RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 KRTAP2-2Q9BYT5 123 aa6.6□□□□□ -1.35
ATG9A-220ENST00000475339 KRTAP2-1Q9BYU5 128 aa6.6□□□□□ -1.35
ATG9A-220ENST00000475339 H0Y9P7 68 aa6.59□□□□□ -1.35
ATG9A-220ENST00000475339 ATOX1O00244 68 aa6.59□□□□□ -1.35
ATG9A-220ENST00000475339 C1orf64Q8NEQ6 169 aa6.59□□□□□ -1.35
ATG9A-220ENST00000475339 CYP4F30PQ9H0H9 118 aa6.58□□□□□ -1.36
ATG9A-220ENST00000475339 S4R3F8 94 aa6.54□□□□□ -1.36
ATG9A-220ENST00000475339 K7ERU9 68 aa6.53□□□□□ -1.36
ATG9A-220ENST00000475339 KRTAP3-1Q9BYR8 98 aa6.52□□□□□ -1.37
ATG9A-220ENST00000475339 SCGB1A1P11684 91 aa6.51□□□□□ -1.37
ATG9A-220ENST00000475339 MP68P56378 58 aa6.51□□□□□ -1.37
ATG9A-220ENST00000475339 C5orf47Q569G3 176 aa6.5□□□□□ -1.37
ATG9A-220ENST00000475339 SPRR2EP22531 72 aa6.49□□□□□ -1.37
ATG9A-220ENST00000475339 SPRR2BP35325 72 aa6.49□□□□□ -1.37
ATG9A-220ENST00000475339 SPRR2AP35326 72 aa6.49□□□□□ -1.37
ATG9A-220ENST00000475339 LINC00208Q96KT6 92 aa6.49□□□□□ -1.37
ATG9A-220ENST00000475339 OCR1Q9BZK8 76 aa6.49□□□□□ -1.37
ATG9A-220ENST00000475339 LCA10Q71F78 164 aa6.46□□□□□ -1.38
ATG9A-220ENST00000475339 CSAG1Q6PB30 78 aa6.45□□□□□ -1.38
ATG9A-220ENST00000475339 IMUPQ9GZP8 106 aa6.44□□□□□ -1.38
ATG9A-220ENST00000475339 MT-ATP8P03928 68 aa6.43□□□□□ -1.38
ATG9A-220ENST00000475339 MT1BP07438 61 aa6.42□□□□□ -1.38
ATG9A-220ENST00000475339 KRTAP10-5P60370 271 aa6.42□□□□□ -1.38
ATG9A-220ENST00000475339 FAM236AA0A1B0GUQ0 79 aa6.41□□□□□ -1.38
ATG9A-220ENST00000475339 FAM236BA0A1B0GV22 79 aa6.41□□□□□ -1.38
ATG9A-220ENST00000475339 H3BPC8 53 aa6.41□□□□□ -1.38
ATG9A-220ENST00000475339 SPRR2FQ96RM1 72 aa6.4□□□□□ -1.38
ATG9A-220ENST00000475339 KLKP1Q107X0 134 aa6.39□□□□□ -1.39
ATG9A-220ENST00000475339 A8MUN3 132 aa6.38□□□□□ -1.39
ATG9A-220ENST00000475339 SMIM20Q8N5G0 67 aa6.35□□□□□ -1.39
ATG9A-220ENST00000475339 NDUFC1O43677 76 aa6.34□□□□□ -1.39
ATG9A-220ENST00000475339 Q5VV11 94 aa6.33□□□□□ -1.4
ATG9A-220ENST00000475339 KRTAP3-3Q9BYR6 98 aa6.33□□□□□ -1.4
ATG9A-220ENST00000475339 TRAV7A0A075B6U4 112 aa6.3□□□□□ -1.4
ATG9A-220ENST00000475339 LCE1AQ5T7P2 110 aa6.3□□□□□ -1.4
ATG9A-220ENST00000475339 SPRR2DP22532 72 aa6.28□□□□□ -1.4
ATG9A-220ENST00000475339 DMAC1Q96GE9 116 aa6.25□□□□□ -1.41
ATG9A-220ENST00000475339 KRTAP19-8Q3LI54 63 aa6.24□□□□□ -1.41
ATG9A-220ENST00000475339 H0YAA0 97 aa6.19□□□□□ -1.42
ATG9A-220ENST00000475339 LCE3BQ5TA77 95 aa6.18□□□□□ -1.42
ATG9A-220ENST00000475339 CRIPTQ9P021 101 aa6.17□□□□□ -1.42
ATG9A-220ENST00000475339 ADM2Q7Z4H4 148 aa6.16□□□□□ -1.42
ATG9A-220ENST00000475339 SPRR2GQ9BYE4 73 aa6.16□□□□□ -1.42
ATG9A-220ENST00000475339 SNURFQ9Y675 71 aa6.16□□□□□ -1.42
ATG9A-220ENST00000475339 SERP2Q8N6R1 65 aa6.15□□□□□ -1.42
ATG9A-220ENST00000475339 ACYP2P14621 99 aa6.14□□□□□ -1.43
ATG9A-220ENST00000475339 C20orf197Q8N268 126 aa6.13□□□□□ -1.43
ATG9A-220ENST00000475339 KRTAP8-1Q8IUC2 63 aa6.1□□□□□ -1.43
ATG9A-220ENST00000475339 DSTQ03001 7570 aaKnown RBP6.1□□□□□ -1.43
ATG9A-220ENST00000475339 CHKB-CPT1BH3BT56 60 aa6.09□□□□□ -1.43
ATG9A-220ENST00000475339 SPTSSBQ8NFR3 76 aa6.08□□□□□ -1.44
ATG9A-220ENST00000475339 SPANXA2-OT1Q8N9U9 137 aa6.05□□□□□ -1.44
ATG9A-220ENST00000475339 KRTAP4-9Q9BYQ8 210 aa6.01□□□□□ -1.45
ATG9A-220ENST00000475339 R4GN34 69 aa6.01□□□□□ -1.45
ATG9A-220ENST00000475339 P0C880 135 aa6□□□□□ -1.45
ATG9A-220ENST00000475339 COX7CP15954 63 aa6□□□□□ -1.45
ATG9A-220ENST00000475339 PCP4P48539 62 aa6□□□□□ -1.45
ATG9A-220ENST00000475339 M0QZ58 72 aa5.97□□□□□ -1.45
ATG9A-220ENST00000475339 KRTAP3-2Q9BYR7 98 aa5.95□□□□□ -1.46
ATG9A-220ENST00000475339 ANAPC13Q9BS18 74 aa5.92□□□□□ -1.46
ATG9A-220ENST00000475339 PLAC4Q8WY50 150 aa5.9□□□□□ -1.46
ATG9A-220ENST00000475339 LINC01554Q52M75 96 aa5.89□□□□□ -1.47
ATG9A-220ENST00000475339 COA5Q86WW8 74 aa5.89□□□□□ -1.47
ATG9A-220ENST00000475339 KRTAP4-8A0A0G2JLE6 195 aa5.87□□□□□ -1.47
ATG9A-220ENST00000475339 KRTAP4-8Q9BYQ9 185 aa5.87□□□□□ -1.47
ATG9A-220ENST00000475339 H7BZZ5 65 aa5.85□□□□□ -1.47
ATG9A-220ENST00000475339 CYSTM1Q9H1C7 97 aa5.84□□□□□ -1.47
ATG9A-220ENST00000475339 PRO2289Q9P1D8 64 aa5.83□□□□□ -1.48
ATG9A-220ENST00000475339 MT1XP80297 61 aa5.82□□□□□ -1.48
ATG9A-220ENST00000475339 KRTAP12-2P59991 146 aa5.79□□□□□ -1.48
ATG9A-220ENST00000475339 SEC61GP60059 68 aa5.78□□□□□ -1.48
ATG9A-220ENST00000475339 CCDC179H3BU77 68 aa5.75□□□□□ -1.49
ATG9A-220ENST00000475339 SERP1Q9Y6X1 66 aa5.75□□□□□ -1.49
ATG9A-220ENST00000475339 LCE1DQ5T752 114 aa5.74□□□□□ -1.49
ATG9A-220ENST00000475339 HMCN1Q96RW7 5635 aa5.74□□□□□ -1.49
ATG9A-220ENST00000475339 KRTAP5-10Q6L8G5 202 aa5.73□□□□□ -1.49
ATG9A-220ENST00000475339 AHNAK2Q8IVF2 5795 aa5.72□□□□□ -1.49
ATG9A-220ENST00000475339 ATP5EP56381 51 aaPredicted RBP5.68□□□□□ -1.5
ATG9A-220ENST00000475339 KRTAP13-4Q3LI77 160 aa5.66□□□□□ -1.5
ATG9A-220ENST00000475339 A0A1B0GU33 70 aa5.61□□□□□ -1.51
ATG9A-220ENST00000475339 A0A1B0GU69 56 aa5.61□□□□□ -1.51
ATG9A-220ENST00000475339 TMEM258P61165 79 aa5.61□□□□□ -1.51
ATG9A-220ENST00000475339 KRTAP5-7Q6L8G8 165 aa5.6□□□□□ -1.51
ATG9A-220ENST00000475339 MT4P47944 62 aa5.59□□□□□ -1.51
ATG9A-220ENST00000475339 A0A0D9SG42 100 aa5.58□□□□□ -1.52
ATG9A-220ENST00000475339 CAMK2N1Q7Z7J9 78 aa5.58□□□□□ -1.52
ATG9A-220ENST00000475339 SPATA8Q6RVD6 105 aa5.56□□□□□ -1.52
ATG9A-220ENST00000475339 KRTAP10-7P60409 375 aaPredicted RBP5.55□□□□□ -1.52
ATG9A-220ENST00000475339 PRR15LQ9BU68 103 aa5.53□□□□□ -1.52
ATG9A-220ENST00000475339 SPRR5A0A1B0GTR4 108 aa5.51□□□□□ -1.53
ATG9A-220ENST00000475339 KRTAP10-12P60413 245 aa5.49□□□□□ -1.53
ATG9A-220ENST00000475339 RPS28P62857 69 aaKnown RBP5.49□□□□□ -1.53
ATG9A-220ENST00000475339 SPINT4Q6UDR6 99 aa5.49□□□□□ -1.53
ATG9A-220ENST00000475339 SMIM26A0A096LP01 95 aa5.48□□□□□ -1.53
ATG9A-220ENST00000475339 LCE4AQ5TA78 99 aa5.47□□□□□ -1.53
ATG9A-220ENST00000475339 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
ATG9A-220ENST00000475339 LINC01558Q9Y6Z2 57 aa5.43□□□□□ -1.54
ATG9A-220ENST00000475339 KRTAP5-3Q6L8H2 238 aa5.42□□□□□ -1.54
ATG9A-220ENST00000475339 KRTAP12-1P59990 96 aa5.41□□□□□ -1.54
ATG9A-220ENST00000475339 A8MU10 97 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms