RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 KRTAP10-4P60372 401 aaPredicted RBP3.93□□□□□ -1.78
UBR4-212ENST00000475973 PCOTHQ58A44 107 aa3.93□□□□□ -1.78
UBR4-212ENST00000475973 LCE5AQ5TCM9 118 aa3.93□□□□□ -1.78
UBR4-212ENST00000475973 LCE1DQ5T752 114 aa3.92□□□□□ -1.78
UBR4-212ENST00000475973 KTN1-AS1Q86SY8 53 aa3.91□□□□□ -1.78
UBR4-212ENST00000475973 ANAPC11Q9NYG5 84 aa3.91□□□□□ -1.78
UBR4-212ENST00000475973 IGKV2-30P06310 120 aa3.9□□□□□ -1.79
UBR4-212ENST00000475973 FLG2Q5D862 2391 aaPredicted RBP3.9□□□□□ -1.79
UBR4-212ENST00000475973 KRTAP4-8A0A0G2JLE6 195 aa3.89□□□□□ -1.79
UBR4-212ENST00000475973 ACYP2P14621 99 aa3.89□□□□□ -1.79
UBR4-212ENST00000475973 SPINK7P58062 85 aa3.89□□□□□ -1.79
UBR4-212ENST00000475973 KRTAP13-2Q52LG2 175 aa3.89□□□□□ -1.79
UBR4-212ENST00000475973 KRTAP1-4P0C5Y4 121 aa3.88□□□□□ -1.79
UBR4-212ENST00000475973 SPAG11AQ6PDA7 123 aa3.88□□□□□ -1.79
UBR4-212ENST00000475973 A6NED7 52 aa3.87□□□□□ -1.79
UBR4-212ENST00000475973 LINC00313P59037 77 aa3.85□□□□□ -1.79
UBR4-212ENST00000475973 SPATA8Q6RVD6 105 aa3.85□□□□□ -1.79
UBR4-212ENST00000475973 SPINK6Q6UWN8 80 aa3.85□□□□□ -1.79
UBR4-212ENST00000475973 RBM12B-AS1Q9P1G2 102 aa3.85□□□□□ -1.79
UBR4-212ENST00000475973 PKHD1L1Q86WI1 4243 aa3.84□□□□□ -1.79
UBR4-212ENST00000475973 MT1HL1P0DM35 61 aa3.84□□□□□ -1.79
UBR4-212ENST00000475973 RPS29P62273 56 aaKnown RBP3.83□□□□□ -1.8
UBR4-212ENST00000475973 C7orf65Q6ZTY9 151 aa3.83□□□□□ -1.8
UBR4-212ENST00000475973 IGKV2D-30A0A075B6S6 120 aa3.81□□□□□ -1.8
UBR4-212ENST00000475973 HMCN2Q8NDA2 5059 aa3.81□□□□□ -1.8
UBR4-212ENST00000475973 LRP1Q07954 4544 aaKnown RBP3.8□□□□□ -1.8
UBR4-212ENST00000475973 FAT3Q8TDW7 4589 aa3.8□□□□□ -1.8
UBR4-212ENST00000475973 SPTSSBQ8NFR3 76 aa3.79□□□□□ -1.8
UBR4-212ENST00000475973 SPINK1P00995 79 aa3.77□□□□□ -1.81
UBR4-212ENST00000475973 KRTAP10-8P60410 259 aa3.75□□□□□ -1.81
UBR4-212ENST00000475973 KRTAP4-9Q9BYQ8 210 aa3.75□□□□□ -1.81
UBR4-212ENST00000475973 A0A1B0GU69 56 aa3.74□□□□□ -1.81
UBR4-212ENST00000475973 UQCR11O14957 56 aa3.74□□□□□ -1.81
UBR4-212ENST00000475973 C20orf166-AS1Q96NR2 134 aa3.74□□□□□ -1.81
UBR4-212ENST00000475973 KRTAP4-7Q9BYR0 210 aa3.74□□□□□ -1.81
UBR4-212ENST00000475973 A8MUU9 505 aa3.73□□□□□ -1.81
UBR4-212ENST00000475973 UBR4Q5T4S7 5183 aa3.73□□□□□ -1.81
UBR4-212ENST00000475973 MIR22HGQ0VDD5 57 aa3.71□□□□□ -1.82
UBR4-212ENST00000475973 TNXBP22105 4242 aa3.7□□□□□ -1.82
UBR4-212ENST00000475973 TYMSOSQ8TAI1 123 aa3.69□□□□□ -1.82
UBR4-212ENST00000475973 KRTAP4-11Q9BYQ6 195 aa3.68□□□□□ -1.82
UBR4-212ENST00000475973 RETNLBQ9BQ08 111 aa3.67□□□□□ -1.82
UBR4-212ENST00000475973 LRP2P98164 4655 aa3.67□□□□□ -1.82
UBR4-212ENST00000475973 LINC01554Q52M75 96 aa3.66□□□□□ -1.82
UBR4-212ENST00000475973 LINC00304Q8N9R0 145 aa3.66□□□□□ -1.82
UBR4-212ENST00000475973 ADM2Q7Z4H4 148 aa3.64□□□□□ -1.83
UBR4-212ENST00000475973 H0YAA0 97 aa3.63□□□□□ -1.83
UBR4-212ENST00000475973 PRAC1Q96KF2 57 aa3.63□□□□□ -1.83
UBR4-212ENST00000475973 RNF213Q63HN8 5207 aa3.6□□□□□ -1.83
UBR4-212ENST00000475973 COX6B2Q6YFQ2 88 aa3.59□□□□□ -1.83
UBR4-212ENST00000475973 H1FX-AS1Q4G0G2 97 aa3.58□□□□□ -1.84
UBR4-212ENST00000475973 TPRXLQ17RH7 258 aa3.57□□□□□ -1.84
UBR4-212ENST00000475973 A0A1B0GU33 70 aa3.56□□□□□ -1.84
UBR4-212ENST00000475973 KRTAP4-2Q9BYR5 136 aa3.56□□□□□ -1.84
UBR4-212ENST00000475973 KRTAP10-6P60371 365 aaPredicted RBP3.54□□□□□ -1.84
UBR4-212ENST00000475973 CSAG1Q6PB30 78 aa3.54□□□□□ -1.84
UBR4-212ENST00000475973 LPAP08519 4548 aa3.54□□□□□ -1.84
UBR4-212ENST00000475973 KRTAP25-1Q3LHN0 102 aa3.52□□□□□ -1.85
UBR4-212ENST00000475973 C9orf92A6NGG3 77 aa3.51□□□□□ -1.85
UBR4-212ENST00000475973 RPL37P61927 97 aaKnown RBP3.49□□□□□ -1.85
UBR4-212ENST00000475973 LCE1AQ5T7P2 110 aa3.49□□□□□ -1.85
UBR4-212ENST00000475973 MUC2Q02817 5179 aa3.46□□□□□ -1.86
UBR4-212ENST00000475973 KRTAP13-4Q3LI77 160 aa3.45□□□□□ -1.86
UBR4-212ENST00000475973 ROMO1P60602 79 aa3.42□□□□□ -1.86
UBR4-212ENST00000475973 K7ERS5 55 aa3.39□□□□□ -1.87
UBR4-212ENST00000475973 MUC17Q685J3 4493 aa3.39□□□□□ -1.87
UBR4-212ENST00000475973 FAT4Q6V0I7 4981 aa3.38□□□□□ -1.87
UBR4-212ENST00000475973 P0C880 135 aa3.37□□□□□ -1.87
UBR4-212ENST00000475973 S4R3F8 94 aa3.37□□□□□ -1.87
UBR4-212ENST00000475973 KRTAP4-1Q9BYQ7 146 aa3.35□□□□□ -1.87
UBR4-212ENST00000475973 KRTAP12-1P59990 96 aa3.34□□□□□ -1.87
UBR4-212ENST00000475973 M0QZ58 72 aa3.32□□□□□ -1.88
UBR4-212ENST00000475973 KRTAP12-2P59991 146 aa3.31□□□□□ -1.88
UBR4-212ENST00000475973 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
UBR4-212ENST00000475973 MT3P25713 68 aa3.28□□□□□ -1.88
UBR4-212ENST00000475973 MT1HP80294 61 aa3.28□□□□□ -1.88
UBR4-212ENST00000475973 M0R2T5 61 aa3.27□□□□□ -1.89
UBR4-212ENST00000475973 KRTAP19-2Q3LHN2 52 aa3.26□□□□□ -1.89
UBR4-212ENST00000475973 A0A0D9SG42 100 aa3.25□□□□□ -1.89
UBR4-212ENST00000475973 CRIPTQ9P021 101 aa3.25□□□□□ -1.89
UBR4-212ENST00000475973 KRTAP9-8Q9BYQ0 159 aa3.23□□□□□ -1.89
UBR4-212ENST00000475973 CRCT1Q9UGL9 99 aa3.22□□□□□ -1.89
UBR4-212ENST00000475973 FSIP2Q5CZC0 6907 aa3.22□□□□□ -1.89
UBR4-212ENST00000475973 C10orf95Q9H7T3 257 aa3.21□□□□□ -1.9
UBR4-212ENST00000475973 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
UBR4-212ENST00000475973 SPINT4Q6UDR6 99 aa3.15□□□□□ -1.91
UBR4-212ENST00000475973 KRTAP2-2Q9BYT5 123 aa3.15□□□□□ -1.91
UBR4-212ENST00000475973 CAMK2N1Q7Z7J9 78 aa3.13□□□□□ -1.91
UBR4-212ENST00000475973 FLGP20930 4061 aaPredicted RBP3.11□□□□□ -1.91
UBR4-212ENST00000475973 R4GN34 69 aa3.09□□□□□ -1.91
UBR4-212ENST00000475973 PP632Q6XCG6 107 aa3.07□□□□□ -1.92
UBR4-212ENST00000475973 MT2AP02795 61 aa3.04□□□□□ -1.92
UBR4-212ENST00000475973 KRTAP10-10P60014 251 aa3.03□□□□□ -1.92
UBR4-212ENST00000475973 PLAC4Q8WY50 150 aa3.02□□□□□ -1.93
UBR4-212ENST00000475973 MT1FP04733 61 aa3.01□□□□□ -1.93
UBR4-212ENST00000475973 KRTAP5-3Q6L8H2 238 aa3.01□□□□□ -1.93
UBR4-212ENST00000475973 SPRR5A0A1B0GTR4 108 aa3□□□□□ -1.93
UBR4-212ENST00000475973 LCE1FQ5T754 118 aa3□□□□□ -1.93
UBR4-212ENST00000475973 USH2AO75445 5202 aa2.96□□□□□ -1.94
UBR4-212ENST00000475973 SPRR2GQ9BYE4 73 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms