RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
VPS13D-206ENST00000476045 LINC00472Q9H8W2 130 aa2.43□□□□□ -2.02
VPS13D-206ENST00000476045 MUC2Q02817 5179 aa2.43□□□□□ -2.02
VPS13D-206ENST00000476045 FAT4Q6V0I7 4981 aa2.43□□□□□ -2.02
VPS13D-206ENST00000476045 MMP24-AS1A0A0U1RRL7 71 aa2.42□□□□□ -2.02
VPS13D-206ENST00000476045 KRTAP16-1A8MUX0 517 aa2.42□□□□□ -2.02
VPS13D-206ENST00000476045 A8MWP4 228 aa2.42□□□□□ -2.02
VPS13D-206ENST00000476045 RPS29P62273 56 aaKnown RBP2.42□□□□□ -2.02
VPS13D-206ENST00000476045 BRK1Q8WUW1 75 aa2.42□□□□□ -2.02
VPS13D-206ENST00000476045 ANAPC11Q9NYG5 84 aa2.42□□□□□ -2.02
VPS13D-206ENST00000476045 TRAV22A0A0B4J277 110 aa2.41□□□□□ -2.02
VPS13D-206ENST00000476045 NDUFB1O75438 58 aa2.41□□□□□ -2.02
VPS13D-206ENST00000476045 MOBPQ13875 183 aa2.41□□□□□ -2.02
VPS13D-206ENST00000476045 KRTAP13-2Q52LG2 175 aa2.41□□□□□ -2.02
VPS13D-206ENST00000476045 CYP4F30PQ9H0H9 118 aa2.41□□□□□ -2.02
VPS13D-206ENST00000476045 PRO0628Q9UI54 55 aa2.41□□□□□ -2.02
VPS13D-206ENST00000476045 PSPHP1O15172 72 aa2.4□□□□□ -2.03
VPS13D-206ENST00000476045 PCOTHQ58A44 107 aa2.4□□□□□ -2.03
VPS13D-206ENST00000476045 C8orf17Q9NRJ1 99 aa2.4□□□□□ -2.03
VPS13D-206ENST00000476045 MUC17Q685J3 4493 aa2.4□□□□□ -2.03
VPS13D-206ENST00000476045 IGHV6-1A0A0B4J1U7 121 aa2.39□□□□□ -2.03
VPS13D-206ENST00000476045 H3BPC8 53 aa2.39□□□□□ -2.03
VPS13D-206ENST00000476045 NDUFS5O43920 106 aa2.39□□□□□ -2.03
VPS13D-206ENST00000476045 SPINK1P00995 79 aa2.39□□□□□ -2.03
VPS13D-206ENST00000476045 LINC00483Q53H64 154 aa2.39□□□□□ -2.03
VPS13D-206ENST00000476045 Q96NJ1 140 aa2.39□□□□□ -2.03
VPS13D-206ENST00000476045 A0A1B0GVX0 72 aa2.38□□□□□ -2.03
VPS13D-206ENST00000476045 A8MUN3 132 aa2.38□□□□□ -2.03
VPS13D-206ENST00000476045 Q1T7F1 81 aa2.38□□□□□ -2.03
VPS13D-206ENST00000476045 KRTAP5-9P26371 169 aa2.37□□□□□ -2.03
VPS13D-206ENST00000476045 CD164Q04900 197 aa2.37□□□□□ -2.03
VPS13D-206ENST00000476045 SPANXA2-OT1Q8N9U9 137 aa2.37□□□□□ -2.03
VPS13D-206ENST00000476045 RETNLBQ9BQ08 111 aa2.37□□□□□ -2.03
VPS13D-206ENST00000476045 LIMD2Q9BT23 127 aa2.37□□□□□ -2.03
VPS13D-206ENST00000476045 NDUFAF8A1L188 74 aa2.36□□□□□ -2.03
VPS13D-206ENST00000476045 ASB16-AS1Q495Z4 193 aa2.36□□□□□ -2.03
VPS13D-206ENST00000476045 SSBP3-AS1Q7Z2R9 100 aa2.36□□□□□ -2.03
VPS13D-206ENST00000476045 COA5Q86WW8 74 aa2.36□□□□□ -2.03
VPS13D-206ENST00000476045 MRPL34Q9BQ48 92 aaKnown RBP2.36□□□□□ -2.03
VPS13D-206ENST00000476045 PRR15LQ9BU68 103 aa2.36□□□□□ -2.03
VPS13D-206ENST00000476045 KRTAP13-3Q3SY46 172 aa2.35□□□□□ -2.03
VPS13D-206ENST00000476045 C1orf195Q5TG92 126 aa2.35□□□□□ -2.03
VPS13D-206ENST00000476045 TP53AIP1Q9HCN2 124 aa2.35□□□□□ -2.03
VPS13D-206ENST00000476045 CHKB-CPT1BH3BT56 60 aa2.34□□□□□ -2.03
VPS13D-206ENST00000476045 Q5VV11 94 aa2.34□□□□□ -2.03
VPS13D-206ENST00000476045 V9GYY9 64 aa2.34□□□□□ -2.03
VPS13D-206ENST00000476045 A8MU10 97 aa2.32□□□□□ -2.04
VPS13D-206ENST00000476045 HRES1P13985 223 aa2.32□□□□□ -2.04
VPS13D-206ENST00000476045 Q5W150 140 aa2.32□□□□□ -2.04
VPS13D-206ENST00000476045 LOC101927531A0A1B0GV80 90 aa2.31□□□□□ -2.04
VPS13D-206ENST00000476045 C8orf87E5RJ46 101 aa2.31□□□□□ -2.04
VPS13D-206ENST00000476045 A6NED7 52 aa2.3□□□□□ -2.04
VPS13D-206ENST00000476045 LINC01558Q9Y6Z2 57 aa2.3□□□□□ -2.04
VPS13D-206ENST00000476045 FLGP20930 4061 aaPredicted RBP2.29□□□□□ -2.04
VPS13D-206ENST00000476045 LINC00313P59037 77 aa2.29□□□□□ -2.04
VPS13D-206ENST00000476045 SPTSSBQ8NFR3 76 aa2.29□□□□□ -2.04
VPS13D-206ENST00000476045 SPINK7P58062 85 aa2.28□□□□□ -2.04
VPS13D-206ENST00000476045 LCA10Q71F78 164 aa2.28□□□□□ -2.04
VPS13D-206ENST00000476045 ACYP2P14621 99 aa2.27□□□□□ -2.05
VPS13D-206ENST00000476045 PMAIP1Q13794 54 aa2.27□□□□□ -2.05
VPS13D-206ENST00000476045 DMAC1Q96GE9 116 aa2.25□□□□□ -2.05
VPS13D-206ENST00000476045 CDC42SE1Q9NRR8 79 aa2.25□□□□□ -2.05
VPS13D-206ENST00000476045 FSIP2Q5CZC0 6907 aa2.25□□□□□ -2.05
VPS13D-206ENST00000476045 RPL37P61927 97 aaKnown RBP2.24□□□□□ -2.05
VPS13D-206ENST00000476045 LCE3EQ5T5B0 92 aa2.24□□□□□ -2.05
VPS13D-206ENST00000476045 ATP11AUNQ6ZP68 121 aa2.24□□□□□ -2.05
VPS13D-206ENST00000476045 C9orf92A6NGG3 77 aa2.23□□□□□ -2.05
VPS13D-206ENST00000476045 A6NN06 94 aa2.23□□□□□ -2.05
VPS13D-206ENST00000476045 COX6B2Q6YFQ2 88 aa2.23□□□□□ -2.05
VPS13D-206ENST00000476045 C7orf65Q6ZTY9 151 aa2.23□□□□□ -2.05
VPS13D-206ENST00000476045 KRTAP4-1Q9BYQ7 146 aa2.23□□□□□ -2.05
VPS13D-206ENST00000476045 A0A1B0GU69 56 aa2.22□□□□□ -2.05
VPS13D-206ENST00000476045 MT1HP80294 61 aa2.22□□□□□ -2.05
VPS13D-206ENST00000476045 KRTAP19-2Q3LHN2 52 aa2.21□□□□□ -2.06
VPS13D-206ENST00000476045 KTN1-AS1Q86SY8 53 aa2.21□□□□□ -2.06
VPS13D-206ENST00000476045 CRCT1Q9UGL9 99 aa2.2□□□□□ -2.06
VPS13D-206ENST00000476045 M0R2T5 61 aa2.19□□□□□ -2.06
VPS13D-206ENST00000476045 MIR22HGQ0VDD5 57 aa2.18□□□□□ -2.06
VPS13D-206ENST00000476045 RBM12B-AS1Q9P1G2 102 aa2.18□□□□□ -2.06
VPS13D-206ENST00000476045 SPATA8Q6RVD6 105 aa2.17□□□□□ -2.06
VPS13D-206ENST00000476045 C20orf166-AS1Q96NR2 134 aa2.17□□□□□ -2.06
VPS13D-206ENST00000476045 A8MUU9 505 aa2.16□□□□□ -2.06
VPS13D-206ENST00000476045 UQCR11O14957 56 aa2.16□□□□□ -2.06
VPS13D-206ENST00000476045 ADM2Q7Z4H4 148 aa2.16□□□□□ -2.06
VPS13D-206ENST00000476045 KRTAP4-3Q9BYR4 195 aa2.16□□□□□ -2.06
VPS13D-206ENST00000476045 OBSCNQ5VST9 7968 aa2.15□□□□□ -2.06
VPS13D-206ENST00000476045 KRTAP12-2P59991 146 aa2.15□□□□□ -2.07
VPS13D-206ENST00000476045 LCE3AQ5TA76 89 aa2.14□□□□□ -2.07
VPS13D-206ENST00000476045 CAMK2N1Q7Z7J9 78 aa2.14□□□□□ -2.07
VPS13D-206ENST00000476045 A0A1B0GU33 70 aa2.1□□□□□ -2.07
VPS13D-206ENST00000476045 H1FX-AS1Q4G0G2 97 aa2.1□□□□□ -2.07
VPS13D-206ENST00000476045 H0YAA0 97 aa2.09□□□□□ -2.07
VPS13D-206ENST00000476045 SSPOA2VEC9 5147 aa2.08□□□□□ -2.08
VPS13D-206ENST00000476045 USH2AO75445 5202 aa2.08□□□□□ -2.08
VPS13D-206ENST00000476045 CSAG1Q6PB30 78 aa2.08□□□□□ -2.08
VPS13D-206ENST00000476045 MT2AP02795 61 aa2.06□□□□□ -2.08
VPS13D-206ENST00000476045 KRTAP5-5Q701N2 237 aaPredicted RBP2.06□□□□□ -2.08
VPS13D-206ENST00000476045 LINC01554Q52M75 96 aa2.05□□□□□ -2.08
VPS13D-206ENST00000476045 MACF1Q9UPN3 7388 aaKnown RBP2.05□□□□□ -2.08
VPS13D-206ENST00000476045 A0A0D9SG42 100 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms