RNA–Protein interactions for RNA: ENST00000479320.5

HLA-A-206, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,334 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-206ENST00000479320 LINC00472Q9H8W2 130 aa9.28□□□□□ -0.92
HLA-A-206ENST00000479320 C20orf166-AS1Q96NR2 134 aa9.27□□□□□ -0.93
HLA-A-206ENST00000479320 A6NED7 52 aa9.26□□□□□ -0.93
HLA-A-206ENST00000479320 FLGP20930 4061 aaPredicted RBP9.26□□□□□ -0.93
HLA-A-206ENST00000479320 A8MUU9 505 aa9.25□□□□□ -0.93
HLA-A-206ENST00000479320 LORP23490 312 aaPredicted RBP9.25□□□□□ -0.93
HLA-A-206ENST00000479320 KRTAP10-6P60371 365 aaPredicted RBP9.25□□□□□ -0.93
HLA-A-206ENST00000479320 M0R2T5 61 aa9.24□□□□□ -0.93
HLA-A-206ENST00000479320 C7orf65Q6ZTY9 151 aa9.24□□□□□ -0.93
HLA-A-206ENST00000479320 LCA10Q71F78 164 aa9.23□□□□□ -0.93
HLA-A-206ENST00000479320 RBM12B-AS1Q9P1G2 102 aa9.22□□□□□ -0.93
HLA-A-206ENST00000479320 MMP24-AS1A0A0U1RRL7 71 aa9.19□□□□□ -0.94
HLA-A-206ENST00000479320 LINC00313P59037 77 aa9.17□□□□□ -0.94
HLA-A-206ENST00000479320 SPTSSBQ8NFR3 76 aa9.17□□□□□ -0.94
HLA-A-206ENST00000479320 DEFB116Q30KQ4 102 aa9.16□□□□□ -0.94
HLA-A-206ENST00000479320 KRTAP16-1A8MUX0 517 aa9.14□□□□□ -0.95
HLA-A-206ENST00000479320 NOTCH2NLQ7Z3S9 236 aa9.12□□□□□ -0.95
HLA-A-206ENST00000479320 A8MU10 97 aa9.09□□□□□ -0.95
HLA-A-206ENST00000479320 IGHV6-1A0A0B4J1U7 121 aa9.07□□□□□ -0.96
HLA-A-206ENST00000479320 C8orf17Q9NRJ1 99 aa9.05□□□□□ -0.96
HLA-A-206ENST00000479320 A0A1B0GVX0 72 aa9.02□□□□□ -0.97
HLA-A-206ENST00000479320 HRES1P13985 223 aa9.02□□□□□ -0.97
HLA-A-206ENST00000479320 C8orf87E5RJ46 101 aa9.01□□□□□ -0.97
HLA-A-206ENST00000479320 MRPL34Q9BQ48 92 aaKnown RBP8.99□□□□□ -0.97
HLA-A-206ENST00000479320 ACYP2P14621 99 aa8.95□□□□□ -0.98
HLA-A-206ENST00000479320 SPINK7P58062 85 aa8.94□□□□□ -0.98
HLA-A-206ENST00000479320 KRTAP9-8Q9BYQ0 159 aa8.93□□□□□ -0.98
HLA-A-206ENST00000479320 KRTAP9-7A8MTY7 169 aa8.92□□□□□ -0.98
HLA-A-206ENST00000479320 SPATA8Q6RVD6 105 aa8.86□□□□□ -0.99
HLA-A-206ENST00000479320 DMAC1Q96GE9 116 aa8.86□□□□□ -0.99
HLA-A-206ENST00000479320 MT2AP02795 61 aa8.79□□□□□ -1
HLA-A-206ENST00000479320 LINC01554Q52M75 96 aa8.78□□□□□ -1
HLA-A-206ENST00000479320 A0A1B0GU69 56 aa8.77□□□□□ -1.01
HLA-A-206ENST00000479320 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.77□□□□□ -1.01
HLA-A-206ENST00000479320 USH2AO75445 5202 aa8.76□□□□□ -1.01
HLA-A-206ENST00000479320 UQCR11O14957 56 aa8.75□□□□□ -1.01
HLA-A-206ENST00000479320 MT1FP04733 61 aa8.71□□□□□ -1.02
HLA-A-206ENST00000479320 MIR22HGQ0VDD5 57 aa8.69□□□□□ -1.02
HLA-A-206ENST00000479320 SSPOA2VEC9 5147 aa8.69□□□□□ -1.02
HLA-A-206ENST00000479320 KRTAP10-10P60014 251 aa8.67□□□□□ -1.02
HLA-A-206ENST00000479320 Q5W150 140 aa8.66□□□□□ -1.02
HLA-A-206ENST00000479320 IGKV2-30P06310 120 aa8.65□□□□□ -1.02
HLA-A-206ENST00000479320 KRTAP9-3Q9BYQ3 159 aa8.64□□□□□ -1.03
HLA-A-206ENST00000479320 LCE2BO14633 110 aa8.62□□□□□ -1.03
HLA-A-206ENST00000479320 PRAC1Q96KF2 57 aa8.6□□□□□ -1.03
HLA-A-206ENST00000479320 IGKV2D-30A0A075B6S6 120 aa8.52□□□□□ -1.05
HLA-A-206ENST00000479320 H1FX-AS1Q4G0G2 97 aa8.51□□□□□ -1.05
HLA-A-206ENST00000479320 ADM2Q7Z4H4 148 aa8.49□□□□□ -1.05
HLA-A-206ENST00000479320 FCGBPQ9Y6R7 5405 aaPredicted RBP8.48□□□□□ -1.05
HLA-A-206ENST00000479320 KRTAP19-1Q8IUB9 90 aa8.48□□□□□ -1.05
HLA-A-206ENST00000479320 CSAG1Q6PB30 78 aa8.43□□□□□ -1.06
HLA-A-206ENST00000479320 H3BS24 57 aa8.39□□□□□ -1.07
HLA-A-206ENST00000479320 KRTAP25-1Q3LHN0 102 aa8.31□□□□□ -1.08
HLA-A-206ENST00000479320 KRTAP19-6Q3LI70 58 aa8.3□□□□□ -1.08
HLA-A-206ENST00000479320 SYNE2Q8WXH0 6885 aaKnown RBP8.3□□□□□ -1.08
HLA-A-206ENST00000479320 KRTAP3-1Q9BYR8 98 aa8.28□□□□□ -1.08
HLA-A-206ENST00000479320 MACF1Q9UPN3 7388 aaKnown RBP8.22□□□□□ -1.09
HLA-A-206ENST00000479320 K7ERS5 55 aa8.22□□□□□ -1.09
HLA-A-206ENST00000479320 ROMO1P60602 79 aa8.19□□□□□ -1.1
HLA-A-206ENST00000479320 S4R3F8 94 aa8.19□□□□□ -1.1
HLA-A-206ENST00000479320 A0A1B0GU33 70 aa8.18□□□□□ -1.1
HLA-A-206ENST00000479320 H0YAA0 97 aa8.18□□□□□ -1.1
HLA-A-206ENST00000479320 KRTAP3-3Q9BYR6 98 aa8.04□□□□□ -1.12
HLA-A-206ENST00000479320 SPRR2GQ9BYE4 73 aa8.01□□□□□ -1.13
HLA-A-206ENST00000479320 MT1BP07438 61 aa8□□□□□ -1.13
HLA-A-206ENST00000479320 KRTAP19-8Q3LI54 63 aa7.97□□□□□ -1.13
HLA-A-206ENST00000479320 KRTAP6-3Q3LI67 103 aa7.92□□□□□ -1.14
HLA-A-206ENST00000479320 NEBP20929 6669 aa7.88□□□□□ -1.15
HLA-A-206ENST00000479320 CRIPTQ9P021 101 aa7.84□□□□□ -1.15
HLA-A-206ENST00000479320 KRTAP10-5P60370 271 aa7.81□□□□□ -1.16
HLA-A-206ENST00000479320 P0C880 135 aa7.79□□□□□ -1.16
HLA-A-206ENST00000479320 KRTAP20-1Q3LI63 56 aa7.73□□□□□ -1.17
HLA-A-206ENST00000479320 SPINT4Q6UDR6 99 aa7.71□□□□□ -1.18
HLA-A-206ENST00000479320 MUC12Q9UKN1 5478 aa7.66□□□□□ -1.18
HLA-A-206ENST00000479320 KRTAP15-1Q3LI76 137 aa7.65□□□□□ -1.18
HLA-A-206ENST00000479320 KRTAP3-2Q9BYR7 98 aa7.59□□□□□ -1.19
HLA-A-206ENST00000479320 KRTAP5-9P26371 169 aa7.54□□□□□ -1.2
HLA-A-206ENST00000479320 KRTAP13-4Q3LI77 160 aa7.52□□□□□ -1.2
HLA-A-206ENST00000479320 R4GN34 69 aa7.52□□□□□ -1.21
HLA-A-206ENST00000479320 PLAC4Q8WY50 150 aa7.5□□□□□ -1.21
HLA-A-206ENST00000479320 KMT2DO14686 5537 aa7.48□□□□□ -1.21
HLA-A-206ENST00000479320 MT1XP80297 61 aa7.48□□□□□ -1.21
HLA-A-206ENST00000479320 PRO2289Q9P1D8 64 aa7.48□□□□□ -1.21
HLA-A-206ENST00000479320 NDUFAF8A1L188 74 aa7.47□□□□□ -1.21
HLA-A-206ENST00000479320 M0QZ58 72 aa7.47□□□□□ -1.21
HLA-A-206ENST00000479320 A0A0D9SG42 100 aa7.46□□□□□ -1.22
HLA-A-206ENST00000479320 MDN1Q9NU22 5596 aa7.42□□□□□ -1.22
HLA-A-206ENST00000479320 KRTAP12-1P59990 96 aa7.39□□□□□ -1.23
HLA-A-206ENST00000479320 KRTAP12-2P59991 146 aa7.36□□□□□ -1.23
HLA-A-206ENST00000479320 C10orf95Q9H7T3 257 aa7.36□□□□□ -1.23
HLA-A-206ENST00000479320 SPRR2FQ96RM1 72 aa7.3□□□□□ -1.24
HLA-A-206ENST00000479320 KRTAP2-3P0C7H8 128 aa7.29□□□□□ -1.24
HLA-A-206ENST00000479320 KRTAP2-4Q9BYR9 128 aa7.29□□□□□ -1.24
HLA-A-206ENST00000479320 KRTAP8-1Q8IUC2 63 aa7.27□□□□□ -1.25
HLA-A-206ENST00000479320 SPRR2EP22531 72 aa7.21□□□□□ -1.26
HLA-A-206ENST00000479320 SPRR2BP35325 72 aa7.21□□□□□ -1.26
HLA-A-206ENST00000479320 SPRR2AP35326 72 aa7.21□□□□□ -1.26
HLA-A-206ENST00000479320 KRTAP4-8A0A0G2JLE6 195 aa7.19□□□□□ -1.26
HLA-A-206ENST00000479320 KRTAP4-8Q9BYQ9 185 aa7.19□□□□□ -1.26
HLA-A-206ENST00000479320 KRTAP10-7P60409 375 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms