RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 SSBP3-AS1Q7Z2R9 100 aa7.37□□□□□ -1.23
CNKSR3-204ENST00000479339 FAT3Q8TDW7 4589 aa7.36□□□□□ -1.23
CNKSR3-204ENST00000479339 ANAPC11Q9NYG5 84 aa7.35□□□□□ -1.23
CNKSR3-204ENST00000479339 PSORS1C2Q9UIG4 136 aa7.35□□□□□ -1.23
CNKSR3-204ENST00000479339 KRTAP16-1A8MUX0 517 aa7.35□□□□□ -1.23
CNKSR3-204ENST00000479339 K7ERS5 55 aa7.35□□□□□ -1.23
CNKSR3-204ENST00000479339 LRP1Q07954 4544 aaKnown RBP7.33□□□□□ -1.24
CNKSR3-204ENST00000479339 A0A1B0GU33 70 aa7.32□□□□□ -1.24
CNKSR3-204ENST00000479339 SPINK1P00995 79 aa7.32□□□□□ -1.24
CNKSR3-204ENST00000479339 H1FX-AS1Q4G0G2 97 aa7.29□□□□□ -1.24
CNKSR3-204ENST00000479339 KRTAP3-3Q9BYR6 98 aa7.29□□□□□ -1.24
CNKSR3-204ENST00000479339 KRTAP3-2Q9BYR7 98 aa7.29□□□□□ -1.24
CNKSR3-204ENST00000479339 MT1HL1P0DM35 61 aa7.28□□□□□ -1.24
CNKSR3-204ENST00000479339 A0A0A0MQY5 61 aa7.22□□□□□ -1.25
CNKSR3-204ENST00000479339 TYMSOSQ8TAI1 123 aa7.22□□□□□ -1.25
CNKSR3-204ENST00000479339 SPINT4Q6UDR6 99 aa7.19□□□□□ -1.26
CNKSR3-204ENST00000479339 KRTAP10-8P60410 259 aa7.17□□□□□ -1.26
CNKSR3-204ENST00000479339 HMCN2Q8NDA2 5059 aa7.17□□□□□ -1.26
CNKSR3-204ENST00000479339 TNXBP22105 4242 aa7.16□□□□□ -1.26
CNKSR3-204ENST00000479339 C20orf166-AS1Q96NR2 134 aa7.15□□□□□ -1.26
CNKSR3-204ENST00000479339 CRIPTQ9P021 101 aa7.15□□□□□ -1.26
CNKSR3-204ENST00000479339 NDUFAF8A1L188 74 aa7.1□□□□□ -1.27
CNKSR3-204ENST00000479339 KRTAP15-1Q3LI76 137 aa7.1□□□□□ -1.27
CNKSR3-204ENST00000479339 COX6B2Q6YFQ2 88 aa7.06□□□□□ -1.28
CNKSR3-204ENST00000479339 KRTAP13-2Q52LG2 175 aa7.06□□□□□ -1.28
CNKSR3-204ENST00000479339 RPL37P61927 97 aaKnown RBP7.05□□□□□ -1.28
CNKSR3-204ENST00000479339 KRTAP1-4P0C5Y4 121 aa7.04□□□□□ -1.28
CNKSR3-204ENST00000479339 TPRXLQ17RH7 258 aa7.03□□□□□ -1.28
CNKSR3-204ENST00000479339 KRTAP3-1Q9BYR8 98 aa6.98□□□□□ -1.29
CNKSR3-204ENST00000479339 UBR4Q5T4S7 5183 aa6.95□□□□□ -1.3
CNKSR3-204ENST00000479339 LRP2P98164 4655 aa6.94□□□□□ -1.3
CNKSR3-204ENST00000479339 RPS29P62273 56 aaKnown RBP6.89□□□□□ -1.31
CNKSR3-204ENST00000479339 C10orf95Q9H7T3 257 aa6.86□□□□□ -1.31
CNKSR3-204ENST00000479339 KRTAP10-6P60371 365 aaPredicted RBP6.81□□□□□ -1.32
CNKSR3-204ENST00000479339 LPAP08519 4548 aa6.81□□□□□ -1.32
CNKSR3-204ENST00000479339 KRTAP13-4Q3LI77 160 aa6.79□□□□□ -1.32
CNKSR3-204ENST00000479339 A0A0D9SG42 100 aa6.78□□□□□ -1.32
CNKSR3-204ENST00000479339 RNF213Q63HN8 5207 aa6.77□□□□□ -1.33
CNKSR3-204ENST00000479339 LUZP6Q538Z0 58 aa6.76□□□□□ -1.33
CNKSR3-204ENST00000479339 S4R3F8 94 aa6.76□□□□□ -1.33
CNKSR3-204ENST00000479339 XP32Q5T750 250 aa6.7□□□□□ -1.34
CNKSR3-204ENST00000479339 C9orf92A6NGG3 77 aa6.68□□□□□ -1.34
CNKSR3-204ENST00000479339 KRTAP12-2P59991 146 aa6.64□□□□□ -1.35
CNKSR3-204ENST00000479339 KRTAP12-1P59990 96 aa6.6□□□□□ -1.35
CNKSR3-204ENST00000479339 MUC17Q685J3 4493 aa6.6□□□□□ -1.35
CNKSR3-204ENST00000479339 SEC61BP60468 96 aaKnown RBP6.57□□□□□ -1.36
CNKSR3-204ENST00000479339 MUC2Q02817 5179 aa6.52□□□□□ -1.37
CNKSR3-204ENST00000479339 PLAC4Q8WY50 150 aa6.5□□□□□ -1.37
CNKSR3-204ENST00000479339 M0QZ58 72 aa6.49□□□□□ -1.37
CNKSR3-204ENST00000479339 LCE2AQ5TA79 106 aaPredicted RBP6.48□□□□□ -1.37
CNKSR3-204ENST00000479339 FAT4Q6V0I7 4981 aa6.43□□□□□ -1.38
CNKSR3-204ENST00000479339 KRTAP4-1Q9BYQ7 146 aa6.42□□□□□ -1.38
CNKSR3-204ENST00000479339 KRTAP9-2Q9BYQ4 174 aa6.32□□□□□ -1.4
CNKSR3-204ENST00000479339 PP632Q6XCG6 107 aa6.28□□□□□ -1.4
CNKSR3-204ENST00000479339 LCE2CQ5TA81 110 aa6.27□□□□□ -1.41
CNKSR3-204ENST00000479339 KRTAP19-2Q3LHN2 52 aa6.26□□□□□ -1.41
CNKSR3-204ENST00000479339 LCE2BO14633 110 aa6.25□□□□□ -1.41
CNKSR3-204ENST00000479339 MT1HP80294 61 aa6.18□□□□□ -1.42
CNKSR3-204ENST00000479339 CAMK2N1Q7Z7J9 78 aa6.15□□□□□ -1.43
CNKSR3-204ENST00000479339 R4GN34 69 aa6.12□□□□□ -1.43
CNKSR3-204ENST00000479339 KRTAP9-6A0A140TA67 174 aa6.11□□□□□ -1.43
CNKSR3-204ENST00000479339 KRTAP23-1A1A580 65 aa6.11□□□□□ -1.43
CNKSR3-204ENST00000479339 LORP23490 312 aaPredicted RBP6.08□□□□□ -1.44
CNKSR3-204ENST00000479339 M0R2T5 61 aa6.04□□□□□ -1.44
CNKSR3-204ENST00000479339 FLGP20930 4061 aaPredicted RBP6.03□□□□□ -1.44
CNKSR3-204ENST00000479339 SPRR5A0A1B0GTR4 108 aa6.03□□□□□ -1.44
CNKSR3-204ENST00000479339 PRO2289Q9P1D8 64 aa6.01□□□□□ -1.45
CNKSR3-204ENST00000479339 CRCT1Q9UGL9 99 aa5.98□□□□□ -1.45
CNKSR3-204ENST00000479339 INE1O15225 51 aa5.86□□□□□ -1.47
CNKSR3-204ENST00000479339 KRTAP9-8Q9BYQ0 159 aa5.86□□□□□ -1.47
CNKSR3-204ENST00000479339 FSIP2Q5CZC0 6907 aa5.83□□□□□ -1.48
CNKSR3-204ENST00000479339 TNP1P09430 55 aa5.79□□□□□ -1.48
CNKSR3-204ENST00000479339 MT2AP02795 61 aa5.77□□□□□ -1.49
CNKSR3-204ENST00000479339 MT1FP04733 61 aa5.72□□□□□ -1.49
CNKSR3-204ENST00000479339 KRTAP10-10P60014 251 aa5.68□□□□□ -1.5
CNKSR3-204ENST00000479339 KRTAP9-3Q9BYQ3 159 aa5.68□□□□□ -1.5
CNKSR3-204ENST00000479339 USH2AO75445 5202 aa5.63□□□□□ -1.51
CNKSR3-204ENST00000479339 SSPOA2VEC9 5147 aa5.57□□□□□ -1.52
CNKSR3-204ENST00000479339 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.57□□□□□ -1.52
CNKSR3-204ENST00000479339 KRTAP19-1Q8IUB9 90 aa5.56□□□□□ -1.52
CNKSR3-204ENST00000479339 KRTAP9-7A8MTY7 169 aa5.49□□□□□ -1.53
CNKSR3-204ENST00000479339 FCGBPQ9Y6R7 5405 aaPredicted RBP5.48□□□□□ -1.53
CNKSR3-204ENST00000479339 KRTAP19-6Q3LI70 58 aa5.47□□□□□ -1.53
CNKSR3-204ENST00000479339 LCE3AQ5TA76 89 aa5.32□□□□□ -1.56
CNKSR3-204ENST00000479339 SPRR2GQ9BYE4 73 aa5.28□□□□□ -1.56
CNKSR3-204ENST00000479339 KRTAP8-1Q8IUC2 63 aa5.27□□□□□ -1.57
CNKSR3-204ENST00000479339 MACF1Q9UPN3 7388 aaKnown RBP5.27□□□□□ -1.57
CNKSR3-204ENST00000479339 KRTAP19-8Q3LI54 63 aa5.26□□□□□ -1.57
CNKSR3-204ENST00000479339 MT1BP07438 61 aa5.25□□□□□ -1.57
CNKSR3-204ENST00000479339 KRTAP6-3Q3LI67 103 aa5.21□□□□□ -1.57
CNKSR3-204ENST00000479339 SYNE2Q8WXH0 6885 aaKnown RBP5.19□□□□□ -1.58
CNKSR3-204ENST00000479339 KRTAP10-5P60370 271 aa5.14□□□□□ -1.59
CNKSR3-204ENST00000479339 KRTAP10-12P60413 245 aa5.11□□□□□ -1.59
CNKSR3-204ENST00000479339 KRTAP12-3P60328 96 aa5.07□□□□□ -1.6
CNKSR3-204ENST00000479339 KRTAP5-9P26371 169 aa4.96□□□□□ -1.62
CNKSR3-204ENST00000479339 NEBP20929 6669 aa4.96□□□□□ -1.62
CNKSR3-204ENST00000479339 MT1XP80297 61 aa4.92□□□□□ -1.62
CNKSR3-204ENST00000479339 MUC12Q9UKN1 5478 aa4.87□□□□□ -1.63
CNKSR3-204ENST00000479339 KRTAP20-1Q3LI63 56 aa4.82□□□□□ -1.64
CNKSR3-204ENST00000479339 LCE3CQ5T5A8 94 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms