RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 TPRXLQ17RH7 258 aa5.8□□□□□ -1.48
SP140-208ENST00000473711 ZCCHC13Q8WW36 166 aaKnown RBP5.8□□□□□ -1.48
SP140-208ENST00000473711 MP68P56378 58 aa5.78□□□□□ -1.48
SP140-208ENST00000473711 Q75L30 129 aa5.78□□□□□ -1.48
SP140-208ENST00000473711 TRAV22A0A0B4J277 110 aa5.77□□□□□ -1.49
SP140-208ENST00000473711 RPL37P61927 97 aaKnown RBP5.76□□□□□ -1.49
SP140-208ENST00000473711 LINC00208Q96KT6 92 aa5.76□□□□□ -1.49
SP140-208ENST00000473711 CYP4F30PQ9H0H9 118 aa5.76□□□□□ -1.49
SP140-208ENST00000473711 H3BPC8 53 aa5.75□□□□□ -1.49
SP140-208ENST00000473711 KRTAP15-1Q3LI76 137 aa5.75□□□□□ -1.49
SP140-208ENST00000473711 MPLKIPQ8TAP9 179 aa5.75□□□□□ -1.49
SP140-208ENST00000473711 C1orf64Q8NEQ6 169 aa5.74□□□□□ -1.49
SP140-208ENST00000473711 ATP11AUNQ6ZP68 121 aa5.73□□□□□ -1.49
SP140-208ENST00000473711 Q1T7F1 81 aa5.72□□□□□ -1.49
SP140-208ENST00000473711 BRK1Q8WUW1 75 aa5.72□□□□□ -1.49
SP140-208ENST00000473711 V9GYY9 64 aa5.71□□□□□ -1.5
SP140-208ENST00000473711 LRP2P98164 4655 aa5.7□□□□□ -1.5
SP140-208ENST00000473711 IGKV2D-30A0A075B6S6 120 aa5.69□□□□□ -1.5
SP140-208ENST00000473711 IGKV2-30P06310 120 aa5.69□□□□□ -1.5
SP140-208ENST00000473711 SPANXA2-OT1Q8N9U9 137 aa5.69□□□□□ -1.5
SP140-208ENST00000473711 KRTAP9-8Q9BYQ0 159 aa5.69□□□□□ -1.5
SP140-208ENST00000473711 LOC101927531A0A1B0GV80 90 aa5.68□□□□□ -1.5
SP140-208ENST00000473711 PCOTHQ58A44 107 aa5.68□□□□□ -1.5
SP140-208ENST00000473711 LPAP08519 4548 aa5.67□□□□□ -1.5
SP140-208ENST00000473711 FAT4Q6V0I7 4981 aa5.64□□□□□ -1.51
SP140-208ENST00000473711 SPINK7P58062 85 aa5.64□□□□□ -1.51
SP140-208ENST00000473711 SEC61BP60468 96 aaKnown RBP5.63□□□□□ -1.51
SP140-208ENST00000473711 C7orf65Q6ZTY9 151 aa5.63□□□□□ -1.51
SP140-208ENST00000473711 MUC2Q02817 5179 aa5.6□□□□□ -1.51
SP140-208ENST00000473711 HRES1P13985 223 aa5.58□□□□□ -1.52
SP140-208ENST00000473711 PSPHP1O15172 72 aa5.57□□□□□ -1.52
SP140-208ENST00000473711 A8MUN3 132 aa5.54□□□□□ -1.52
SP140-208ENST00000473711 MUC17Q685J3 4493 aa5.54□□□□□ -1.52
SP140-208ENST00000473711 KRTAP4-1Q9BYQ7 146 aa5.53□□□□□ -1.52
SP140-208ENST00000473711 Q5VV11 94 aa5.52□□□□□ -1.53
SP140-208ENST00000473711 COA5Q86WW8 74 aa5.52□□□□□ -1.53
SP140-208ENST00000473711 PRR15LQ9BU68 103 aa5.52□□□□□ -1.53
SP140-208ENST00000473711 CHKB-CPT1BH3BT56 60 aa5.5□□□□□ -1.53
SP140-208ENST00000473711 PMAIP1Q13794 54 aa5.48□□□□□ -1.53
SP140-208ENST00000473711 COX6B2Q6YFQ2 88 aa5.47□□□□□ -1.53
SP140-208ENST00000473711 DMAC1Q96GE9 116 aa5.45□□□□□ -1.54
SP140-208ENST00000473711 LINC01558Q9Y6Z2 57 aa5.45□□□□□ -1.54
SP140-208ENST00000473711 ACYP2P14621 99 aa5.44□□□□□ -1.54
SP140-208ENST00000473711 RBM12B-AS1Q9P1G2 102 aa5.44□□□□□ -1.54
SP140-208ENST00000473711 A6NED7 52 aa5.43□□□□□ -1.54
SP140-208ENST00000473711 FSIP2Q5CZC0 6907 aa5.41□□□□□ -1.54
SP140-208ENST00000473711 CDC42SE1Q9NRR8 79 aa5.4□□□□□ -1.54
SP140-208ENST00000473711 SEC61GP60059 68 aa5.39□□□□□ -1.55
SP140-208ENST00000473711 H1FX-AS1Q4G0G2 97 aa5.37□□□□□ -1.55
SP140-208ENST00000473711 LCA10Q71F78 164 aa5.36□□□□□ -1.55
SP140-208ENST00000473711 SPTSSBQ8NFR3 76 aa5.36□□□□□ -1.55
SP140-208ENST00000473711 KTN1-AS1Q86SY8 53 aa5.35□□□□□ -1.55
SP140-208ENST00000473711 KRTAP19-2Q3LHN2 52 aa5.34□□□□□ -1.55
SP140-208ENST00000473711 CRCT1Q9UGL9 99 aa5.34□□□□□ -1.55
SP140-208ENST00000473711 A8MU10 97 aa5.33□□□□□ -1.56
SP140-208ENST00000473711 A6NN06 94 aa5.31□□□□□ -1.56
SP140-208ENST00000473711 S4R3F8 94 aa5.31□□□□□ -1.56
SP140-208ENST00000473711 A0A1B0GU69 56 aa5.23□□□□□ -1.57
SP140-208ENST00000473711 CSAG1Q6PB30 78 aa5.21□□□□□ -1.58
SP140-208ENST00000473711 SPATA8Q6RVD6 105 aa5.18□□□□□ -1.58
SP140-208ENST00000473711 UQCR11O14957 56 aa5.16□□□□□ -1.58
SP140-208ENST00000473711 MT1HP80294 61 aa5.16□□□□□ -1.58
SP140-208ENST00000473711 FLGP20930 4061 aaPredicted RBP5.14□□□□□ -1.59
SP140-208ENST00000473711 MIR22HGQ0VDD5 57 aa5.14□□□□□ -1.59
SP140-208ENST00000473711 M0R2T5 61 aa5.13□□□□□ -1.59
SP140-208ENST00000473711 ADM2Q7Z4H4 148 aa5.08□□□□□ -1.6
SP140-208ENST00000473711 H0YAA0 97 aa5.04□□□□□ -1.6
SP140-208ENST00000473711 KRTAP10-6P60371 365 aaPredicted RBP5.04□□□□□ -1.6
SP140-208ENST00000473711 P0C880 135 aa5.03□□□□□ -1.6
SP140-208ENST00000473711 LCE1AQ5T7P2 110 aa5.02□□□□□ -1.61
SP140-208ENST00000473711 PRAC1Q96KF2 57 aa5□□□□□ -1.61
SP140-208ENST00000473711 A0A1B0GU33 70 aa4.98□□□□□ -1.61
SP140-208ENST00000473711 LINC01554Q52M75 96 aa4.95□□□□□ -1.62
SP140-208ENST00000473711 MT2AP02795 61 aa4.94□□□□□ -1.62
SP140-208ENST00000473711 MT1FP04733 61 aa4.91□□□□□ -1.62
SP140-208ENST00000473711 KRTAP10-10P60014 251 aa4.91□□□□□ -1.62
SP140-208ENST00000473711 KRTAP13-4Q3LI77 160 aa4.9□□□□□ -1.63
SP140-208ENST00000473711 M0QZ58 72 aa4.89□□□□□ -1.63
SP140-208ENST00000473711 R4GN34 69 aa4.88□□□□□ -1.63
SP140-208ENST00000473711 K7ERS5 55 aa4.87□□□□□ -1.63
SP140-208ENST00000473711 CRIPTQ9P021 101 aa4.86□□□□□ -1.63
SP140-208ENST00000473711 A0A0D9SG42 100 aa4.83□□□□□ -1.64
SP140-208ENST00000473711 KRTAP25-1Q3LHN0 102 aa4.79□□□□□ -1.64
SP140-208ENST00000473711 SSPOA2VEC9 5147 aa4.79□□□□□ -1.64
SP140-208ENST00000473711 SPRR2GQ9BYE4 73 aa4.78□□□□□ -1.64
SP140-208ENST00000473711 USH2AO75445 5202 aa4.76□□□□□ -1.65
SP140-208ENST00000473711 SYNE2Q8WXH0 6885 aaKnown RBP4.76□□□□□ -1.65
SP140-208ENST00000473711 FCGBPQ9Y6R7 5405 aaPredicted RBP4.75□□□□□ -1.65
SP140-208ENST00000473711 MACF1Q9UPN3 7388 aaKnown RBP4.73□□□□□ -1.65
SP140-208ENST00000473711 SPINT4Q6UDR6 99 aa4.72□□□□□ -1.65
SP140-208ENST00000473711 KRTAP12-1P59990 96 aa4.71□□□□□ -1.66
SP140-208ENST00000473711 ROMO1P60602 79 aa4.71□□□□□ -1.66
SP140-208ENST00000473711 KRTAP2-2Q9BYT5 123 aa4.7□□□□□ -1.66
SP140-208ENST00000473711 KRTAP12-2P59991 146 aa4.69□□□□□ -1.66
SP140-208ENST00000473711 KRTAP19-8Q3LI54 63 aa4.68□□□□□ -1.66
SP140-208ENST00000473711 KRTAP10-7P60409 375 aaPredicted RBP4.66□□□□□ -1.66
SP140-208ENST00000473711 PLAC4Q8WY50 150 aa4.64□□□□□ -1.67
SP140-208ENST00000473711 MT1BP07438 61 aa4.63□□□□□ -1.67
SP140-208ENST00000473711 CAMK2N1Q7Z7J9 78 aa4.58□□□□□ -1.68
SP140-208ENST00000473711 KRTAP5-11Q6L8G4 156 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms