RNA–Protein interactions for RNA: ENST00000475955.1

SEMA3C-208, Transcript of semaphorin 3C, humanhuman

TSL 4

Gene SEMA3C, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-208ENST00000475955 C7orf65Q6ZTY9 151 aa5.44□□□□□ -1.54
SEMA3C-208ENST00000475955 TYMSOSQ8TAI1 123 aa5.43□□□□□ -1.54
SEMA3C-208ENST00000475955 A0A1B0GU69 56 aa5.4□□□□□ -1.54
SEMA3C-208ENST00000475955 SPINK7P58062 85 aa5.4□□□□□ -1.54
SEMA3C-208ENST00000475955 A8MU10 97 aa5.39□□□□□ -1.55
SEMA3C-208ENST00000475955 LORP23490 312 aaPredicted RBP5.37□□□□□ -1.55
SEMA3C-208ENST00000475955 LINC00304Q8N9R0 145 aa5.37□□□□□ -1.55
SEMA3C-208ENST00000475955 RETNLBQ9BQ08 111 aa5.37□□□□□ -1.55
SEMA3C-208ENST00000475955 KRTAP16-1A8MUX0 517 aa5.36□□□□□ -1.55
SEMA3C-208ENST00000475955 SPINK1P00995 79 aa5.36□□□□□ -1.55
SEMA3C-208ENST00000475955 RPS29P62273 56 aaKnown RBP5.36□□□□□ -1.55
SEMA3C-208ENST00000475955 UQCR11O14957 56 aa5.35□□□□□ -1.55
SEMA3C-208ENST00000475955 IGKV2D-30A0A075B6S6 120 aa5.34□□□□□ -1.55
SEMA3C-208ENST00000475955 SPATA8Q6RVD6 105 aa5.34□□□□□ -1.55
SEMA3C-208ENST00000475955 RBM12B-AS1Q9P1G2 102 aa5.33□□□□□ -1.56
SEMA3C-208ENST00000475955 MUC2Q02817 5179 aa5.31□□□□□ -1.56
SEMA3C-208ENST00000475955 MIR22HGQ0VDD5 57 aa5.3□□□□□ -1.56
SEMA3C-208ENST00000475955 MUC17Q685J3 4493 aa5.28□□□□□ -1.56
SEMA3C-208ENST00000475955 TPRXLQ17RH7 258 aa5.27□□□□□ -1.57
SEMA3C-208ENST00000475955 FAT4Q6V0I7 4981 aa5.18□□□□□ -1.58
SEMA3C-208ENST00000475955 C20orf166-AS1Q96NR2 134 aa5.18□□□□□ -1.58
SEMA3C-208ENST00000475955 A8MUU9 505 aa5.17□□□□□ -1.58
SEMA3C-208ENST00000475955 KRTAP4-1Q9BYQ7 146 aa5.17□□□□□ -1.58
SEMA3C-208ENST00000475955 LINC01554Q52M75 96 aa5.11□□□□□ -1.59
SEMA3C-208ENST00000475955 XP32Q5T750 250 aa5.11□□□□□ -1.59
SEMA3C-208ENST00000475955 A0A1B0GU33 70 aa5.08□□□□□ -1.6
SEMA3C-208ENST00000475955 K7ERS5 55 aa5.08□□□□□ -1.6
SEMA3C-208ENST00000475955 SEC61BP60468 96 aaKnown RBP5.07□□□□□ -1.6
SEMA3C-208ENST00000475955 PRAC1Q96KF2 57 aa5.07□□□□□ -1.6
SEMA3C-208ENST00000475955 C9orf92A6NGG3 77 aa5.06□□□□□ -1.6
SEMA3C-208ENST00000475955 H1FX-AS1Q4G0G2 97 aa5.06□□□□□ -1.6
SEMA3C-208ENST00000475955 COX6B2Q6YFQ2 88 aa5.05□□□□□ -1.6
SEMA3C-208ENST00000475955 KRTAP9-2Q9BYQ4 174 aa5.04□□□□□ -1.6
SEMA3C-208ENST00000475955 KRTAP19-2Q3LHN2 52 aa5.03□□□□□ -1.6
SEMA3C-208ENST00000475955 ADM2Q7Z4H4 148 aa5.02□□□□□ -1.61
SEMA3C-208ENST00000475955 H0YAA0 97 aa5.01□□□□□ -1.61
SEMA3C-208ENST00000475955 CSAG1Q6PB30 78 aa5.01□□□□□ -1.61
SEMA3C-208ENST00000475955 LOC100996750A0A140TA64 210 aa4.99□□□□□ -1.61
SEMA3C-208ENST00000475955 KRTAP4-6Q9BYQ5 205 aa4.99□□□□□ -1.61
SEMA3C-208ENST00000475955 KRTAP3-1Q9BYR8 98 aa4.99□□□□□ -1.61
SEMA3C-208ENST00000475955 RPL37P61927 97 aaKnown RBP4.96□□□□□ -1.62
SEMA3C-208ENST00000475955 KRTAP25-1Q3LHN0 102 aa4.94□□□□□ -1.62
SEMA3C-208ENST00000475955 MT1HP80294 61 aa4.93□□□□□ -1.62
SEMA3C-208ENST00000475955 FLGP20930 4061 aaPredicted RBP4.88□□□□□ -1.63
SEMA3C-208ENST00000475955 ROMO1P60602 79 aa4.87□□□□□ -1.63
SEMA3C-208ENST00000475955 KRTAP9-6A0A140TA67 174 aa4.85□□□□□ -1.63
SEMA3C-208ENST00000475955 S4R3F8 94 aa4.85□□□□□ -1.63
SEMA3C-208ENST00000475955 KRTAP10-6P60371 365 aaPredicted RBP4.83□□□□□ -1.64
SEMA3C-208ENST00000475955 FSIP2Q5CZC0 6907 aa4.77□□□□□ -1.65
SEMA3C-208ENST00000475955 M0R2T5 61 aa4.76□□□□□ -1.65
SEMA3C-208ENST00000475955 CRCT1Q9UGL9 99 aa4.74□□□□□ -1.65
SEMA3C-208ENST00000475955 M0QZ58 72 aa4.72□□□□□ -1.65
SEMA3C-208ENST00000475955 A0A0D9SG42 100 aa4.7□□□□□ -1.66
SEMA3C-208ENST00000475955 CRIPTQ9P021 101 aa4.7□□□□□ -1.66
SEMA3C-208ENST00000475955 KRTAP13-4Q3LI77 160 aa4.68□□□□□ -1.66
SEMA3C-208ENST00000475955 KRTAP9-8Q9BYQ0 159 aa4.68□□□□□ -1.66
SEMA3C-208ENST00000475955 H3BS24 57 aa4.66□□□□□ -1.66
SEMA3C-208ENST00000475955 P0C880 135 aa4.66□□□□□ -1.66
SEMA3C-208ENST00000475955 KRTAP12-1P59990 96 aa4.61□□□□□ -1.67
SEMA3C-208ENST00000475955 SPINT4Q6UDR6 99 aa4.61□□□□□ -1.67
SEMA3C-208ENST00000475955 KRTAP4-8Q9BYQ9 185 aa4.61□□□□□ -1.67
SEMA3C-208ENST00000475955 MT2AP02795 61 aa4.6□□□□□ -1.67
SEMA3C-208ENST00000475955 MT1FP04733 61 aa4.58□□□□□ -1.68
SEMA3C-208ENST00000475955 KRTAP12-2P59991 146 aa4.58□□□□□ -1.68
SEMA3C-208ENST00000475955 USH2AO75445 5202 aa4.55□□□□□ -1.68
SEMA3C-208ENST00000475955 KRTAP9-3Q9BYQ3 159 aa4.53□□□□□ -1.68
SEMA3C-208ENST00000475955 SSPOA2VEC9 5147 aa4.52□□□□□ -1.69
SEMA3C-208ENST00000475955 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.5□□□□□ -1.69
SEMA3C-208ENST00000475955 KRTAP10-10P60014 251 aa4.5□□□□□ -1.69
SEMA3C-208ENST00000475955 R4GN34 69 aa4.5□□□□□ -1.69
SEMA3C-208ENST00000475955 C10orf95Q9H7T3 257 aa4.48□□□□□ -1.69
SEMA3C-208ENST00000475955 KRTAP15-1Q3LI76 137 aa4.47□□□□□ -1.69
SEMA3C-208ENST00000475955 KRTAP4-12Q9BQ66 201 aa4.44□□□□□ -1.7
SEMA3C-208ENST00000475955 KRTAP19-1Q8IUB9 90 aa4.43□□□□□ -1.7
SEMA3C-208ENST00000475955 FCGBPQ9Y6R7 5405 aaPredicted RBP4.41□□□□□ -1.7
SEMA3C-208ENST00000475955 PP632Q6XCG6 107 aa4.41□□□□□ -1.7
SEMA3C-208ENST00000475955 LCE3BQ5TA77 95 aa4.4□□□□□ -1.71
SEMA3C-208ENST00000475955 KRTAP9-7A8MTY7 169 aa4.36□□□□□ -1.71
SEMA3C-208ENST00000475955 NDUFAF8A1L188 74 aa4.35□□□□□ -1.71
SEMA3C-208ENST00000475955 KRTAP19-6Q3LI70 58 aa4.34□□□□□ -1.71
SEMA3C-208ENST00000475955 PLAC4Q8WY50 150 aa4.3□□□□□ -1.72
SEMA3C-208ENST00000475955 CAMK2N1Q7Z7J9 78 aa4.29□□□□□ -1.72
SEMA3C-208ENST00000475955 KRTAP9-9Q9BYP9 154 aa4.29□□□□□ -1.72
SEMA3C-208ENST00000475955 KRTAP9-4Q9BYQ2 154 aa4.29□□□□□ -1.72
SEMA3C-208ENST00000475955 MACF1Q9UPN3 7388 aaKnown RBP4.28□□□□□ -1.72
SEMA3C-208ENST00000475955 KRTAP23-1A1A580 65 aa4.27□□□□□ -1.73
SEMA3C-208ENST00000475955 SYNE2Q8WXH0 6885 aaKnown RBP4.25□□□□□ -1.73
SEMA3C-208ENST00000475955 KRTAP4-8A0A0G2JLE6 195 aa4.21□□□□□ -1.74
SEMA3C-208ENST00000475955 LUZP6Q538Z0 58 aa4.21□□□□□ -1.74
SEMA3C-208ENST00000475955 MT1BP07438 61 aa4.2□□□□□ -1.74
SEMA3C-208ENST00000475955 TNP1P09430 55 aa4.19□□□□□ -1.74
SEMA3C-208ENST00000475955 SPRR2GQ9BYE4 73 aa4.18□□□□□ -1.74
SEMA3C-208ENST00000475955 KRTAP19-8Q3LI54 63 aa4.17□□□□□ -1.74
SEMA3C-208ENST00000475955 KRTAP6-3Q3LI67 103 aa4.12□□□□□ -1.75
SEMA3C-208ENST00000475955 LCE1DQ5T752 114 aa4.12□□□□□ -1.75
SEMA3C-208ENST00000475955 KRTAP19-4Q3LI73 84 aa4.11□□□□□ -1.75
SEMA3C-208ENST00000475955 A0A0A0MQY5 61 aa4.08□□□□□ -1.76
SEMA3C-208ENST00000475955 KRTAP10-5P60370 271 aa4.08□□□□□ -1.76
SEMA3C-208ENST00000475955 KRTAP4-7Q9BYR0 210 aa4.06□□□□□ -1.76
SEMA3C-208ENST00000475955 LCE4AQ5TA78 99 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms