RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 CSAG1Q6PB30 78 aa11.77□□□□□ -0.52
SH3D21-202ENST00000474766 DMBT1Q9UGM3 2413 aaPredicted RBP11.76□□□□□ -0.53
SH3D21-202ENST00000474766 RPS29P62273 56 aaKnown RBP11.69□□□□□ -0.54
SH3D21-202ENST00000474766 J3QL48 77 aa11.69□□□□□ -0.54
SH3D21-202ENST00000474766 MT1HL1P0DM35 61 aa11.67□□□□□ -0.54
SH3D21-202ENST00000474766 HERC1Q15751 4861 aa11.67□□□□□ -0.54
SH3D21-202ENST00000474766 LINC00304Q8N9R0 145 aa11.66□□□□□ -0.54
SH3D21-202ENST00000474766 TNXBP22105 4242 aa11.64□□□□□ -0.55
SH3D21-202ENST00000474766 A0A0A0MQY5 61 aa11.61□□□□□ -0.55
SH3D21-202ENST00000474766 ROMO1P60602 79 aa11.6□□□□□ -0.55
SH3D21-202ENST00000474766 A8MUU9 505 aa11.57□□□□□ -0.56
SH3D21-202ENST00000474766 KRTAP10-8P60410 259 aa11.56□□□□□ -0.56
SH3D21-202ENST00000474766 H0YAA0 97 aa11.52□□□□□ -0.57
SH3D21-202ENST00000474766 KRTAP25-1Q3LHN0 102 aa11.48□□□□□ -0.57
SH3D21-202ENST00000474766 A0A1B0GU33 70 aa11.42□□□□□ -0.58
SH3D21-202ENST00000474766 H1FX-AS1Q4G0G2 97 aa11.38□□□□□ -0.59
SH3D21-202ENST00000474766 C20orf166-AS1Q96NR2 134 aa11.38□□□□□ -0.59
SH3D21-202ENST00000474766 HMCN2Q8NDA2 5059 aa11.33□□□□□ -0.6
SH3D21-202ENST00000474766 C9orf92A6NGG3 77 aa11.33□□□□□ -0.6
SH3D21-202ENST00000474766 K7ERS5 55 aa11.25□□□□□ -0.61
SH3D21-202ENST00000474766 KRTAP3-1Q9BYR8 98 aa11.25□□□□□ -0.61
SH3D21-202ENST00000474766 P0C880 135 aa11.21□□□□□ -0.61
SH3D21-202ENST00000474766 COX6B2Q6YFQ2 88 aa11.1□□□□□ -0.63
SH3D21-202ENST00000474766 LRP2P98164 4655 aa11.08□□□□□ -0.64
SH3D21-202ENST00000474766 LPAP08519 4548 aa11.05□□□□□ -0.64
SH3D21-202ENST00000474766 UBR4Q5T4S7 5183 aa10.99□□□□□ -0.65
SH3D21-202ENST00000474766 RPL37P61927 97 aaKnown RBP10.95□□□□□ -0.66
SH3D21-202ENST00000474766 CRIPTQ9P021 101 aa10.94□□□□□ -0.66
SH3D21-202ENST00000474766 KRTAP10-6P60371 365 aaPredicted RBP10.85□□□□□ -0.67
SH3D21-202ENST00000474766 XP32Q5T750 250 aa10.84□□□□□ -0.67
SH3D21-202ENST00000474766 TPRXLQ17RH7 258 aa10.82□□□□□ -0.68
SH3D21-202ENST00000474766 NDUFAF8A1L188 74 aa10.78□□□□□ -0.68
SH3D21-202ENST00000474766 KRTAP3-3Q9BYR6 98 aa10.76□□□□□ -0.69
SH3D21-202ENST00000474766 KRTAP13-4Q3LI77 160 aa10.75□□□□□ -0.69
SH3D21-202ENST00000474766 KRTAP3-2Q9BYR7 98 aa10.74□□□□□ -0.69
SH3D21-202ENST00000474766 RNF213Q63HN8 5207 aa10.73□□□□□ -0.69
SH3D21-202ENST00000474766 SPINT4Q6UDR6 99 aa10.72□□□□□ -0.69
SH3D21-202ENST00000474766 A0A0D9SG42 100 aa10.67□□□□□ -0.7
SH3D21-202ENST00000474766 KRTAP15-1Q3LI76 137 aa10.66□□□□□ -0.7
SH3D21-202ENST00000474766 S4R3F8 94 aa10.61□□□□□ -0.71
SH3D21-202ENST00000474766 MUC17Q685J3 4493 aa10.6□□□□□ -0.71
SH3D21-202ENST00000474766 LUZP6Q538Z0 58 aa10.58□□□□□ -0.72
SH3D21-202ENST00000474766 MUC2Q02817 5179 aa10.57□□□□□ -0.72
SH3D21-202ENST00000474766 SEC61BP60468 96 aaKnown RBP10.54□□□□□ -0.72
SH3D21-202ENST00000474766 C10orf95Q9H7T3 257 aa10.53□□□□□ -0.72
SH3D21-202ENST00000474766 KRTAP12-2P59991 146 aa10.46□□□□□ -0.73
SH3D21-202ENST00000474766 KRTAP12-1P59990 96 aa10.41□□□□□ -0.74
SH3D21-202ENST00000474766 KRTAP4-1Q9BYQ7 146 aa10.4□□□□□ -0.75
SH3D21-202ENST00000474766 M0QZ58 72 aa10.32□□□□□ -0.76
SH3D21-202ENST00000474766 FAT4Q6V0I7 4981 aa10.24□□□□□ -0.77
SH3D21-202ENST00000474766 KRTAP19-2Q3LHN2 52 aa10.09□□□□□ -0.79
SH3D21-202ENST00000474766 LCE2AQ5TA79 106 aaPredicted RBP10.06□□□□□ -0.8
SH3D21-202ENST00000474766 LCE2CQ5TA81 110 aa10.05□□□□□ -0.8
SH3D21-202ENST00000474766 MT1HP80294 61 aa9.88□□□□□ -0.83
SH3D21-202ENST00000474766 PLAC4Q8WY50 150 aa9.88□□□□□ -0.83
SH3D21-202ENST00000474766 R4GN34 69 aa9.85□□□□□ -0.83
SH3D21-202ENST00000474766 FLGP20930 4061 aaPredicted RBP9.83□□□□□ -0.84
SH3D21-202ENST00000474766 CAMK2N1Q7Z7J9 78 aa9.76□□□□□ -0.85
SH3D21-202ENST00000474766 PP632Q6XCG6 107 aa9.71□□□□□ -0.86
SH3D21-202ENST00000474766 LORP23490 312 aaPredicted RBP9.68□□□□□ -0.86
SH3D21-202ENST00000474766 M0R2T5 61 aa9.67□□□□□ -0.86
SH3D21-202ENST00000474766 KRTAP9-2Q9BYQ4 174 aa9.49□□□□□ -0.89
SH3D21-202ENST00000474766 KRTAP9-8Q9BYQ0 159 aa9.41□□□□□ -0.9
SH3D21-202ENST00000474766 LCE2DQ5TA82 110 aaPredicted RBP9.38□□□□□ -0.91
SH3D21-202ENST00000474766 KRTAP23-1A1A580 65 aa9.34□□□□□ -0.91
SH3D21-202ENST00000474766 MT2AP02795 61 aa9.31□□□□□ -0.92
SH3D21-202ENST00000474766 PRO2289Q9P1D8 64 aa9.28□□□□□ -0.92
SH3D21-202ENST00000474766 MT1FP04733 61 aa9.25□□□□□ -0.93
SH3D21-202ENST00000474766 SPRR5A0A1B0GTR4 108 aa9.22□□□□□ -0.93
SH3D21-202ENST00000474766 TNP1P09430 55 aa9.18□□□□□ -0.94
SH3D21-202ENST00000474766 KRTAP10-10P60014 251 aa9.17□□□□□ -0.94
SH3D21-202ENST00000474766 FSIP2Q5CZC0 6907 aa9.1□□□□□ -0.95
SH3D21-202ENST00000474766 KRTAP9-3Q9BYQ3 159 aa9.1□□□□□ -0.95
SH3D21-202ENST00000474766 KRTAP9-6A0A140TA67 174 aa9.04□□□□□ -0.96
SH3D21-202ENST00000474766 SPRR2GQ9BYE4 73 aa9.04□□□□□ -0.96
SH3D21-202ENST00000474766 CRCT1Q9UGL9 99 aa9□□□□□ -0.97
SH3D21-202ENST00000474766 LCE2BO14633 110 aa9□□□□□ -0.97
SH3D21-202ENST00000474766 USH2AO75445 5202 aa8.99□□□□□ -0.97
SH3D21-202ENST00000474766 KRTAP19-1Q8IUB9 90 aa8.97□□□□□ -0.97
SH3D21-202ENST00000474766 INE1O15225 51 aa8.88□□□□□ -0.99
SH3D21-202ENST00000474766 SSPOA2VEC9 5147 aa8.84□□□□□ -0.99
SH3D21-202ENST00000474766 KRTAP19-8Q3LI54 63 aa8.67□□□□□ -1.02
SH3D21-202ENST00000474766 FCGBPQ9Y6R7 5405 aaPredicted RBP8.6□□□□□ -1.03
SH3D21-202ENST00000474766 MT1BP07438 61 aa8.59□□□□□ -1.03
SH3D21-202ENST00000474766 KRTAP19-6Q3LI70 58 aa8.59□□□□□ -1.03
SH3D21-202ENST00000474766 LCE3AQ5TA76 89 aa8.55□□□□□ -1.04
SH3D21-202ENST00000474766 KRTAP8-1Q8IUC2 63 aa8.46□□□□□ -1.06
SH3D21-202ENST00000474766 KRTAP10-5P60370 271 aa8.44□□□□□ -1.06
SH3D21-202ENST00000474766 MT1XP80297 61 aa8.43□□□□□ -1.06
SH3D21-202ENST00000474766 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.39□□□□□ -1.07
SH3D21-202ENST00000474766 MACF1Q9UPN3 7388 aaKnown RBP8.24□□□□□ -1.09
SH3D21-202ENST00000474766 KRTAP10-12P60413 245 aa8.18□□□□□ -1.1
SH3D21-202ENST00000474766 KRTAP9-7A8MTY7 169 aa8.17□□□□□ -1.1
SH3D21-202ENST00000474766 KRTAP12-3P60328 96 aa8.17□□□□□ -1.1
SH3D21-202ENST00000474766 KRTAP10-7P60409 375 aaPredicted RBP8.14□□□□□ -1.11
SH3D21-202ENST00000474766 SYNE2Q8WXH0 6885 aaKnown RBP8.07□□□□□ -1.12
SH3D21-202ENST00000474766 KRTAP6-3Q3LI67 103 aa7.92□□□□□ -1.14
SH3D21-202ENST00000474766 KMT2DO14686 5537 aa7.84□□□□□ -1.15
SH3D21-202ENST00000474766 KRTAP19-5Q3LI72 72 aa7.78□□□□□ -1.16
SH3D21-202ENST00000474766 LCE3CQ5T5A8 94 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms