RNA–Protein interactions for RNA: ENST00000479239.1

LRRC47-203, Transcript of leucine rich repeat containing 47, humanhuman

TSL 3

Gene LRRC47, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-203ENST00000479239 PRAC1Q96KF2 57 aa3.36□□□□□ -1.87
LRRC47-203ENST00000479239 CYSTM1Q9H1C7 97 aa3.36□□□□□ -1.87
LRRC47-203ENST00000479239 PRR4Q16378 134 aa3.35□□□□□ -1.87
LRRC47-203ENST00000479239 Q5W150 140 aa3.35□□□□□ -1.87
LRRC47-203ENST00000479239 ZCCHC13Q8WW36 166 aaKnown RBP3.35□□□□□ -1.87
LRRC47-203ENST00000479239 CRCT1Q9UGL9 99 aa3.35□□□□□ -1.87
LRRC47-203ENST00000479239 A8MUU9 505 aa3.33□□□□□ -1.88
LRRC47-203ENST00000479239 H7BZZ5 65 aa3.33□□□□□ -1.88
LRRC47-203ENST00000479239 KRTAP13-3Q3SY46 172 aa3.33□□□□□ -1.88
LRRC47-203ENST00000479239 C20orf166-AS1Q96NR2 134 aa3.33□□□□□ -1.88
LRRC47-203ENST00000479239 LOC101927531A0A1B0GV80 90 aa3.32□□□□□ -1.88
LRRC47-203ENST00000479239 TMEM258P61165 79 aa3.32□□□□□ -1.88
LRRC47-203ENST00000479239 IGKV2D-30A0A075B6S6 120 aa3.3□□□□□ -1.88
LRRC47-203ENST00000479239 FAM236DA0A1B0GTK5 79 aa3.3□□□□□ -1.88
LRRC47-203ENST00000479239 FAM236CP0DP71 79 aa3.3□□□□□ -1.88
LRRC47-203ENST00000479239 CYP4F30PQ9H0H9 118 aa3.3□□□□□ -1.88
LRRC47-203ENST00000479239 PCOTHQ58A44 107 aa3.29□□□□□ -1.88
LRRC47-203ENST00000479239 RPL37P61927 97 aaKnown RBP3.28□□□□□ -1.88
LRRC47-203ENST00000479239 ATP11AUNQ6ZP68 121 aa3.28□□□□□ -1.88
LRRC47-203ENST00000479239 ATP5EP56381 51 aaPredicted RBP3.27□□□□□ -1.89
LRRC47-203ENST00000479239 TPRXLQ17RH7 258 aa3.27□□□□□ -1.89
LRRC47-203ENST00000479239 LPAP08519 4548 aa3.26□□□□□ -1.89
LRRC47-203ENST00000479239 SPANXA2-OT1Q8N9U9 137 aa3.26□□□□□ -1.89
LRRC47-203ENST00000479239 HRES1P13985 223 aa3.25□□□□□ -1.89
LRRC47-203ENST00000479239 C7orf65Q6ZTY9 151 aa3.25□□□□□ -1.89
LRRC47-203ENST00000479239 SPINK7P58062 85 aa3.24□□□□□ -1.89
LRRC47-203ENST00000479239 SERP1Q9Y6X1 66 aa3.23□□□□□ -1.89
LRRC47-203ENST00000479239 RPS28P62857 69 aaKnown RBP3.22□□□□□ -1.89
LRRC47-203ENST00000479239 C4orf26Q17RF5 130 aa3.19□□□□□ -1.9
LRRC47-203ENST00000479239 ACYP2P14621 99 aa3.18□□□□□ -1.9
LRRC47-203ENST00000479239 DMAC1Q96GE9 116 aa3.18□□□□□ -1.9
LRRC47-203ENST00000479239 COA5Q86WW8 74 aa3.17□□□□□ -1.9
LRRC47-203ENST00000479239 A8MUN3 132 aa3.16□□□□□ -1.9
LRRC47-203ENST00000479239 SMIM26A0A096LP01 95 aa3.15□□□□□ -1.91
LRRC47-203ENST00000479239 CHKB-CPT1BH3BT56 60 aa3.15□□□□□ -1.91
LRRC47-203ENST00000479239 COX6B2Q6YFQ2 88 aa3.15□□□□□ -1.91
LRRC47-203ENST00000479239 MUC17Q685J3 4493 aa3.12□□□□□ -1.91
LRRC47-203ENST00000479239 RBM12B-AS1Q9P1G2 102 aa3.11□□□□□ -1.91
LRRC47-203ENST00000479239 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
LRRC47-203ENST00000479239 SEC61GP60059 68 aa3.09□□□□□ -1.91
LRRC47-203ENST00000479239 SPTSSBQ8NFR3 76 aa3.09□□□□□ -1.91
LRRC47-203ENST00000479239 KRTAP4-1Q9BYQ7 146 aa3.09□□□□□ -1.91
LRRC47-203ENST00000479239 H1FX-AS1Q4G0G2 97 aa3.08□□□□□ -1.92
LRRC47-203ENST00000479239 V9GYY9 64 aa3.08□□□□□ -1.92
LRRC47-203ENST00000479239 Q1T7F1 81 aa3.07□□□□□ -1.92
LRRC47-203ENST00000479239 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
LRRC47-203ENST00000479239 S4R3F8 94 aa3.06□□□□□ -1.92
LRRC47-203ENST00000479239 LCE1AQ5T7P2 110 aa3.05□□□□□ -1.92
LRRC47-203ENST00000479239 LINC01558Q9Y6Z2 57 aa3.05□□□□□ -1.92
LRRC47-203ENST00000479239 PRR15LQ9BU68 103 aa3.04□□□□□ -1.92
LRRC47-203ENST00000479239 PSPHP1O15172 72 aa3.03□□□□□ -1.92
LRRC47-203ENST00000479239 LCA10Q71F78 164 aa3.03□□□□□ -1.92
LRRC47-203ENST00000479239 A0A1B0GU69 56 aa3.01□□□□□ -1.93
LRRC47-203ENST00000479239 KRTAP19-2Q3LHN2 52 aa3□□□□□ -1.93
LRRC47-203ENST00000479239 CSAG1Q6PB30 78 aa3□□□□□ -1.93
LRRC47-203ENST00000479239 Q5VV11 94 aa2.99□□□□□ -1.93
LRRC47-203ENST00000479239 SYNE2Q8WXH0 6885 aaKnown RBP2.97□□□□□ -1.93
LRRC47-203ENST00000479239 A6NED7 52 aa2.94□□□□□ -1.94
LRRC47-203ENST00000479239 FLGP20930 4061 aaPredicted RBP2.93□□□□□ -1.94
LRRC47-203ENST00000479239 ADM2Q7Z4H4 148 aa2.93□□□□□ -1.94
LRRC47-203ENST00000479239 A0A1B0GU33 70 aa2.92□□□□□ -1.94
LRRC47-203ENST00000479239 MACF1Q9UPN3 7388 aaKnown RBP2.92□□□□□ -1.94
LRRC47-203ENST00000479239 SSPOA2VEC9 5147 aa2.91□□□□□ -1.94
LRRC47-203ENST00000479239 UQCR11O14957 56 aa2.91□□□□□ -1.94
LRRC47-203ENST00000479239 MT3P25713 68 aa2.91□□□□□ -1.94
LRRC47-203ENST00000479239 KRTAP10-6P60371 365 aaPredicted RBP2.91□□□□□ -1.94
LRRC47-203ENST00000479239 MT1HP80294 61 aa2.91□□□□□ -1.94
LRRC47-203ENST00000479239 BRK1Q8WUW1 75 aa2.91□□□□□ -1.94
LRRC47-203ENST00000479239 H0YAA0 97 aa2.9□□□□□ -1.95
LRRC47-203ENST00000479239 P0C880 135 aa2.9□□□□□ -1.95
LRRC47-203ENST00000479239 FCGBPQ9Y6R7 5405 aaPredicted RBP2.9□□□□□ -1.95
LRRC47-203ENST00000479239 M0R2T5 61 aa2.89□□□□□ -1.95
LRRC47-203ENST00000479239 MIR22HGQ0VDD5 57 aa2.89□□□□□ -1.95
LRRC47-203ENST00000479239 USH2AO75445 5202 aa2.88□□□□□ -1.95
LRRC47-203ENST00000479239 CDC42SE1Q9NRR8 79 aa2.88□□□□□ -1.95
LRRC47-203ENST00000479239 SPATA8Q6RVD6 105 aa2.87□□□□□ -1.95
LRRC47-203ENST00000479239 A8MU10 97 aa2.85□□□□□ -1.95
LRRC47-203ENST00000479239 M0QZ58 72 aa2.84□□□□□ -1.95
LRRC47-203ENST00000479239 PRO0628Q9UI54 55 aa2.84□□□□□ -1.95
LRRC47-203ENST00000479239 NEBP20929 6669 aa2.84□□□□□ -1.96
LRRC47-203ENST00000479239 KRTAP13-4Q3LI77 160 aa2.83□□□□□ -1.96
LRRC47-203ENST00000479239 KRTAP5-9P26371 169 aa2.82□□□□□ -1.96
LRRC47-203ENST00000479239 R4GN34 69 aa2.82□□□□□ -1.96
LRRC47-203ENST00000479239 A0A0D9SG42 100 aa2.81□□□□□ -1.96
LRRC47-203ENST00000479239 KRTAP6-3Q3LI67 103 aa2.8□□□□□ -1.96
LRRC47-203ENST00000479239 CRIPTQ9P021 101 aa2.8□□□□□ -1.96
LRRC47-203ENST00000479239 MT2AP02795 61 aa2.78□□□□□ -1.96
LRRC47-203ENST00000479239 LINC01554Q52M75 96 aa2.78□□□□□ -1.96
LRRC47-203ENST00000479239 KRTAP2-2Q9BYT5 123 aa2.78□□□□□ -1.96
LRRC47-203ENST00000479239 K7ERS5 55 aa2.77□□□□□ -1.97
LRRC47-203ENST00000479239 KRTAP10-10P60014 251 aa2.77□□□□□ -1.97
LRRC47-203ENST00000479239 KRTAP20-1Q3LI63 56 aa2.77□□□□□ -1.97
LRRC47-203ENST00000479239 MT1FP04733 61 aa2.76□□□□□ -1.97
LRRC47-203ENST00000479239 PMAIP1Q13794 54 aa2.76□□□□□ -1.97
LRRC47-203ENST00000479239 SPINT4Q6UDR6 99 aa2.75□□□□□ -1.97
LRRC47-203ENST00000479239 A6NN06 94 aa2.73□□□□□ -1.97
LRRC47-203ENST00000479239 KRTAP12-2P59991 146 aa2.73□□□□□ -1.97
LRRC47-203ENST00000479239 KRTAP12-1P59990 96 aa2.72□□□□□ -1.97
LRRC47-203ENST00000479239 SPRR2GQ9BYE4 73 aa2.72□□□□□ -1.97
LRRC47-203ENST00000479239 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms