RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 NOTCH2NLQ7Z3S9 236 aa8.3□□□□□ -1.08
LMNA-213ENST00000473598 MRPL34Q9BQ48 92 aaKnown RBP8.29□□□□□ -1.08
LMNA-213ENST00000473598 DMAC1Q96GE9 116 aa8.28□□□□□ -1.08
LMNA-213ENST00000473598 ROMO1P60602 79 aa8.27□□□□□ -1.09
LMNA-213ENST00000473598 KRTAP13-3Q3SY46 172 aa8.21□□□□□ -1.1
LMNA-213ENST00000473598 HMCN2Q8NDA2 5059 aa8.19□□□□□ -1.1
LMNA-213ENST00000473598 KRTAP25-1Q3LHN0 102 aa8.19□□□□□ -1.1
LMNA-213ENST00000473598 Q5W150 140 aa8.12□□□□□ -1.11
LMNA-213ENST00000473598 KRTAP16-1A8MUX0 517 aa8.11□□□□□ -1.11
LMNA-213ENST00000473598 C9orf92A6NGG3 77 aa8.09□□□□□ -1.11
LMNA-213ENST00000473598 LPAP08519 4548 aa8.07□□□□□ -1.12
LMNA-213ENST00000473598 A8MUU9 505 aa8.05□□□□□ -1.12
LMNA-213ENST00000473598 LRP2P98164 4655 aa8.04□□□□□ -1.12
LMNA-213ENST00000473598 UBR4Q5T4S7 5183 aa8□□□□□ -1.13
LMNA-213ENST00000473598 P0C880 135 aa8□□□□□ -1.13
LMNA-213ENST00000473598 C20orf166-AS1Q96NR2 134 aa8□□□□□ -1.13
LMNA-213ENST00000473598 IGKV2-30P06310 120 aa7.98□□□□□ -1.13
LMNA-213ENST00000473598 TPRXLQ17RH7 258 aa7.98□□□□□ -1.13
LMNA-213ENST00000473598 XP32Q5T750 250 aa7.95□□□□□ -1.14
LMNA-213ENST00000473598 RPL37P61927 97 aaKnown RBP7.88□□□□□ -1.15
LMNA-213ENST00000473598 IGKV2D-30A0A075B6S6 120 aa7.86□□□□□ -1.15
LMNA-213ENST00000473598 H0YAA0 97 aa7.86□□□□□ -1.15
LMNA-213ENST00000473598 RNF213Q63HN8 5207 aa7.84□□□□□ -1.15
LMNA-213ENST00000473598 A0A0A0MQY5 61 aa7.82□□□□□ -1.16
LMNA-213ENST00000473598 MUC2Q02817 5179 aa7.76□□□□□ -1.17
LMNA-213ENST00000473598 K7ERS5 55 aa7.76□□□□□ -1.17
LMNA-213ENST00000473598 A0A1B0GU33 70 aa7.73□□□□□ -1.17
LMNA-213ENST00000473598 SEC61BP60468 96 aaKnown RBP7.69□□□□□ -1.18
LMNA-213ENST00000473598 H1FX-AS1Q4G0G2 97 aa7.69□□□□□ -1.18
LMNA-213ENST00000473598 SPINT4Q6UDR6 99 aa7.69□□□□□ -1.18
LMNA-213ENST00000473598 MUC17Q685J3 4493 aa7.67□□□□□ -1.18
LMNA-213ENST00000473598 NDUFAF8A1L188 74 aa7.67□□□□□ -1.18
LMNA-213ENST00000473598 KRTAP15-1Q3LI76 137 aa7.65□□□□□ -1.18
LMNA-213ENST00000473598 CRIPTQ9P021 101 aa7.65□□□□□ -1.18
LMNA-213ENST00000473598 KRTAP4-1Q9BYQ7 146 aa7.57□□□□□ -1.2
LMNA-213ENST00000473598 KRTAP3-1Q9BYR8 98 aa7.55□□□□□ -1.2
LMNA-213ENST00000473598 COX6B2Q6YFQ2 88 aa7.49□□□□□ -1.21
LMNA-213ENST00000473598 FAT4Q6V0I7 4981 aa7.4□□□□□ -1.22
LMNA-213ENST00000473598 LUZP6Q538Z0 58 aa7.36□□□□□ -1.23
LMNA-213ENST00000473598 KRTAP19-2Q3LHN2 52 aa7.33□□□□□ -1.24
LMNA-213ENST00000473598 C10orf95Q9H7T3 257 aa7.31□□□□□ -1.24
LMNA-213ENST00000473598 LCE2CQ5TA81 110 aa7.28□□□□□ -1.24
LMNA-213ENST00000473598 S4R3F8 94 aa7.26□□□□□ -1.25
LMNA-213ENST00000473598 KRTAP3-3Q9BYR6 98 aa7.25□□□□□ -1.25
LMNA-213ENST00000473598 LCE2AQ5TA79 106 aaPredicted RBP7.24□□□□□ -1.25
LMNA-213ENST00000473598 KRTAP10-6P60371 365 aaPredicted RBP7.17□□□□□ -1.26
LMNA-213ENST00000473598 FLGP20930 4061 aaPredicted RBP7.16□□□□□ -1.26
LMNA-213ENST00000473598 MT1HP80294 61 aa7.16□□□□□ -1.26
LMNA-213ENST00000473598 KRTAP13-4Q3LI77 160 aa7.15□□□□□ -1.26
LMNA-213ENST00000473598 A0A0D9SG42 100 aa7.15□□□□□ -1.27
LMNA-213ENST00000473598 KRTAP3-2Q9BYR7 98 aa7.08□□□□□ -1.28
LMNA-213ENST00000473598 M0R2T5 61 aa7.03□□□□□ -1.28
LMNA-213ENST00000473598 KRTAP12-2P59991 146 aa7.01□□□□□ -1.29
LMNA-213ENST00000473598 KRTAP12-1P59990 96 aa6.95□□□□□ -1.3
LMNA-213ENST00000473598 LORP23490 312 aaPredicted RBP6.94□□□□□ -1.3
LMNA-213ENST00000473598 PLAC4Q8WY50 150 aa6.93□□□□□ -1.3
LMNA-213ENST00000473598 KRTAP9-2Q9BYQ4 174 aa6.93□□□□□ -1.3
LMNA-213ENST00000473598 KRTAP9-8Q9BYQ0 159 aa6.82□□□□□ -1.32
LMNA-213ENST00000473598 M0QZ58 72 aa6.79□□□□□ -1.32
LMNA-213ENST00000473598 FSIP2Q5CZC0 6907 aa6.79□□□□□ -1.32
LMNA-213ENST00000473598 MT2AP02795 61 aa6.76□□□□□ -1.33
LMNA-213ENST00000473598 MT1FP04733 61 aa6.72□□□□□ -1.33
LMNA-213ENST00000473598 LCE2DQ5TA82 110 aaPredicted RBP6.71□□□□□ -1.33
LMNA-213ENST00000473598 KRTAP9-6A0A140TA67 174 aa6.7□□□□□ -1.34
LMNA-213ENST00000473598 CAMK2N1Q7Z7J9 78 aa6.7□□□□□ -1.34
LMNA-213ENST00000473598 R4GN34 69 aa6.69□□□□□ -1.34
LMNA-213ENST00000473598 KRTAP10-10P60014 251 aa6.69□□□□□ -1.34
LMNA-213ENST00000473598 PP632Q6XCG6 107 aa6.6□□□□□ -1.35
LMNA-213ENST00000473598 KRTAP9-3Q9BYQ3 159 aa6.59□□□□□ -1.36
LMNA-213ENST00000473598 SPRR2GQ9BYE4 73 aa6.57□□□□□ -1.36
LMNA-213ENST00000473598 KRTAP19-1Q8IUB9 90 aa6.56□□□□□ -1.36
LMNA-213ENST00000473598 USH2AO75445 5202 aa6.55□□□□□ -1.36
LMNA-213ENST00000473598 LCE2BO14633 110 aa6.52□□□□□ -1.37
LMNA-213ENST00000473598 PRO2289Q9P1D8 64 aa6.51□□□□□ -1.37
LMNA-213ENST00000473598 CRCT1Q9UGL9 99 aa6.5□□□□□ -1.37
LMNA-213ENST00000473598 SSPOA2VEC9 5147 aa6.42□□□□□ -1.38
LMNA-213ENST00000473598 SPRR5A0A1B0GTR4 108 aa6.42□□□□□ -1.38
LMNA-213ENST00000473598 KRTAP19-8Q3LI54 63 aa6.41□□□□□ -1.38
LMNA-213ENST00000473598 MT1BP07438 61 aa6.33□□□□□ -1.4
LMNA-213ENST00000473598 INE1O15225 51 aa6.3□□□□□ -1.4
LMNA-213ENST00000473598 KRTAP23-1A1A580 65 aa6.25□□□□□ -1.41
LMNA-213ENST00000473598 FCGBPQ9Y6R7 5405 aaPredicted RBP6.24□□□□□ -1.41
LMNA-213ENST00000473598 KRTAP19-6Q3LI70 58 aa6.19□□□□□ -1.42
LMNA-213ENST00000473598 MT1XP80297 61 aa6.11□□□□□ -1.43
LMNA-213ENST00000473598 KRTAP10-5P60370 271 aa6.09□□□□□ -1.43
LMNA-213ENST00000473598 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.07□□□□□ -1.44
LMNA-213ENST00000473598 TNP1P09430 55 aa6.04□□□□□ -1.44
LMNA-213ENST00000473598 KRTAP9-7A8MTY7 169 aa6.01□□□□□ -1.45
LMNA-213ENST00000473598 SYNE2Q8WXH0 6885 aaKnown RBP5.99□□□□□ -1.45
LMNA-213ENST00000473598 MACF1Q9UPN3 7388 aaKnown RBP5.99□□□□□ -1.45
LMNA-213ENST00000473598 KRTAP10-7P60409 375 aaPredicted RBP5.86□□□□□ -1.47
LMNA-213ENST00000473598 KRTAP10-12P60413 245 aa5.79□□□□□ -1.48
LMNA-213ENST00000473598 KMT2DO14686 5537 aa5.79□□□□□ -1.48
LMNA-213ENST00000473598 LCE3AQ5TA76 89 aa5.74□□□□□ -1.49
LMNA-213ENST00000473598 KRTAP6-3Q3LI67 103 aa5.67□□□□□ -1.5
LMNA-213ENST00000473598 KRTAP4-8A0A0G2JLE6 195 aa5.65□□□□□ -1.5
LMNA-213ENST00000473598 KRTAP4-8Q9BYQ9 185 aa5.65□□□□□ -1.5
LMNA-213ENST00000473598 KRTAP8-1Q8IUC2 63 aa5.64□□□□□ -1.51
LMNA-213ENST00000473598 MUC12Q9UKN1 5478 aa5.6□□□□□ -1.51
LMNA-213ENST00000473598 KRTAP5-9P26371 169 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms