RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 H3BT86 120 aa3.34□□□□□ -1.87
VPS50-211ENST00000474412 KRTAP10-10P60014 251 aa3.33□□□□□ -1.88
VPS50-211ENST00000474412 Q8N9L7 120 aa3.33□□□□□ -1.88
VPS50-211ENST00000474412 TMEM254Q8TBM7 123 aa3.33□□□□□ -1.88
VPS50-211ENST00000474412 MRPL34Q9BQ48 92 aaKnown RBP3.33□□□□□ -1.88
VPS50-211ENST00000474412 PDE6GP18545 87 aa3.32□□□□□ -1.88
VPS50-211ENST00000474412 NREPQ16612 68 aa3.32□□□□□ -1.88
VPS50-211ENST00000474412 A0A1B0GW54 56 aa3.31□□□□□ -1.88
VPS50-211ENST00000474412 BPY2O14599 106 aa3.31□□□□□ -1.88
VPS50-211ENST00000474412 Q5W150 140 aa3.31□□□□□ -1.88
VPS50-211ENST00000474412 hDV103S1A0JD37 113 aa3.3□□□□□ -1.88
VPS50-211ENST00000474412 NDUFS5O43920 106 aa3.3□□□□□ -1.88
VPS50-211ENST00000474412 SPCS1Q9Y6A9 102 aa3.3□□□□□ -1.88
VPS50-211ENST00000474412 COL5A1-AS1Q5SY13 56 aa3.28□□□□□ -1.88
VPS50-211ENST00000474412 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.88
VPS50-211ENST00000474412 FCGBPQ9Y6R7 5405 aaPredicted RBP3.26□□□□□ -1.89
VPS50-211ENST00000474412 HCG22E2RYF7 251 aa3.26□□□□□ -1.89
VPS50-211ENST00000474412 CASC2Q6XLA1 102 aa3.25□□□□□ -1.89
VPS50-211ENST00000474412 C7orf65Q6ZTY9 151 aa3.25□□□□□ -1.89
VPS50-211ENST00000474412 LINC00846Q9NV44 126 aa3.25□□□□□ -1.89
VPS50-211ENST00000474412 K7EP34 96 aa3.24□□□□□ -1.89
VPS50-211ENST00000474412 H1FX-AS1Q4G0G2 97 aa3.24□□□□□ -1.89
VPS50-211ENST00000474412 K7ERU9 68 aa3.23□□□□□ -1.89
VPS50-211ENST00000474412 SCGB1A1P11684 91 aa3.23□□□□□ -1.89
VPS50-211ENST00000474412 C4orf26Q17RF5 130 aa3.23□□□□□ -1.89
VPS50-211ENST00000474412 KRTAP19-6Q3LI70 58 aa3.22□□□□□ -1.89
VPS50-211ENST00000474412 KRTAP5-2Q701N4 177 aa3.2□□□□□ -1.9
VPS50-211ENST00000474412 UBL5Q9BZL1 73 aa3.18□□□□□ -1.9
VPS50-211ENST00000474412 MACF1Q9UPN3 7388 aaKnown RBP3.18□□□□□ -1.9
VPS50-211ENST00000474412 ETDBQ3ZM63 59 aa3.17□□□□□ -1.9
VPS50-211ENST00000474412 C5orf47Q569G3 176 aa3.17□□□□□ -1.9
VPS50-211ENST00000474412 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
VPS50-211ENST00000474412 SYNE2Q8WXH0 6885 aaKnown RBP3.16□□□□□ -1.9
VPS50-211ENST00000474412 LCA10Q71F78 164 aa3.15□□□□□ -1.91
VPS50-211ENST00000474412 S4R3F8 94 aa3.15□□□□□ -1.91
VPS50-211ENST00000474412 A0A087WVE0 104 aa3.14□□□□□ -1.91
VPS50-211ENST00000474412 MT1BP07438 61 aa3.14□□□□□ -1.91
VPS50-211ENST00000474412 GTF2H5Q6ZYL4 71 aa3.14□□□□□ -1.91
VPS50-211ENST00000474412 C1orf64Q8NEQ6 169 aa3.14□□□□□ -1.91
VPS50-211ENST00000474412 FAM236AA0A1B0GUQ0 79 aa3.12□□□□□ -1.91
VPS50-211ENST00000474412 FAM236BA0A1B0GV22 79 aa3.12□□□□□ -1.91
VPS50-211ENST00000474412 F8W1H4 67 aa3.11□□□□□ -1.91
VPS50-211ENST00000474412 LCE1CQ5T751 118 aa3.11□□□□□ -1.91
VPS50-211ENST00000474412 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
VPS50-211ENST00000474412 J3QR89 54 aa3.1□□□□□ -1.91
VPS50-211ENST00000474412 PP632Q6XCG6 107 aa3.1□□□□□ -1.91
VPS50-211ENST00000474412 TRAV22A0A0B4J277 110 aa3.09□□□□□ -1.91
VPS50-211ENST00000474412 TP53AIP1Q9HCN2 124 aa3.09□□□□□ -1.91
VPS50-211ENST00000474412 KRTAP19-8Q3LI54 63 aa3.08□□□□□ -1.92
VPS50-211ENST00000474412 SPRR2GQ9BYE4 73 aa3.08□□□□□ -1.92
VPS50-211ENST00000474412 CYP4F30PQ9H0H9 118 aa3.08□□□□□ -1.92
VPS50-211ENST00000474412 CSAG1Q6PB30 78 aa3.07□□□□□ -1.92
VPS50-211ENST00000474412 KRTAP6-3Q3LI67 103 aa3.06□□□□□ -1.92
VPS50-211ENST00000474412 Q5VV11 94 aa3.06□□□□□ -1.92
VPS50-211ENST00000474412 H0Y9P7 68 aa3.05□□□□□ -1.92
VPS50-211ENST00000474412 HIST1H4AP62805 103 aaKnown RBP3.05□□□□□ -1.92
VPS50-211ENST00000474412 KLKP1Q107X0 134 aa3.05□□□□□ -1.92
VPS50-211ENST00000474412 LOC101927531A0A1B0GV80 90 aa3.04□□□□□ -1.92
VPS50-211ENST00000474412 FAM240AA0A1B0GVK7 77 aa3.04□□□□□ -1.92
VPS50-211ENST00000474412 A6NN06 94 aa3.04□□□□□ -1.92
VPS50-211ENST00000474412 SMIM20Q8N5G0 67 aa3.04□□□□□ -1.92
VPS50-211ENST00000474412 ATP5EP2Q5VTU8 51 aa3.03□□□□□ -1.92
VPS50-211ENST00000474412 ANAPC13Q9BS18 74 aa3.03□□□□□ -1.92
VPS50-211ENST00000474412 ACYP1P07311 99 aa3.02□□□□□ -1.93
VPS50-211ENST00000474412 UQCRQO14949 82 aa3□□□□□ -1.93
VPS50-211ENST00000474412 MT-ATP8P03928 68 aa3□□□□□ -1.93
VPS50-211ENST00000474412 LINC00643Q86TS7 51 aa2.98□□□□□ -1.93
VPS50-211ENST00000474412 LINC00208Q96KT6 92 aa2.98□□□□□ -1.93
VPS50-211ENST00000474412 CCDC179H3BU77 68 aa2.97□□□□□ -1.93
VPS50-211ENST00000474412 ATOX1O00244 68 aa2.97□□□□□ -1.93
VPS50-211ENST00000474412 ADM2Q7Z4H4 148 aa2.96□□□□□ -1.94
VPS50-211ENST00000474412 H0YAA0 97 aa2.95□□□□□ -1.94
VPS50-211ENST00000474412 NDUFC1O43677 76 aa2.95□□□□□ -1.94
VPS50-211ENST00000474412 IMUPQ9GZP8 106 aa2.95□□□□□ -1.94
VPS50-211ENST00000474412 NEBP20929 6669 aa2.95□□□□□ -1.94
VPS50-211ENST00000474412 RPS28P62857 69 aaKnown RBP2.94□□□□□ -1.94
VPS50-211ENST00000474412 P0C880 135 aa2.93□□□□□ -1.94
VPS50-211ENST00000474412 CRIPTQ9P021 101 aa2.93□□□□□ -1.94
VPS50-211ENST00000474412 MUC12Q9UKN1 5478 aa2.93□□□□□ -1.94
VPS50-211ENST00000474412 A8MUN3 132 aa2.92□□□□□ -1.94
VPS50-211ENST00000474412 MT1XP80297 61 aa2.92□□□□□ -1.94
VPS50-211ENST00000474412 MP68P56378 58 aa2.9□□□□□ -1.95
VPS50-211ENST00000474412 DMAC1Q96GE9 116 aa2.9□□□□□ -1.95
VPS50-211ENST00000474412 KMT2DO14686 5537 aa2.9□□□□□ -1.95
VPS50-211ENST00000474412 M0QZ58 72 aa2.86□□□□□ -1.95
VPS50-211ENST00000474412 KRTAP20-1Q3LI63 56 aa2.86□□□□□ -1.95
VPS50-211ENST00000474412 H3BPC8 53 aa2.85□□□□□ -1.95
VPS50-211ENST00000474412 COX7CP15954 63 aa2.85□□□□□ -1.95
VPS50-211ENST00000474412 SEC61GP60059 68 aa2.85□□□□□ -1.95
VPS50-211ENST00000474412 SPRR2FQ96RM1 72 aa2.85□□□□□ -1.95
VPS50-211ENST00000474412 PRO0628Q9UI54 55 aa2.85□□□□□ -1.95
VPS50-211ENST00000474412 R4GN34 69 aa2.85□□□□□ -1.95
VPS50-211ENST00000474412 TMEM258P61165 79 aa2.84□□□□□ -1.95
VPS50-211ENST00000474412 SPRR5A0A1B0GTR4 108 aa2.83□□□□□ -1.96
VPS50-211ENST00000474412 LINC01554Q52M75 96 aa2.83□□□□□ -1.96
VPS50-211ENST00000474412 PRO2289Q9P1D8 64 aa2.82□□□□□ -1.96
VPS50-211ENST00000474412 V9GYY9 64 aa2.82□□□□□ -1.96
VPS50-211ENST00000474412 SPRR2EP22531 72 aa2.81□□□□□ -1.96
VPS50-211ENST00000474412 SPRR2BP35325 72 aa2.81□□□□□ -1.96
VPS50-211ENST00000474412 SPRR2AP35326 72 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms