RNA–Protein interactions for RNA: ENST00000479008.1

SMARCAL1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-211ENST00000479008 ACYP2P14621 99 aa6.6□□□□□ -1.35
SMARCAL1-211ENST00000479008 KRTAP3-3Q9BYR6 98 aa6.56□□□□□ -1.36
SMARCAL1-211ENST00000479008 PCP4P48539 62 aa6.55□□□□□ -1.36
SMARCAL1-211ENST00000479008 KRTAP10-6P60371 365 aaPredicted RBP6.55□□□□□ -1.36
SMARCAL1-211ENST00000479008 CSAG1Q6PB30 78 aa6.54□□□□□ -1.36
SMARCAL1-211ENST00000479008 LORP23490 312 aaPredicted RBP6.52□□□□□ -1.37
SMARCAL1-211ENST00000479008 CHKB-CPT1BH3BT56 60 aa6.5□□□□□ -1.37
SMARCAL1-211ENST00000479008 TMEM258P61165 79 aa6.49□□□□□ -1.37
SMARCAL1-211ENST00000479008 ATP5EP56381 51 aaPredicted RBP6.48□□□□□ -1.37
SMARCAL1-211ENST00000479008 COA5Q86WW8 74 aa6.48□□□□□ -1.37
SMARCAL1-211ENST00000479008 KRTAP9-8Q9BYQ0 159 aa6.45□□□□□ -1.38
SMARCAL1-211ENST00000479008 SPTSSBQ8NFR3 76 aa6.43□□□□□ -1.38
SMARCAL1-211ENST00000479008 MT2AP02795 61 aa6.42□□□□□ -1.38
SMARCAL1-211ENST00000479008 MT1FP04733 61 aa6.37□□□□□ -1.39
SMARCAL1-211ENST00000479008 KRTAP10-10P60014 251 aa6.36□□□□□ -1.39
SMARCAL1-211ENST00000479008 H0YAA0 97 aa6.33□□□□□ -1.4
SMARCAL1-211ENST00000479008 ADM2Q7Z4H4 148 aa6.32□□□□□ -1.4
SMARCAL1-211ENST00000479008 LCE2DQ5TA82 110 aaPredicted RBP6.29□□□□□ -1.4
SMARCAL1-211ENST00000479008 SERP1Q9Y6X1 66 aa6.28□□□□□ -1.4
SMARCAL1-211ENST00000479008 KRTAP3-2Q9BYR7 98 aa6.25□□□□□ -1.41
SMARCAL1-211ENST00000479008 P0C880 135 aa6.24□□□□□ -1.41
SMARCAL1-211ENST00000479008 KRTAP9-3Q9BYQ3 159 aa6.23□□□□□ -1.41
SMARCAL1-211ENST00000479008 SEC61GP60059 68 aa6.18□□□□□ -1.42
SMARCAL1-211ENST00000479008 CRIPTQ9P021 101 aa6.18□□□□□ -1.42
SMARCAL1-211ENST00000479008 A0A1B0GU69 56 aa6.13□□□□□ -1.43
SMARCAL1-211ENST00000479008 KRTAP19-1Q8IUB9 90 aa6.13□□□□□ -1.43
SMARCAL1-211ENST00000479008 KRTAP9-2Q9BYQ4 174 aa6.13□□□□□ -1.43
SMARCAL1-211ENST00000479008 SPRR2GQ9BYE4 73 aa6.12□□□□□ -1.43
SMARCAL1-211ENST00000479008 LINC01558Q9Y6Z2 57 aa6.12□□□□□ -1.43
SMARCAL1-211ENST00000479008 LCE2BO14633 110 aa6.11□□□□□ -1.43
SMARCAL1-211ENST00000479008 RPS28P62857 69 aaKnown RBP6.11□□□□□ -1.43
SMARCAL1-211ENST00000479008 R4GN34 69 aa6.11□□□□□ -1.43
SMARCAL1-211ENST00000479008 M0QZ58 72 aa6.1□□□□□ -1.43
SMARCAL1-211ENST00000479008 SMIM26A0A096LP01 95 aa6.08□□□□□ -1.44
SMARCAL1-211ENST00000479008 PRR15LQ9BU68 103 aa6.07□□□□□ -1.44
SMARCAL1-211ENST00000479008 V9GYY9 64 aa6.04□□□□□ -1.44
SMARCAL1-211ENST00000479008 A0A1B0GU33 70 aa6.03□□□□□ -1.44
SMARCAL1-211ENST00000479008 Q1T7F1 81 aa6.02□□□□□ -1.45
SMARCAL1-211ENST00000479008 KRTAP19-8Q3LI54 63 aa6.02□□□□□ -1.45
SMARCAL1-211ENST00000479008 KRTAP13-4Q3LI77 160 aa6.01□□□□□ -1.45
SMARCAL1-211ENST00000479008 LINC01554Q52M75 96 aa6□□□□□ -1.45
SMARCAL1-211ENST00000479008 Q5VV11 94 aa5.99□□□□□ -1.45
SMARCAL1-211ENST00000479008 USH2AO75445 5202 aa5.98□□□□□ -1.45
SMARCAL1-211ENST00000479008 PSPHP1O15172 72 aa5.96□□□□□ -1.46
SMARCAL1-211ENST00000479008 MT1BP07438 61 aa5.96□□□□□ -1.46
SMARCAL1-211ENST00000479008 SPATA8Q6RVD6 105 aa5.96□□□□□ -1.46
SMARCAL1-211ENST00000479008 A0A0D9SG42 100 aa5.89□□□□□ -1.47
SMARCAL1-211ENST00000479008 UQCR11O14957 56 aa5.88□□□□□ -1.47
SMARCAL1-211ENST00000479008 FSIP2Q5CZC0 6907 aa5.87□□□□□ -1.47
SMARCAL1-211ENST00000479008 PLAC4Q8WY50 150 aa5.87□□□□□ -1.47
SMARCAL1-211ENST00000479008 CRCT1Q9UGL9 99 aa5.86□□□□□ -1.47
SMARCAL1-211ENST00000479008 A6NN06 94 aa5.84□□□□□ -1.47
SMARCAL1-211ENST00000479008 A8MU10 97 aa5.84□□□□□ -1.47
SMARCAL1-211ENST00000479008 SSPOA2VEC9 5147 aa5.83□□□□□ -1.48
SMARCAL1-211ENST00000479008 KRTAP19-6Q3LI70 58 aa5.81□□□□□ -1.48
SMARCAL1-211ENST00000479008 MIR22HGQ0VDD5 57 aa5.8□□□□□ -1.48
SMARCAL1-211ENST00000479008 KRTAP9-6A0A140TA67 174 aa5.78□□□□□ -1.48
SMARCAL1-211ENST00000479008 A6NED7 52 aa5.78□□□□□ -1.48
SMARCAL1-211ENST00000479008 SPINT4Q6UDR6 99 aa5.78□□□□□ -1.48
SMARCAL1-211ENST00000479008 KRTAP12-1P59990 96 aa5.77□□□□□ -1.49
SMARCAL1-211ENST00000479008 KRTAP12-2P59991 146 aa5.73□□□□□ -1.49
SMARCAL1-211ENST00000479008 KRTAP10-5P60370 271 aa5.73□□□□□ -1.49
SMARCAL1-211ENST00000479008 MT1XP80297 61 aa5.7□□□□□ -1.5
SMARCAL1-211ENST00000479008 CAMK2N1Q7Z7J9 78 aa5.7□□□□□ -1.5
SMARCAL1-211ENST00000479008 PRO2289Q9P1D8 64 aa5.68□□□□□ -1.5
SMARCAL1-211ENST00000479008 FCGBPQ9Y6R7 5405 aaPredicted RBP5.63□□□□□ -1.51
SMARCAL1-211ENST00000479008 CDC42SE1Q9NRR8 79 aa5.62□□□□□ -1.51
SMARCAL1-211ENST00000479008 K7ERS5 55 aa5.6□□□□□ -1.51
SMARCAL1-211ENST00000479008 BRK1Q8WUW1 75 aa5.49□□□□□ -1.53
SMARCAL1-211ENST00000479008 C10orf95Q9H7T3 257 aa5.48□□□□□ -1.53
SMARCAL1-211ENST00000479008 KRTAP10-7P60409 375 aaPredicted RBP5.46□□□□□ -1.54
SMARCAL1-211ENST00000479008 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.45□□□□□ -1.54
SMARCAL1-211ENST00000479008 KRTAP10-12P60413 245 aa5.41□□□□□ -1.54
SMARCAL1-211ENST00000479008 TNP1P09430 55 aa5.36□□□□□ -1.55
SMARCAL1-211ENST00000479008 MACF1Q9UPN3 7388 aaKnown RBP5.36□□□□□ -1.55
SMARCAL1-211ENST00000479008 KRTAP4-8A0A0G2JLE6 195 aa5.33□□□□□ -1.56
SMARCAL1-211ENST00000479008 KRTAP4-8Q9BYQ9 185 aa5.33□□□□□ -1.56
SMARCAL1-211ENST00000479008 ROMO1P60602 79 aa5.31□□□□□ -1.56
SMARCAL1-211ENST00000479008 KRTAP25-1Q3LHN0 102 aa5.28□□□□□ -1.56
SMARCAL1-211ENST00000479008 KMT2DO14686 5537 aa5.27□□□□□ -1.57
SMARCAL1-211ENST00000479008 KRTAP8-1Q8IUC2 63 aa5.27□□□□□ -1.57
SMARCAL1-211ENST00000479008 KRTAP9-7A8MTY7 169 aa5.24□□□□□ -1.57
SMARCAL1-211ENST00000479008 SYNE2Q8WXH0 6885 aaKnown RBP5.23□□□□□ -1.57
SMARCAL1-211ENST00000479008 KRTAP6-3Q3LI67 103 aa5.22□□□□□ -1.57
SMARCAL1-211ENST00000479008 LCE3AQ5TA76 89 aa5.2□□□□□ -1.58
SMARCAL1-211ENST00000479008 PRO0628Q9UI54 55 aa5.18□□□□□ -1.58
SMARCAL1-211ENST00000479008 PMAIP1Q13794 54 aa5.17□□□□□ -1.58
SMARCAL1-211ENST00000479008 KRTAP5-9P26371 169 aa5.16□□□□□ -1.58
SMARCAL1-211ENST00000479008 SPRR2FQ96RM1 72 aa5.15□□□□□ -1.59
SMARCAL1-211ENST00000479008 KRTAP19-5Q3LI72 72 aa5.09□□□□□ -1.59
SMARCAL1-211ENST00000479008 KRTAP23-1A1A580 65 aa5.08□□□□□ -1.6
SMARCAL1-211ENST00000479008 KRTAP19-7Q3SYF9 63 aa5.08□□□□□ -1.6
SMARCAL1-211ENST00000479008 MT1EP04732 61 aa5.02□□□□□ -1.61
SMARCAL1-211ENST00000479008 PP632Q6XCG6 107 aa5.01□□□□□ -1.61
SMARCAL1-211ENST00000479008 KRTAP12-3P60328 96 aa4.99□□□□□ -1.61
SMARCAL1-211ENST00000479008 MUC12Q9UKN1 5478 aa4.99□□□□□ -1.61
SMARCAL1-211ENST00000479008 SPRR2EP22531 72 aa4.97□□□□□ -1.61
SMARCAL1-211ENST00000479008 SPRR2BP35325 72 aa4.97□□□□□ -1.61
SMARCAL1-211ENST00000479008 SPRR2AP35326 72 aa4.97□□□□□ -1.61
SMARCAL1-211ENST00000479008 LCE1AQ5T7P2 110 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 212.7 ms