RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 CSAG1Q6PB30 78 aa5.17□□□□□ -1.58
CKS1B-206ENST00000474215 CYP4F30PQ9H0H9 118 aa5.17□□□□□ -1.58
CKS1B-206ENST00000474215 ATP5EP2Q5VTU8 51 aa5.16□□□□□ -1.58
CKS1B-206ENST00000474215 LCA10Q71F78 164 aa5.16□□□□□ -1.58
CKS1B-206ENST00000474215 TRAV22A0A0B4J277 110 aa5.15□□□□□ -1.59
CKS1B-206ENST00000474215 HIST1H4AP62805 103 aaKnown RBP5.14□□□□□ -1.59
CKS1B-206ENST00000474215 LOC101927531A0A1B0GV80 90 aa5.13□□□□□ -1.59
CKS1B-206ENST00000474215 LCE5AQ5TCM9 118 aa5.13□□□□□ -1.59
CKS1B-206ENST00000474215 FAM236AA0A1B0GUQ0 79 aa5.12□□□□□ -1.59
CKS1B-206ENST00000474215 FAM236BA0A1B0GV22 79 aa5.12□□□□□ -1.59
CKS1B-206ENST00000474215 UQCRQO14949 82 aa5.11□□□□□ -1.59
CKS1B-206ENST00000474215 LINC00643Q86TS7 51 aa5.09□□□□□ -1.59
CKS1B-206ENST00000474215 ATOX1O00244 68 aa5.08□□□□□ -1.6
CKS1B-206ENST00000474215 H0Y9P7 68 aa5.07□□□□□ -1.6
CKS1B-206ENST00000474215 A0A087WVE0 104 aa5.06□□□□□ -1.6
CKS1B-206ENST00000474215 A0A1B0GV90 55 aa5.06□□□□□ -1.6
CKS1B-206ENST00000474215 SPRR2GQ9BYE4 73 aa5.05□□□□□ -1.6
CKS1B-206ENST00000474215 MACF1Q9UPN3 7388 aaKnown RBP5.03□□□□□ -1.6
CKS1B-206ENST00000474215 KLKP1Q107X0 134 aa5.03□□□□□ -1.6
CKS1B-206ENST00000474215 KRTAP19-8Q3LI54 63 aa5.01□□□□□ -1.61
CKS1B-206ENST00000474215 Q5VV11 94 aa5.01□□□□□ -1.61
CKS1B-206ENST00000474215 NDUFC1O43677 76 aa5□□□□□ -1.61
CKS1B-206ENST00000474215 MT1BP07438 61 aa5□□□□□ -1.61
CKS1B-206ENST00000474215 LINC00208Q96KT6 92 aa5□□□□□ -1.61
CKS1B-206ENST00000474215 OCR1Q9BZK8 76 aa4.99□□□□□ -1.61
CKS1B-206ENST00000474215 A8MUN3 132 aa4.98□□□□□ -1.61
CKS1B-206ENST00000474215 MP68P56378 58 aa4.98□□□□□ -1.61
CKS1B-206ENST00000474215 IMUPQ9GZP8 106 aa4.98□□□□□ -1.61
CKS1B-206ENST00000474215 CRIPTQ9P021 101 aa4.98□□□□□ -1.61
CKS1B-206ENST00000474215 SYNE2Q8WXH0 6885 aaKnown RBP4.98□□□□□ -1.61
CKS1B-206ENST00000474215 J3QR89 54 aa4.96□□□□□ -1.62
CKS1B-206ENST00000474215 A6NN06 94 aa4.95□□□□□ -1.62
CKS1B-206ENST00000474215 H0YAA0 97 aa4.94□□□□□ -1.62
CKS1B-206ENST00000474215 KRTAP6-3Q3LI67 103 aa4.92□□□□□ -1.62
CKS1B-206ENST00000474215 SVIPQ8NHG7 77 aa4.91□□□□□ -1.62
CKS1B-206ENST00000474215 H3BPC8 53 aa4.9□□□□□ -1.63
CKS1B-206ENST00000474215 SCGB1A1P11684 91 aa4.9□□□□□ -1.63
CKS1B-206ENST00000474215 KRTAP10-5P60370 271 aa4.9□□□□□ -1.63
CKS1B-206ENST00000474215 ADM2Q7Z4H4 148 aa4.88□□□□□ -1.63
CKS1B-206ENST00000474215 KRTAP5-3Q6L8H2 238 aa4.85□□□□□ -1.63
CKS1B-206ENST00000474215 DMAC1Q96GE9 116 aa4.83□□□□□ -1.64
CKS1B-206ENST00000474215 MT-ATP8P03928 68 aa4.78□□□□□ -1.64
CKS1B-206ENST00000474215 C20orf197Q8N268 126 aa4.78□□□□□ -1.64
CKS1B-206ENST00000474215 K7ERU9 68 aa4.77□□□□□ -1.65
CKS1B-206ENST00000474215 P0C880 135 aa4.77□□□□□ -1.65
CKS1B-206ENST00000474215 SMIM20Q8N5G0 67 aa4.77□□□□□ -1.65
CKS1B-206ENST00000474215 R4GN34 69 aa4.76□□□□□ -1.65
CKS1B-206ENST00000474215 TRAV7A0A075B6U4 112 aa4.75□□□□□ -1.65
CKS1B-206ENST00000474215 PLAC4Q8WY50 150 aa4.74□□□□□ -1.65
CKS1B-206ENST00000474215 ACYP2P14621 99 aa4.73□□□□□ -1.65
CKS1B-206ENST00000474215 M0QZ58 72 aa4.72□□□□□ -1.65
CKS1B-206ENST00000474215 PRO2289Q9P1D8 64 aa4.72□□□□□ -1.65
CKS1B-206ENST00000474215 KRTAP5-9P26371 169 aa4.7□□□□□ -1.66
CKS1B-206ENST00000474215 MT1XP80297 61 aa4.7□□□□□ -1.66
CKS1B-206ENST00000474215 NEBP20929 6669 aa4.68□□□□□ -1.66
CKS1B-206ENST00000474215 MUC12Q9UKN1 5478 aa4.68□□□□□ -1.66
CKS1B-206ENST00000474215 SPTSSBQ8NFR3 76 aa4.68□□□□□ -1.66
CKS1B-206ENST00000474215 KMT2DO14686 5537 aa4.65□□□□□ -1.66
CKS1B-206ENST00000474215 LINC01554Q52M75 96 aa4.65□□□□□ -1.67
CKS1B-206ENST00000474215 SNURFQ9Y675 71 aa4.64□□□□□ -1.67
CKS1B-206ENST00000474215 CHKB-CPT1BH3BT56 60 aa4.63□□□□□ -1.67
CKS1B-206ENST00000474215 MDN1Q9NU22 5596 aa4.61□□□□□ -1.67
CKS1B-206ENST00000474215 SPANXA2-OT1Q8N9U9 137 aa4.6□□□□□ -1.67
CKS1B-206ENST00000474215 KRTAP12-2P59991 146 aa4.59□□□□□ -1.67
CKS1B-206ENST00000474215 SERP2Q8N6R1 65 aa4.59□□□□□ -1.67
CKS1B-206ENST00000474215 SPRR2FQ96RM1 72 aa4.56□□□□□ -1.68
CKS1B-206ENST00000474215 KRTAP8-1Q8IUC2 63 aa4.55□□□□□ -1.68
CKS1B-206ENST00000474215 KRTAP20-1Q3LI63 56 aa4.54□□□□□ -1.68
CKS1B-206ENST00000474215 SPRR2EP22531 72 aa4.49□□□□□ -1.69
CKS1B-206ENST00000474215 SPRR2BP35325 72 aa4.49□□□□□ -1.69
CKS1B-206ENST00000474215 SPRR2AP35326 72 aa4.49□□□□□ -1.69
CKS1B-206ENST00000474215 KRTAP10-7P60409 375 aaPredicted RBP4.48□□□□□ -1.69
CKS1B-206ENST00000474215 KRTAP10-12P60413 245 aa4.47□□□□□ -1.69
CKS1B-206ENST00000474215 COA5Q86WW8 74 aa4.46□□□□□ -1.7
CKS1B-206ENST00000474215 KRTAP2-3P0C7H8 128 aa4.45□□□□□ -1.7
CKS1B-206ENST00000474215 KRTAP13-4Q3LI77 160 aa4.45□□□□□ -1.7
CKS1B-206ENST00000474215 KRTAP2-4Q9BYR9 128 aa4.45□□□□□ -1.7
CKS1B-206ENST00000474215 COX7CP15954 63 aa4.44□□□□□ -1.7
CKS1B-206ENST00000474215 LCE1AQ5T7P2 110 aa4.44□□□□□ -1.7
CKS1B-206ENST00000474215 SEC61GP60059 68 aa4.4□□□□□ -1.71
CKS1B-206ENST00000474215 CAMK2N1Q7Z7J9 78 aa4.39□□□□□ -1.71
CKS1B-206ENST00000474215 SERP1Q9Y6X1 66 aa4.39□□□□□ -1.71
CKS1B-206ENST00000474215 H7BZZ5 65 aa4.37□□□□□ -1.71
CKS1B-206ENST00000474215 CYSTM1Q9H1C7 97 aa4.37□□□□□ -1.71
CKS1B-206ENST00000474215 SPRR2DP22532 72 aa4.34□□□□□ -1.71
CKS1B-206ENST00000474215 A0A1B0GU33 70 aa4.33□□□□□ -1.72
CKS1B-206ENST00000474215 A0A0D9SG42 100 aa4.32□□□□□ -1.72
CKS1B-206ENST00000474215 SPATA8Q6RVD6 105 aa4.32□□□□□ -1.72
CKS1B-206ENST00000474215 KRTAP2-2Q9BYT5 123 aa4.31□□□□□ -1.72
CKS1B-206ENST00000474215 KRTAP2-1Q9BYU5 128 aa4.31□□□□□ -1.72
CKS1B-206ENST00000474215 ANAPC13Q9BS18 74 aa4.29□□□□□ -1.72
CKS1B-206ENST00000474215 SPINT4Q6UDR6 99 aa4.27□□□□□ -1.73
CKS1B-206ENST00000474215 A0A1B0GU69 56 aa4.25□□□□□ -1.73
CKS1B-206ENST00000474215 KRTAP12-1P59990 96 aa4.24□□□□□ -1.73
CKS1B-206ENST00000474215 PCP4P48539 62 aa4.23□□□□□ -1.73
CKS1B-206ENST00000474215 KRTAP15-1Q3LI76 137 aa4.21□□□□□ -1.74
CKS1B-206ENST00000474215 SMIM26A0A096LP01 95 aa4.2□□□□□ -1.74
CKS1B-206ENST00000474215 KRTAP23-1A1A580 65 aa4.2□□□□□ -1.74
CKS1B-206ENST00000474215 KRTAP19-7Q3SYF9 63 aa4.2□□□□□ -1.74
CKS1B-206ENST00000474215 CCDC179H3BU77 68 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms