RNA–Protein interactions for RNA: ENST00000476231.1

SYF2-204, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 1 (best)

Gene SYF2, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-204ENST00000476231 A6NN06 94 aa10.08□□□□□ -0.8
SYF2-204ENST00000476231 J3QL48 77 aa10.08□□□□□ -0.8
SYF2-204ENST00000476231 SPATA8Q6RVD6 105 aa10.08□□□□□ -0.8
SYF2-204ENST00000476231 UQCR11O14957 56 aa10.05□□□□□ -0.8
SYF2-204ENST00000476231 KRTAP3-1Q9BYR8 98 aa10.01□□□□□ -0.81
SYF2-204ENST00000476231 KTN1-AS1Q86SY8 53 aa10□□□□□ -0.81
SYF2-204ENST00000476231 SEC61GP60059 68 aa9.99□□□□□ -0.81
SYF2-204ENST00000476231 MIR22HGQ0VDD5 57 aa9.97□□□□□ -0.81
SYF2-204ENST00000476231 COX6B2Q6YFQ2 88 aa9.96□□□□□ -0.81
SYF2-204ENST00000476231 LPAP08519 4548 aa9.84□□□□□ -0.83
SYF2-204ENST00000476231 LRP2P98164 4655 aa9.83□□□□□ -0.84
SYF2-204ENST00000476231 PCLOQ9Y6V0 5065 aa9.74□□□□□ -0.85
SYF2-204ENST00000476231 SEC61BP60468 96 aaKnown RBP9.74□□□□□ -0.85
SYF2-204ENST00000476231 A0A1B0GU33 70 aa9.73□□□□□ -0.85
SYF2-204ENST00000476231 H1FX-AS1Q4G0G2 97 aa9.71□□□□□ -0.86
SYF2-204ENST00000476231 H0YAA0 97 aa9.67□□□□□ -0.86
SYF2-204ENST00000476231 KRTAP3-3Q9BYR6 98 aa9.62□□□□□ -0.87
SYF2-204ENST00000476231 RBM12B-AS1Q9P1G2 102 aa9.61□□□□□ -0.87
SYF2-204ENST00000476231 S4R3F8 94 aa9.57□□□□□ -0.88
SYF2-204ENST00000476231 MUC17Q685J3 4493 aa9.57□□□□□ -0.88
SYF2-204ENST00000476231 HERC1Q15751 4861 aa9.55□□□□□ -0.88
SYF2-204ENST00000476231 HMCN2Q8NDA2 5059 aa9.53□□□□□ -0.88
SYF2-204ENST00000476231 KRTAP10-6P60371 365 aaPredicted RBP9.5□□□□□ -0.89
SYF2-204ENST00000476231 KRTAP4-1Q9BYQ7 146 aa9.48□□□□□ -0.89
SYF2-204ENST00000476231 ADM2Q7Z4H4 148 aa9.45□□□□□ -0.9
SYF2-204ENST00000476231 PRAC1Q96KF2 57 aa9.45□□□□□ -0.9
SYF2-204ENST00000476231 KRTAP3-2Q9BYR7 98 aa9.44□□□□□ -0.9
SYF2-204ENST00000476231 K7ERS5 55 aa9.42□□□□□ -0.9
SYF2-204ENST00000476231 CSAG1Q6PB30 78 aa9.31□□□□□ -0.92
SYF2-204ENST00000476231 KRTAP13-4Q3LI77 160 aa9.29□□□□□ -0.92
SYF2-204ENST00000476231 KRTAP19-2Q3LHN2 52 aa9.28□□□□□ -0.92
SYF2-204ENST00000476231 P0C880 135 aa9.26□□□□□ -0.93
SYF2-204ENST00000476231 LINC01554Q52M75 96 aa9.21□□□□□ -0.94
SYF2-204ENST00000476231 MUC2Q02817 5179 aa9.16□□□□□ -0.94
SYF2-204ENST00000476231 M0QZ58 72 aa9.15□□□□□ -0.94
SYF2-204ENST00000476231 ROMO1P60602 79 aa9.14□□□□□ -0.95
SYF2-204ENST00000476231 A0A0D9SG42 100 aa9.13□□□□□ -0.95
SYF2-204ENST00000476231 KRTAP25-1Q3LHN0 102 aa9.13□□□□□ -0.95
SYF2-204ENST00000476231 RNF213Q63HN8 5207 aa9.03□□□□□ -0.96
SYF2-204ENST00000476231 FLGP20930 4061 aaPredicted RBP9.02□□□□□ -0.96
SYF2-204ENST00000476231 UBR4Q5T4S7 5183 aa9.01□□□□□ -0.97
SYF2-204ENST00000476231 KRTAP12-1P59990 96 aa8.99□□□□□ -0.97
SYF2-204ENST00000476231 LCE2CQ5TA81 110 aa8.99□□□□□ -0.97
SYF2-204ENST00000476231 KRTAP12-2P59991 146 aa8.98□□□□□ -0.97
SYF2-204ENST00000476231 LCE2DQ5TA82 110 aaPredicted RBP8.93□□□□□ -0.98
SYF2-204ENST00000476231 SPINT4Q6UDR6 99 aa8.9□□□□□ -0.99
SYF2-204ENST00000476231 R4GN34 69 aa8.85□□□□□ -0.99
SYF2-204ENST00000476231 CRIPTQ9P021 101 aa8.83□□□□□ -1
SYF2-204ENST00000476231 MT1HP80294 61 aa8.8□□□□□ -1
SYF2-204ENST00000476231 FAT4Q6V0I7 4981 aa8.79□□□□□ -1
SYF2-204ENST00000476231 M0R2T5 61 aa8.74□□□□□ -1.01
SYF2-204ENST00000476231 LORP23490 312 aaPredicted RBP8.74□□□□□ -1.01
SYF2-204ENST00000476231 C10orf95Q9H7T3 257 aa8.62□□□□□ -1.03
SYF2-204ENST00000476231 KRTAP9-8Q9BYQ0 159 aa8.5□□□□□ -1.05
SYF2-204ENST00000476231 MT2AP02795 61 aa8.49□□□□□ -1.05
SYF2-204ENST00000476231 MT1FP04733 61 aa8.44□□□□□ -1.06
SYF2-204ENST00000476231 KRTAP10-10P60014 251 aa8.44□□□□□ -1.06
SYF2-204ENST00000476231 SPRR2GQ9BYE4 73 aa8.42□□□□□ -1.06
SYF2-204ENST00000476231 KRTAP19-1Q8IUB9 90 aa8.37□□□□□ -1.07
SYF2-204ENST00000476231 CAMK2N1Q7Z7J9 78 aa8.36□□□□□ -1.07
SYF2-204ENST00000476231 LCE2AQ5TA79 106 aaPredicted RBP8.33□□□□□ -1.08
SYF2-204ENST00000476231 KRTAP15-1Q3LI76 137 aa8.28□□□□□ -1.08
SYF2-204ENST00000476231 PP632Q6XCG6 107 aa8.28□□□□□ -1.08
SYF2-204ENST00000476231 PLAC4Q8WY50 150 aa8.19□□□□□ -1.1
SYF2-204ENST00000476231 KRTAP9-3Q9BYQ3 159 aa8.19□□□□□ -1.1
SYF2-204ENST00000476231 KRTAP19-8Q3LI54 63 aa8.17□□□□□ -1.1
SYF2-204ENST00000476231 KRTAP23-1A1A580 65 aa8.14□□□□□ -1.11
SYF2-204ENST00000476231 TNP1P09430 55 aa8.1□□□□□ -1.11
SYF2-204ENST00000476231 MT1BP07438 61 aa8.04□□□□□ -1.12
SYF2-204ENST00000476231 H3BS24 57 aa7.98□□□□□ -1.13
SYF2-204ENST00000476231 LCE2BO14633 110 aa7.92□□□□□ -1.14
SYF2-204ENST00000476231 NDUFAF8A1L188 74 aa7.88□□□□□ -1.15
SYF2-204ENST00000476231 MT1XP80297 61 aa7.82□□□□□ -1.16
SYF2-204ENST00000476231 KRTAP10-5P60370 271 aa7.81□□□□□ -1.16
SYF2-204ENST00000476231 PRO2289Q9P1D8 64 aa7.73□□□□□ -1.17
SYF2-204ENST00000476231 USH2AO75445 5202 aa7.68□□□□□ -1.18
SYF2-204ENST00000476231 LUZP6Q538Z0 58 aa7.62□□□□□ -1.19
SYF2-204ENST00000476231 SPRR5A0A1B0GTR4 108 aa7.6□□□□□ -1.19
SYF2-204ENST00000476231 LCE3AQ5TA76 89 aa7.6□□□□□ -1.19
SYF2-204ENST00000476231 KRTAP8-1Q8IUC2 63 aa7.55□□□□□ -1.2
SYF2-204ENST00000476231 KRTAP10-7P60409 375 aaPredicted RBP7.51□□□□□ -1.21
SYF2-204ENST00000476231 KRTAP10-12P60413 245 aa7.48□□□□□ -1.21
SYF2-204ENST00000476231 SSPOA2VEC9 5147 aa7.44□□□□□ -1.22
SYF2-204ENST00000476231 KRTAP19-6Q3LI70 58 aa7.41□□□□□ -1.22
SYF2-204ENST00000476231 KRTAP12-3P60328 96 aa7.3□□□□□ -1.24
SYF2-204ENST00000476231 FSIP2Q5CZC0 6907 aa7.21□□□□□ -1.25
SYF2-204ENST00000476231 KRTAP4-8A0A0G2JLE6 195 aa7.17□□□□□ -1.26
SYF2-204ENST00000476231 KRTAP4-8Q9BYQ9 185 aa7.17□□□□□ -1.26
SYF2-204ENST00000476231 A0A0A0MQY5 61 aa7.14□□□□□ -1.27
SYF2-204ENST00000476231 KMT2DO14686 5537 aa7.11□□□□□ -1.27
SYF2-204ENST00000476231 KRTAP19-5Q3LI72 72 aa7.1□□□□□ -1.27
SYF2-204ENST00000476231 KRTAP9-2Q9BYQ4 174 aa7.09□□□□□ -1.27
SYF2-204ENST00000476231 FCGBPQ9Y6R7 5405 aaPredicted RBP7.05□□□□□ -1.28
SYF2-204ENST00000476231 KRTAP19-7Q3SYF9 63 aa6.97□□□□□ -1.29
SYF2-204ENST00000476231 LCE3CQ5T5A8 94 aa6.89□□□□□ -1.31
SYF2-204ENST00000476231 CRCT1Q9UGL9 99 aa6.88□□□□□ -1.31
SYF2-204ENST00000476231 KRTAP19-4Q3LI73 84 aa6.88□□□□□ -1.31
SYF2-204ENST00000476231 MT1EP04732 61 aa6.84□□□□□ -1.32
SYF2-204ENST00000476231 KRTAP9-6A0A140TA67 174 aa6.73□□□□□ -1.33
SYF2-204ENST00000476231 MT1LQ93083 61 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms