RNA–Protein interactions for RNA: ENST00000477523.1

RGPD5-209, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 1 (best)

Gene RGPD5, Length 6,902 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-209ENST00000477523 Q5VV11 94 aa2.31□□□□□ -2.04
RGPD5-209ENST00000477523 KRTAP3-1Q9BYR8 98 aa2.31□□□□□ -2.04
RGPD5-209ENST00000477523 VPS13BQ7Z7G8 4022 aa2.31□□□□□ -2.04
RGPD5-209ENST00000477523 HERC1Q15751 4861 aa2.3□□□□□ -2.04
RGPD5-209ENST00000477523 K7ERS5 55 aa2.3□□□□□ -2.04
RGPD5-209ENST00000477523 A0A1B0GU33 70 aa2.29□□□□□ -2.04
RGPD5-209ENST00000477523 FRAS1Q86XX4 4008 aa2.29□□□□□ -2.04
RGPD5-209ENST00000477523 HMCN2Q8NDA2 5059 aa2.29□□□□□ -2.04
RGPD5-209ENST00000477523 LCA10Q71F78 164 aa2.29□□□□□ -2.04
RGPD5-209ENST00000477523 PRO0628Q9UI54 55 aa2.29□□□□□ -2.04
RGPD5-209ENST00000477523 MIR22HGQ0VDD5 57 aa2.29□□□□□ -2.04
RGPD5-209ENST00000477523 M0R2T5 61 aa2.28□□□□□ -2.04
RGPD5-209ENST00000477523 CDC42SE1Q9NRR8 79 aa2.27□□□□□ -2.05
RGPD5-209ENST00000477523 UBR4Q5T4S7 5183 aa2.27□□□□□ -2.05
RGPD5-209ENST00000477523 ADM2Q7Z4H4 148 aa2.25□□□□□ -2.05
RGPD5-209ENST00000477523 RNF213Q63HN8 5207 aa2.25□□□□□ -2.05
RGPD5-209ENST00000477523 PMAIP1Q13794 54 aa2.25□□□□□ -2.05
RGPD5-209ENST00000477523 R4GN34 69 aa2.24□□□□□ -2.05
RGPD5-209ENST00000477523 A0A0D9SG42 100 aa2.23□□□□□ -2.05
RGPD5-209ENST00000477523 LRP2P98164 4655 aa2.23□□□□□ -2.05
RGPD5-209ENST00000477523 LINC01554Q52M75 96 aa2.23□□□□□ -2.05
RGPD5-209ENST00000477523 SPATA8Q6RVD6 105 aa2.22□□□□□ -2.05
RGPD5-209ENST00000477523 KRTAP4-1Q9BYQ7 146 aa2.22□□□□□ -2.05
RGPD5-209ENST00000477523 M0QZ58 72 aa2.22□□□□□ -2.05
RGPD5-209ENST00000477523 KRTAP3-3Q9BYR6 98 aa2.2□□□□□ -2.06
RGPD5-209ENST00000477523 SPINT4Q6UDR6 99 aa2.2□□□□□ -2.06
RGPD5-209ENST00000477523 P0C880 135 aa2.19□□□□□ -2.06
RGPD5-209ENST00000477523 H0YAA0 97 aa2.18□□□□□ -2.06
RGPD5-209ENST00000477523 PKHD1L1Q86WI1 4243 aa2.18□□□□□ -2.06
RGPD5-209ENST00000477523 A8MU10 97 aa2.18□□□□□ -2.06
RGPD5-209ENST00000477523 KRTAP10-6P60371 365 aaPredicted RBP2.17□□□□□ -2.06
RGPD5-209ENST00000477523 TNXBP22105 4242 aa2.16□□□□□ -2.06
RGPD5-209ENST00000477523 KRTAP3-2Q9BYR7 98 aa2.15□□□□□ -2.07
RGPD5-209ENST00000477523 CAMK2N1Q7Z7J9 78 aa2.15□□□□□ -2.07
RGPD5-209ENST00000477523 CRIPTQ9P021 101 aa2.14□□□□□ -2.07
RGPD5-209ENST00000477523 KRTAP10-10P60014 251 aa2.12□□□□□ -2.07
RGPD5-209ENST00000477523 KRTAP13-4Q3LI77 160 aa2.11□□□□□ -2.07
RGPD5-209ENST00000477523 KTN1-AS1Q86SY8 53 aa2.11□□□□□ -2.07
RGPD5-209ENST00000477523 A6NN06 94 aa2.11□□□□□ -2.07
RGPD5-209ENST00000477523 LPAP08519 4548 aa2.1□□□□□ -2.07
RGPD5-209ENST00000477523 FAT4Q6V0I7 4981 aa2.1□□□□□ -2.07
RGPD5-209ENST00000477523 PLAC4Q8WY50 150 aa2.1□□□□□ -2.07
RGPD5-209ENST00000477523 MT1HP80294 61 aa2.09□□□□□ -2.07
RGPD5-209ENST00000477523 KRTAP19-2Q3LHN2 52 aa2.09□□□□□ -2.08
RGPD5-209ENST00000477523 ROMO1P60602 79 aa2.08□□□□□ -2.08
RGPD5-209ENST00000477523 H3BS24 57 aa2.08□□□□□ -2.08
RGPD5-209ENST00000477523 MUC2Q02817 5179 aa2.08□□□□□ -2.08
RGPD5-209ENST00000477523 LCE2CQ5TA81 110 aa2.08□□□□□ -2.08
RGPD5-209ENST00000477523 MUC17Q685J3 4493 aa2.06□□□□□ -2.08
RGPD5-209ENST00000477523 LORP23490 312 aaPredicted RBP2.06□□□□□ -2.08
RGPD5-209ENST00000477523 PRAC1Q96KF2 57 aa2.06□□□□□ -2.08
RGPD5-209ENST00000477523 KRTAP12-1P59990 96 aa2.06□□□□□ -2.08
RGPD5-209ENST00000477523 KMT2DO14686 5537 aa2.05□□□□□ -2.08
RGPD5-209ENST00000477523 KRTAP12-2P59991 146 aa2.05□□□□□ -2.08
RGPD5-209ENST00000477523 MT2AP02795 61 aa2.04□□□□□ -2.08
RGPD5-209ENST00000477523 OBSCNQ5VST9 7968 aa2.02□□□□□ -2.09
RGPD5-209ENST00000477523 MT1FP04733 61 aa2.02□□□□□ -2.09
RGPD5-209ENST00000477523 TNP1P09430 55 aa1.99□□□□□ -2.09
RGPD5-209ENST00000477523 KRTAP25-1Q3LHN0 102 aa1.99□□□□□ -2.09
RGPD5-209ENST00000477523 SPRR2GQ9BYE4 73 aa1.99□□□□□ -2.09
RGPD5-209ENST00000477523 KRTAP9-8Q9BYQ0 159 aa1.98□□□□□ -2.09
RGPD5-209ENST00000477523 PRO2289Q9P1D8 64 aa1.97□□□□□ -2.09
RGPD5-209ENST00000477523 KRTAP19-1Q8IUB9 90 aa1.96□□□□□ -2.1
RGPD5-209ENST00000477523 C10orf95Q9H7T3 257 aa1.96□□□□□ -2.1
RGPD5-209ENST00000477523 LCE2AQ5TA79 106 aaPredicted RBP1.95□□□□□ -2.1
RGPD5-209ENST00000477523 PP632Q6XCG6 107 aa1.94□□□□□ -2.1
RGPD5-209ENST00000477523 FLGP20930 4061 aaPredicted RBP1.94□□□□□ -2.1
RGPD5-209ENST00000477523 KRTAP19-8Q3LI54 63 aa1.93□□□□□ -2.1
RGPD5-209ENST00000477523 KRTAP9-3Q9BYQ3 159 aa1.92□□□□□ -2.1
RGPD5-209ENST00000477523 USH2AO75445 5202 aa1.91□□□□□ -2.1
RGPD5-209ENST00000477523 MT1BP07438 61 aa1.89□□□□□ -2.11
RGPD5-209ENST00000477523 KRTAP10-7P60409 375 aaPredicted RBP1.89□□□□□ -2.11
RGPD5-209ENST00000477523 FSIP2Q5CZC0 6907 aa1.88□□□□□ -2.11
RGPD5-209ENST00000477523 LCE2BO14633 110 aa1.86□□□□□ -2.11
RGPD5-209ENST00000477523 KRTAP10-12P60413 245 aa1.84□□□□□ -2.11
RGPD5-209ENST00000477523 SSPOA2VEC9 5147 aa1.84□□□□□ -2.11
RGPD5-209ENST00000477523 KRTAP23-1A1A580 65 aa1.84□□□□□ -2.12
RGPD5-209ENST00000477523 MT1XP80297 61 aa1.84□□□□□ -2.12
RGPD5-209ENST00000477523 KRTAP10-5P60370 271 aa1.83□□□□□ -2.12
RGPD5-209ENST00000477523 LUZP6Q538Z0 58 aa1.82□□□□□ -2.12
RGPD5-209ENST00000477523 LCE3AQ5TA76 89 aa1.81□□□□□ -2.12
RGPD5-209ENST00000477523 LCE2DQ5TA82 110 aaPredicted RBP1.78□□□□□ -2.12
RGPD5-209ENST00000477523 KRTAP12-3P60328 96 aa1.78□□□□□ -2.13
RGPD5-209ENST00000477523 KRTAP8-1Q8IUC2 63 aa1.77□□□□□ -2.13
RGPD5-209ENST00000477523 A0A0A0MQY5 61 aa1.76□□□□□ -2.13
RGPD5-209ENST00000477523 KRTAP19-6Q3LI70 58 aa1.76□□□□□ -2.13
RGPD5-209ENST00000477523 KRTAP15-1Q3LI76 137 aa1.75□□□□□ -2.13
RGPD5-209ENST00000477523 NDUFAF8A1L188 74 aa1.74□□□□□ -2.13
RGPD5-209ENST00000477523 KRTAP9-2Q9BYQ4 174 aa1.73□□□□□ -2.13
RGPD5-209ENST00000477523 FCGBPQ9Y6R7 5405 aaPredicted RBP1.71□□□□□ -2.13
RGPD5-209ENST00000477523 KRTAP19-5Q3LI72 72 aa1.71□□□□□ -2.14
RGPD5-209ENST00000477523 KRTAP4-8A0A0G2JLE6 195 aa1.71□□□□□ -2.14
RGPD5-209ENST00000477523 KRTAP4-8Q9BYQ9 185 aa1.71□□□□□ -2.14
RGPD5-209ENST00000477523 CRCT1Q9UGL9 99 aa1.71□□□□□ -2.14
RGPD5-209ENST00000477523 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
RGPD5-209ENST00000477523 SPRR2FQ96RM1 72 aa1.66□□□□□ -2.14
RGPD5-209ENST00000477523 KRTAP19-4Q3LI73 84 aa1.65□□□□□ -2.15
RGPD5-209ENST00000477523 HMCN1Q96RW7 5635 aa1.64□□□□□ -2.15
RGPD5-209ENST00000477523 KRTAP19-7Q3SYF9 63 aa1.63□□□□□ -2.15
RGPD5-209ENST00000477523 MT1EP04732 61 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms