 aa4.19□□□□□ -1.74
COMMD4-203ENST00000480484 LCE3AQ5TA76 89 aa4.17□□□□□ -1.74
COMMD4-203ENST00000480484 MT1FP04733 61 aa4.13□□□□□ -1.75
COMMD4-203ENST00000480484 LCE3CQ5T5A8 94 aa4.12□□□□□ -1.75
COMMD4-203ENST00000480484 SPRR2GQ9BYE4 73 aa4.12□□□□□ -1.75
COMMD4-203ENST00000480484 MT2AP02795 61 aa4.11□□□□□ -1.75
COMMD4-203ENST00000480484 LCE1AQ5T7P2 110 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms