RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 KRTAP6-3Q3LI67 103 aa7.53□□□□□ -1.2
USP40-212ENST00000473191 OCR1Q9BZK8 76 aa7.5□□□□□ -1.21
USP40-212ENST00000473191 TRAV7A0A075B6U4 112 aa7.49□□□□□ -1.21
USP40-212ENST00000473191 UQCRQO14949 82 aa7.49□□□□□ -1.21
USP40-212ENST00000473191 KRTAP3-3Q9BYR6 98 aa7.49□□□□□ -1.21
USP40-212ENST00000473191 CSAG1Q6PB30 78 aa7.48□□□□□ -1.21
USP40-212ENST00000473191 ANAPC13Q9BS18 74 aa7.48□□□□□ -1.21
USP40-212ENST00000473191 SPRR2GQ9BYE4 73 aa7.47□□□□□ -1.21
USP40-212ENST00000473191 KRTAP19-8Q3LI54 63 aa7.46□□□□□ -1.22
USP40-212ENST00000473191 TRAV22A0A0B4J277 110 aa7.45□□□□□ -1.22
USP40-212ENST00000473191 SERP2Q8N6R1 65 aa7.45□□□□□ -1.22
USP40-212ENST00000473191 A6NN06 94 aa7.43□□□□□ -1.22
USP40-212ENST00000473191 H0Y9P7 68 aa7.43□□□□□ -1.22
USP40-212ENST00000473191 MP68P56378 58 aa7.43□□□□□ -1.22
USP40-212ENST00000473191 Q5VV11 94 aa7.43□□□□□ -1.22
USP40-212ENST00000473191 CYP4F30PQ9H0H9 118 aa7.43□□□□□ -1.22
USP40-212ENST00000473191 COX7CP15954 63 aa7.39□□□□□ -1.23
USP40-212ENST00000473191 KLKP1Q107X0 134 aa7.39□□□□□ -1.23
USP40-212ENST00000473191 H3BPC8 53 aa7.36□□□□□ -1.23
USP40-212ENST00000473191 LINC00208Q96KT6 92 aa7.36□□□□□ -1.23
USP40-212ENST00000473191 KRTAP10-5P60370 271 aa7.35□□□□□ -1.23
USP40-212ENST00000473191 LOC101927531A0A1B0GV80 90 aa7.34□□□□□ -1.23
USP40-212ENST00000473191 C20orf197Q8N268 126 aa7.34□□□□□ -1.23
USP40-212ENST00000473191 MUC12Q9UKN1 5478 aa7.33□□□□□ -1.24
USP40-212ENST00000473191 NEBP20929 6669 aa7.29□□□□□ -1.24
USP40-212ENST00000473191 SNURFQ9Y675 71 aa7.29□□□□□ -1.24
USP40-212ENST00000473191 PCP4P48539 62 aa7.27□□□□□ -1.25
USP40-212ENST00000473191 CCDC179H3BU77 68 aa7.26□□□□□ -1.25
USP40-212ENST00000473191 NDUFC1O43677 76 aa7.2□□□□□ -1.26
USP40-212ENST00000473191 CRIPTQ9P021 101 aa7.19□□□□□ -1.26
USP40-212ENST00000473191 KRTAP5-9P26371 169 aa7.15□□□□□ -1.26
USP40-212ENST00000473191 H0YAA0 97 aa7.14□□□□□ -1.27
USP40-212ENST00000473191 CYSTM1Q9H1C7 97 aa7.14□□□□□ -1.27
USP40-212ENST00000473191 ADM2Q7Z4H4 148 aa7.13□□□□□ -1.27
USP40-212ENST00000473191 H7BZZ5 65 aa7.12□□□□□ -1.27
USP40-212ENST00000473191 KMT2DO14686 5537 aa7.11□□□□□ -1.27
USP40-212ENST00000473191 SPANXA2-OT1Q8N9U9 137 aa7.08□□□□□ -1.28
USP40-212ENST00000473191 MDN1Q9NU22 5596 aa7.06□□□□□ -1.28
USP40-212ENST00000473191 A8MUN3 132 aa7.06□□□□□ -1.28
USP40-212ENST00000473191 TMEM258P61165 79 aa7.06□□□□□ -1.28
USP40-212ENST00000473191 ATP5EP56381 51 aaPredicted RBP7.04□□□□□ -1.28
USP40-212ENST00000473191 MT1XP80297 61 aa7.04□□□□□ -1.28
USP40-212ENST00000473191 KRTAP20-1Q3LI63 56 aa7.04□□□□□ -1.28
USP40-212ENST00000473191 DMAC1Q96GE9 116 aa7.01□□□□□ -1.29
USP40-212ENST00000473191 P0C880 135 aa7□□□□□ -1.29
USP40-212ENST00000473191 ACYP2P14621 99 aa6.97□□□□□ -1.29
USP40-212ENST00000473191 SPRR2FQ96RM1 72 aa6.93□□□□□ -1.3
USP40-212ENST00000473191 KRTAP3-2Q9BYR7 98 aa6.92□□□□□ -1.3
USP40-212ENST00000473191 PLAC4Q8WY50 150 aa6.91□□□□□ -1.3
USP40-212ENST00000473191 CHKB-CPT1BH3BT56 60 aa6.9□□□□□ -1.3
USP40-212ENST00000473191 PRO2289Q9P1D8 64 aa6.9□□□□□ -1.3
USP40-212ENST00000473191 R4GN34 69 aa6.9□□□□□ -1.3
USP40-212ENST00000473191 M0QZ58 72 aa6.88□□□□□ -1.31
USP40-212ENST00000473191 COA5Q86WW8 74 aa6.88□□□□□ -1.31
USP40-212ENST00000473191 SPRR2EP22531 72 aa6.85□□□□□ -1.31
USP40-212ENST00000473191 SPRR2BP35325 72 aa6.85□□□□□ -1.31
USP40-212ENST00000473191 SPRR2AP35326 72 aa6.85□□□□□ -1.31
USP40-212ENST00000473191 KRTAP4-8A0A0G2JLE6 195 aa6.84□□□□□ -1.31
USP40-212ENST00000473191 KRTAP4-8Q9BYQ9 185 aa6.84□□□□□ -1.31
USP40-212ENST00000473191 KRTAP8-1Q8IUC2 63 aa6.83□□□□□ -1.32
USP40-212ENST00000473191 SERP1Q9Y6X1 66 aa6.83□□□□□ -1.32
USP40-212ENST00000473191 SPTSSBQ8NFR3 76 aa6.82□□□□□ -1.32
USP40-212ENST00000473191 KRTAP12-2P59991 146 aa6.81□□□□□ -1.32
USP40-212ENST00000473191 LINC01554Q52M75 96 aa6.81□□□□□ -1.32
USP40-212ENST00000473191 KRTAP2-3P0C7H8 128 aa6.8□□□□□ -1.32
USP40-212ENST00000473191 KRTAP2-4Q9BYR9 128 aa6.8□□□□□ -1.32
USP40-212ENST00000473191 LCE1AQ5T7P2 110 aa6.77□□□□□ -1.33
USP40-212ENST00000473191 KRTAP10-7P60409 375 aaPredicted RBP6.75□□□□□ -1.33
USP40-212ENST00000473191 RPS28P62857 69 aaKnown RBP6.69□□□□□ -1.34
USP40-212ENST00000473191 KRTAP10-12P60413 245 aa6.65□□□□□ -1.34
USP40-212ENST00000473191 SMIM26A0A096LP01 95 aa6.62□□□□□ -1.35
USP40-212ENST00000473191 SPRR2DP22532 72 aa6.61□□□□□ -1.35
USP40-212ENST00000473191 SEC61GP60059 68 aa6.59□□□□□ -1.35
USP40-212ENST00000473191 KRTAP2-2Q9BYT5 123 aa6.59□□□□□ -1.35
USP40-212ENST00000473191 KRTAP2-1Q9BYU5 128 aa6.59□□□□□ -1.35
USP40-212ENST00000473191 V9GYY9 64 aa6.57□□□□□ -1.36
USP40-212ENST00000473191 A0A1B0GU69 56 aa6.54□□□□□ -1.36
USP40-212ENST00000473191 PRR15LQ9BU68 103 aa6.54□□□□□ -1.36
USP40-212ENST00000473191 LINC01558Q9Y6Z2 57 aa6.54□□□□□ -1.36
USP40-212ENST00000473191 KRTAP13-4Q3LI77 160 aa6.52□□□□□ -1.37
USP40-212ENST00000473191 Q1T7F1 81 aa6.51□□□□□ -1.37
USP40-212ENST00000473191 LCE3BQ5TA77 95 aa6.46□□□□□ -1.38
USP40-212ENST00000473191 PSPHP1O15172 72 aa6.43□□□□□ -1.38
USP40-212ENST00000473191 A0A1B0GU33 70 aa6.37□□□□□ -1.39
USP40-212ENST00000473191 CAMK2N1Q7Z7J9 78 aa6.31□□□□□ -1.4
USP40-212ENST00000473191 UQCR11O14957 56 aa6.3□□□□□ -1.4
USP40-212ENST00000473191 KRTAP19-7Q3SYF9 63 aa6.3□□□□□ -1.4
USP40-212ENST00000473191 A6NED7 52 aa6.27□□□□□ -1.41
USP40-212ENST00000473191 SPATA8Q6RVD6 105 aa6.25□□□□□ -1.41
USP40-212ENST00000473191 A0A0D9SG42 100 aa6.24□□□□□ -1.41
USP40-212ENST00000473191 MT1EP04732 61 aa6.23□□□□□ -1.41
USP40-212ENST00000473191 LCE5AQ5TCM9 118 aa6.23□□□□□ -1.41
USP40-212ENST00000473191 MIR22HGQ0VDD5 57 aa6.21□□□□□ -1.42
USP40-212ENST00000473191 DSTQ03001 7570 aaKnown RBP6.21□□□□□ -1.42
USP40-212ENST00000473191 KRTAP19-3Q7Z4W3 81 aa6.18□□□□□ -1.42
USP40-212ENST00000473191 SPINT4Q6UDR6 99 aa6.14□□□□□ -1.43
USP40-212ENST00000473191 A8MU10 97 aa6.13□□□□□ -1.43
USP40-212ENST00000473191 KRTAP12-1P59990 96 aa6.12□□□□□ -1.43
USP40-212ENST00000473191 KRTAP4-9Q9BYQ8 210 aa6.11□□□□□ -1.43
USP40-212ENST00000473191 KRTAP19-5Q3LI72 72 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms