RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 ANAPC13Q9BS18 74 aa5.09□□□□□ -1.59
COL8A1-206ENST00000474648 CYP4F30PQ9H0H9 118 aa5.09□□□□□ -1.59
COL8A1-206ENST00000474648 LOC101927531A0A1B0GV80 90 aa5.08□□□□□ -1.6
COL8A1-206ENST00000474648 MP68P56378 58 aa5.07□□□□□ -1.6
COL8A1-206ENST00000474648 C1orf64Q8NEQ6 169 aa5.07□□□□□ -1.6
COL8A1-206ENST00000474648 LINC00208Q96KT6 92 aa5.07□□□□□ -1.6
COL8A1-206ENST00000474648 FLGP20930 4061 aaPredicted RBP5.06□□□□□ -1.6
COL8A1-206ENST00000474648 H3BPC8 53 aa5.05□□□□□ -1.6
COL8A1-206ENST00000474648 SERP2Q8N6R1 65 aa5.05□□□□□ -1.6
COL8A1-206ENST00000474648 A0A0U1RQV1 116 aa5.02□□□□□ -1.61
COL8A1-206ENST00000474648 KLKP1Q107X0 134 aa5.02□□□□□ -1.61
COL8A1-206ENST00000474648 C4orf26Q17RF5 130 aa5.02□□□□□ -1.61
COL8A1-206ENST00000474648 RBM12B-AS1Q9P1G2 102 aa5.02□□□□□ -1.61
COL8A1-206ENST00000474648 KRTAP5-3Q6L8H2 238 aa5□□□□□ -1.61
COL8A1-206ENST00000474648 COX7CP15954 63 aa4.99□□□□□ -1.61
COL8A1-206ENST00000474648 COX6B2Q6YFQ2 88 aa4.99□□□□□ -1.61
COL8A1-206ENST00000474648 FAM236DA0A1B0GTK5 79 aa4.97□□□□□ -1.61
COL8A1-206ENST00000474648 FAM236CP0DP71 79 aa4.97□□□□□ -1.61
COL8A1-206ENST00000474648 C20orf197Q8N268 126 aa4.97□□□□□ -1.61
COL8A1-206ENST00000474648 SNURFQ9Y675 71 aa4.97□□□□□ -1.61
COL8A1-206ENST00000474648 MT1HP80294 61 aa4.96□□□□□ -1.62
COL8A1-206ENST00000474648 H1FX-AS1Q4G0G2 97 aa4.95□□□□□ -1.62
COL8A1-206ENST00000474648 CCDC179H3BU77 68 aa4.9□□□□□ -1.63
COL8A1-206ENST00000474648 CYSTM1Q9H1C7 97 aa4.9□□□□□ -1.63
COL8A1-206ENST00000474648 A8MUN3 132 aa4.87□□□□□ -1.63
COL8A1-206ENST00000474648 DMAC1Q96GE9 116 aa4.86□□□□□ -1.63
COL8A1-206ENST00000474648 KRTAP9-8Q9BYQ0 159 aa4.86□□□□□ -1.63
COL8A1-206ENST00000474648 H7BZZ5 65 aa4.85□□□□□ -1.63
COL8A1-206ENST00000474648 NDUFC1O43677 76 aa4.85□□□□□ -1.63
COL8A1-206ENST00000474648 SPANXA2-OT1Q8N9U9 137 aa4.85□□□□□ -1.63
COL8A1-206ENST00000474648 M0R2T5 61 aa4.84□□□□□ -1.63
COL8A1-206ENST00000474648 LCA10Q71F78 164 aa4.83□□□□□ -1.64
COL8A1-206ENST00000474648 S4R3F8 94 aa4.83□□□□□ -1.64
COL8A1-206ENST00000474648 TMEM258P61165 79 aa4.82□□□□□ -1.64
COL8A1-206ENST00000474648 KRTAP10-6P60371 365 aaPredicted RBP4.81□□□□□ -1.64
COL8A1-206ENST00000474648 ACYP2P14621 99 aa4.79□□□□□ -1.64
COL8A1-206ENST00000474648 RPS28P62857 69 aaKnown RBP4.78□□□□□ -1.64
COL8A1-206ENST00000474648 CSAG1Q6PB30 78 aa4.76□□□□□ -1.65
COL8A1-206ENST00000474648 ATP5EP56381 51 aaPredicted RBP4.73□□□□□ -1.65
COL8A1-206ENST00000474648 MT2AP02795 61 aa4.72□□□□□ -1.65
COL8A1-206ENST00000474648 COA5Q86WW8 74 aa4.7□□□□□ -1.66
COL8A1-206ENST00000474648 SVIPQ8NHG7 77 aa4.7□□□□□ -1.66
COL8A1-206ENST00000474648 CHKB-CPT1BH3BT56 60 aa4.68□□□□□ -1.66
COL8A1-206ENST00000474648 MT1FP04733 61 aa4.68□□□□□ -1.66
COL8A1-206ENST00000474648 SERP1Q9Y6X1 66 aa4.66□□□□□ -1.66
COL8A1-206ENST00000474648 H0YAA0 97 aa4.64□□□□□ -1.67
COL8A1-206ENST00000474648 KRTAP10-10P60014 251 aa4.64□□□□□ -1.67
COL8A1-206ENST00000474648 SPTSSBQ8NFR3 76 aa4.63□□□□□ -1.67
COL8A1-206ENST00000474648 ADM2Q7Z4H4 148 aa4.6□□□□□ -1.67
COL8A1-206ENST00000474648 SMIM26A0A096LP01 95 aa4.58□□□□□ -1.68
COL8A1-206ENST00000474648 USH2AO75445 5202 aa4.57□□□□□ -1.68
COL8A1-206ENST00000474648 P0C880 135 aa4.56□□□□□ -1.68
COL8A1-206ENST00000474648 CRIPTQ9P021 101 aa4.51□□□□□ -1.69
COL8A1-206ENST00000474648 LCE1AQ5T7P2 110 aa4.5□□□□□ -1.69
COL8A1-206ENST00000474648 SPRR2GQ9BYE4 73 aa4.5□□□□□ -1.69
COL8A1-206ENST00000474648 LINC01558Q9Y6Z2 57 aa4.46□□□□□ -1.7
COL8A1-206ENST00000474648 V9GYY9 64 aa4.46□□□□□ -1.7
COL8A1-206ENST00000474648 SSPOA2VEC9 5147 aa4.45□□□□□ -1.7
COL8A1-206ENST00000474648 SEC61GP60059 68 aa4.45□□□□□ -1.7
COL8A1-206ENST00000474648 A0A1B0GU69 56 aa4.43□□□□□ -1.7
COL8A1-206ENST00000474648 KRTAP19-8Q3LI54 63 aa4.43□□□□□ -1.7
COL8A1-206ENST00000474648 M0QZ58 72 aa4.42□□□□□ -1.7
COL8A1-206ENST00000474648 Q1T7F1 81 aa4.42□□□□□ -1.7
COL8A1-206ENST00000474648 PRO0628Q9UI54 55 aa4.42□□□□□ -1.7
COL8A1-206ENST00000474648 R4GN34 69 aa4.42□□□□□ -1.7
COL8A1-206ENST00000474648 KRTAP13-4Q3LI77 160 aa4.41□□□□□ -1.7
COL8A1-206ENST00000474648 FSIP2Q5CZC0 6907 aa4.41□□□□□ -1.7
COL8A1-206ENST00000474648 A0A1B0GU33 70 aa4.39□□□□□ -1.71
COL8A1-206ENST00000474648 MT1BP07438 61 aa4.39□□□□□ -1.71
COL8A1-206ENST00000474648 Q5VV11 94 aa4.36□□□□□ -1.71
COL8A1-206ENST00000474648 PRR15LQ9BU68 103 aa4.36□□□□□ -1.71
COL8A1-206ENST00000474648 SPATA8Q6RVD6 105 aa4.34□□□□□ -1.71
COL8A1-206ENST00000474648 LINC01554Q52M75 96 aa4.33□□□□□ -1.72
COL8A1-206ENST00000474648 BRK1Q8WUW1 75 aa4.33□□□□□ -1.72
COL8A1-206ENST00000474648 PSPHP1O15172 72 aa4.31□□□□□ -1.72
COL8A1-206ENST00000474648 CRCT1Q9UGL9 99 aa4.31□□□□□ -1.72
COL8A1-206ENST00000474648 KRTAP19-6Q3LI70 58 aa4.29□□□□□ -1.72
COL8A1-206ENST00000474648 A6NN06 94 aa4.28□□□□□ -1.72
COL8A1-206ENST00000474648 FCGBPQ9Y6R7 5405 aaPredicted RBP4.27□□□□□ -1.73
COL8A1-206ENST00000474648 A0A0D9SG42 100 aa4.26□□□□□ -1.73
COL8A1-206ENST00000474648 PLAC4Q8WY50 150 aa4.26□□□□□ -1.73
COL8A1-206ENST00000474648 A8MU10 97 aa4.25□□□□□ -1.73
COL8A1-206ENST00000474648 UQCR11O14957 56 aa4.25□□□□□ -1.73
COL8A1-206ENST00000474648 KRTAP12-1P59990 96 aa4.21□□□□□ -1.74
COL8A1-206ENST00000474648 KRTAP10-5P60370 271 aa4.21□□□□□ -1.74
COL8A1-206ENST00000474648 MIR22HGQ0VDD5 57 aa4.2□□□□□ -1.74
COL8A1-206ENST00000474648 A6NED7 52 aa4.19□□□□□ -1.74
COL8A1-206ENST00000474648 KRTAP12-2P59991 146 aa4.19□□□□□ -1.74
COL8A1-206ENST00000474648 MT1XP80297 61 aa4.19□□□□□ -1.74
COL8A1-206ENST00000474648 KRTAP2-2Q9BYT5 123 aa4.19□□□□□ -1.74
COL8A1-206ENST00000474648 SPINT4Q6UDR6 99 aa4.17□□□□□ -1.74
COL8A1-206ENST00000474648 CDC42SE1Q9NRR8 79 aa4.17□□□□□ -1.74
COL8A1-206ENST00000474648 A0A0A0MQY5 61 aa4.12□□□□□ -1.75
COL8A1-206ENST00000474648 PMAIP1Q13794 54 aa4.12□□□□□ -1.75
COL8A1-206ENST00000474648 CAMK2N1Q7Z7J9 78 aa4.11□□□□□ -1.75
COL8A1-206ENST00000474648 PRO2289Q9P1D8 64 aa4.11□□□□□ -1.75
COL8A1-206ENST00000474648 KTN1-AS1Q86SY8 53 aa4.05□□□□□ -1.76
COL8A1-206ENST00000474648 KRTAP10-7P60409 375 aaPredicted RBP4.01□□□□□ -1.77
COL8A1-206ENST00000474648 C10orf95Q9H7T3 257 aa4.01□□□□□ -1.77
COL8A1-206ENST00000474648 K7ERS5 55 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms