RNA–Protein interactions for RNA: ENST00000479162.5

NUP35-209, Transcript of nucleoporin 35, humanhuman

TSL 2

Gene NUP35, Length 2,828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-209ENST00000479162 FRAS1Q86XX4 4008 aa5.3□□□□□ -1.56
NUP35-209ENST00000479162 KRTAP10-8P60410 259 aa5.3□□□□□ -1.56
NUP35-209ENST00000479162 INE1O15225 51 aa5.29□□□□□ -1.56
NUP35-209ENST00000479162 KRTAP12-2P59991 146 aa5.29□□□□□ -1.56
NUP35-209ENST00000479162 DNAH2Q9P225 4427 aa5.29□□□□□ -1.56
NUP35-209ENST00000479162 KRTAP10-6P60371 365 aaPredicted RBP5.27□□□□□ -1.57
NUP35-209ENST00000479162 KRTAP3-1Q9BYR8 98 aa5.26□□□□□ -1.57
NUP35-209ENST00000479162 TGP01266 2768 aa5.25□□□□□ -1.57
NUP35-209ENST00000479162 FAT2Q9NYQ8 4349 aa5.23□□□□□ -1.57
NUP35-209ENST00000479162 LORP23490 312 aaPredicted RBP5.2□□□□□ -1.58
NUP35-209ENST00000479162 DYNC1H1Q14204 4646 aaKnown RBP5.2□□□□□ -1.58
NUP35-209ENST00000479162 HECTD4Q9Y4D8 3996 aa5.2□□□□□ -1.58
NUP35-209ENST00000479162 KRTAP12-1P59990 96 aa5.19□□□□□ -1.58
NUP35-209ENST00000479162 PKD1P98161 4303 aa5.18□□□□□ -1.58
NUP35-209ENST00000479162 KMT2CQ8NEZ4 4911 aaKnown RBP5.18□□□□□ -1.58
NUP35-209ENST00000479162 DNAH11Q96DT5 4516 aa5.17□□□□□ -1.58
NUP35-209ENST00000479162 DNAH8Q96JB1 4490 aa5.16□□□□□ -1.58
NUP35-209ENST00000479162 RYR3Q15413 4870 aa5.15□□□□□ -1.58
NUP35-209ENST00000479162 HYDINQ4G0P3 5121 aa5.15□□□□□ -1.58
NUP35-209ENST00000479162 KMT2AQ03164 3969 aa5.14□□□□□ -1.59
NUP35-209ENST00000479162 KRTAP10-2P60368 255 aa5.14□□□□□ -1.59
NUP35-209ENST00000479162 PKHD1L1Q86WI1 4243 aa5.1□□□□□ -1.59
NUP35-209ENST00000479162 KRTAP10-1P60331 282 aa5.1□□□□□ -1.59
NUP35-209ENST00000479162 KRTAP9-6A0A140TA67 174 aa5.09□□□□□ -1.6
NUP35-209ENST00000479162 BIRC6Q9NR09 4857 aa5.08□□□□□ -1.6
NUP35-209ENST00000479162 VPS13BQ7Z7G8 4022 aa5.05□□□□□ -1.6
NUP35-209ENST00000479162 DNAH5Q8TE73 4624 aa5.04□□□□□ -1.6
NUP35-209ENST00000479162 PP632Q6XCG6 107 aa5.04□□□□□ -1.6
NUP35-209ENST00000479162 KRTAP10-4P60372 401 aaPredicted RBP5.01□□□□□ -1.61
NUP35-209ENST00000479162 SPRR5A0A1B0GTR4 108 aa5.01□□□□□ -1.61
NUP35-209ENST00000479162 APOBP04114 4563 aaKnown RBP5□□□□□ -1.61
NUP35-209ENST00000479162 HERC2O95714 4834 aa4.98□□□□□ -1.61
NUP35-209ENST00000479162 PKHD1P08F94 4074 aa4.97□□□□□ -1.61
NUP35-209ENST00000479162 LRP1BQ9NZR2 4599 aa4.97□□□□□ -1.61
NUP35-209ENST00000479162 RYR1P21817 5038 aa4.94□□□□□ -1.62
NUP35-209ENST00000479162 Q5VSD8 79 aa4.94□□□□□ -1.62
NUP35-209ENST00000479162 HSPG2P98160 4391 aa4.94□□□□□ -1.62
NUP35-209ENST00000479162 EPPK1P58107 5090 aaKnown RBP4.93□□□□□ -1.62
NUP35-209ENST00000479162 M0QZ58 72 aa4.93□□□□□ -1.62
NUP35-209ENST00000479162 KRTAP13-2Q52LG2 175 aa4.88□□□□□ -1.63
NUP35-209ENST00000479162 PCLOQ9Y6V0 5065 aa4.87□□□□□ -1.63
NUP35-209ENST00000479162 KRTAP4-5Q9BYR2 181 aa4.82□□□□□ -1.64
NUP35-209ENST00000479162 SMR3BP02814 79 aaPredicted RBP4.81□□□□□ -1.64
NUP35-209ENST00000479162 KRTAP1-4P0C5Y4 121 aa4.78□□□□□ -1.64
NUP35-209ENST00000479162 MT1HL1P0DM35 61 aa4.77□□□□□ -1.65
NUP35-209ENST00000479162 KIAA1109Q2LD37 5005 aa4.76□□□□□ -1.65
NUP35-209ENST00000479162 RPS29P62273 56 aaKnown RBP4.76□□□□□ -1.65
NUP35-209ENST00000479162 FAT1Q14517 4588 aa4.75□□□□□ -1.65
NUP35-209ENST00000479162 FAT3Q8TDW7 4589 aa4.74□□□□□ -1.65
NUP35-209ENST00000479162 C9orf92A6NGG3 77 aa4.73□□□□□ -1.65
NUP35-209ENST00000479162 MYCBP2O75592 4640 aa4.71□□□□□ -1.65
NUP35-209ENST00000479162 ABCA13Q86UQ4 5058 aa4.65□□□□□ -1.67
NUP35-209ENST00000479162 TNXBP22105 4242 aa4.65□□□□□ -1.67
NUP35-209ENST00000479162 KRTAP9-2Q9BYQ4 174 aa4.63□□□□□ -1.67
NUP35-209ENST00000479162 LRP1Q07954 4544 aaKnown RBP4.48□□□□□ -1.69
NUP35-209ENST00000479162 MUC17Q685J3 4493 aa4.47□□□□□ -1.69
NUP35-209ENST00000479162 TNP1P09430 55 aa4.44□□□□□ -1.7
NUP35-209ENST00000479162 HMCN2Q8NDA2 5059 aa4.4□□□□□ -1.7
NUP35-209ENST00000479162 HERC1Q15751 4861 aa4.36□□□□□ -1.71
NUP35-209ENST00000479162 KRTAP10-10P60014 251 aa4.35□□□□□ -1.71
NUP35-209ENST00000479162 KRTAP9-7A8MTY7 169 aa4.35□□□□□ -1.71
NUP35-209ENST00000479162 LOC100996750A0A140TA64 210 aa4.33□□□□□ -1.72
NUP35-209ENST00000479162 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
NUP35-209ENST00000479162 CRCT1Q9UGL9 99 aa4.23□□□□□ -1.73
NUP35-209ENST00000479162 UBR4Q5T4S7 5183 aa4.18□□□□□ -1.74
NUP35-209ENST00000479162 KRTAP4-1Q9BYQ7 146 aa4.15□□□□□ -1.74
NUP35-209ENST00000479162 KRTAP19-2Q3LHN2 52 aa4.15□□□□□ -1.75
NUP35-209ENST00000479162 LPAP08519 4548 aa4.14□□□□□ -1.75
NUP35-209ENST00000479162 LRP2P98164 4655 aa4.09□□□□□ -1.76
NUP35-209ENST00000479162 RNF213Q63HN8 5207 aa4.05□□□□□ -1.76
NUP35-209ENST00000479162 MT1HP80294 61 aa4.02□□□□□ -1.77
NUP35-209ENST00000479162 LCE3AQ5TA76 89 aa4.02□□□□□ -1.77
NUP35-209ENST00000479162 KRTAP2-2Q9BYT5 123 aa4.01□□□□□ -1.77
NUP35-209ENST00000479162 KRTAP9-1A8MXZ3 250 aaPredicted RBP4□□□□□ -1.77
NUP35-209ENST00000479162 KRTAP10-12P60413 245 aa3.99□□□□□ -1.77
NUP35-209ENST00000479162 LCE4AQ5TA78 99 aa3.97□□□□□ -1.77
NUP35-209ENST00000479162 FLGP20930 4061 aaPredicted RBP3.94□□□□□ -1.78
NUP35-209ENST00000479162 KRTAP8-1Q8IUC2 63 aa3.93□□□□□ -1.78
NUP35-209ENST00000479162 SSPOA2VEC9 5147 aa3.93□□□□□ -1.78
NUP35-209ENST00000479162 FAT4Q6V0I7 4981 aa3.89□□□□□ -1.79
NUP35-209ENST00000479162 MUC2Q02817 5179 aa3.87□□□□□ -1.79
NUP35-209ENST00000479162 KRTAP9-8Q9BYQ0 159 aa3.85□□□□□ -1.79
NUP35-209ENST00000479162 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.79
NUP35-209ENST00000479162 KRTAP9-4Q9BYQ2 154 aa3.83□□□□□ -1.8
NUP35-209ENST00000479162 KRTAP9-9Q9BYP9 154 aa3.82□□□□□ -1.8
NUP35-209ENST00000479162 KRTAP2-3P0C7H8 128 aa3.81□□□□□ -1.8
NUP35-209ENST00000479162 KRTAP2-4Q9BYR9 128 aa3.81□□□□□ -1.8
NUP35-209ENST00000479162 KRTAP2-1Q9BYU5 128 aa3.81□□□□□ -1.8
NUP35-209ENST00000479162 KRTAP12-3P60328 96 aa3.8□□□□□ -1.8
NUP35-209ENST00000479162 M0R2T5 61 aa3.8□□□□□ -1.8
NUP35-209ENST00000479162 MT2AP02795 61 aa3.8□□□□□ -1.8
NUP35-209ENST00000479162 LCE1AQ5T7P2 110 aa3.77□□□□□ -1.81
NUP35-209ENST00000479162 KRTAP10-5P60370 271 aa3.76□□□□□ -1.81
NUP35-209ENST00000479162 GPR98Q8WXG9 6306 aa3.76□□□□□ -1.81
NUP35-209ENST00000479162 KRTAP6-3Q3LI67 103 aa3.75□□□□□ -1.81
NUP35-209ENST00000479162 KRTAP9-3Q9BYQ3 159 aa3.74□□□□□ -1.81
NUP35-209ENST00000479162 MT1FP04733 61 aa3.73□□□□□ -1.81
NUP35-209ENST00000479162 KRTAP19-1Q8IUB9 90 aa3.68□□□□□ -1.82
NUP35-209ENST00000479162 SPRR2GQ9BYE4 73 aa3.66□□□□□ -1.82
NUP35-209ENST00000479162 KRTAP19-8Q3LI54 63 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms