RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 MIR22HGQ0VDD5 57 aa5.65□□□□□ -1.51
APLF-204ENST00000471727 COX6B2Q6YFQ2 88 aa5.65□□□□□ -1.51
APLF-204ENST00000471727 TNXBP22105 4242 aa5.63□□□□□ -1.51
APLF-204ENST00000471727 RPL37P61927 97 aaKnown RBP5.63□□□□□ -1.51
APLF-204ENST00000471727 KTN1-AS1Q86SY8 53 aa5.63□□□□□ -1.51
APLF-204ENST00000471727 KRTAP3-1Q9BYR8 98 aa5.63□□□□□ -1.51
APLF-204ENST00000471727 FAT3Q8TDW7 4589 aa5.62□□□□□ -1.51
APLF-204ENST00000471727 HSPG2P98160 4391 aa5.61□□□□□ -1.51
APLF-204ENST00000471727 RYR1P21817 5038 aa5.59□□□□□ -1.51
APLF-204ENST00000471727 KRTAP4-12Q9BQ66 201 aa5.59□□□□□ -1.52
APLF-204ENST00000471727 LCE3BQ5TA77 95 aa5.57□□□□□ -1.52
APLF-204ENST00000471727 MT1HL1P0DM35 61 aa5.54□□□□□ -1.52
APLF-204ENST00000471727 LRP1Q07954 4544 aaKnown RBP5.52□□□□□ -1.53
APLF-204ENST00000471727 A0A1B0GU33 70 aa5.51□□□□□ -1.53
APLF-204ENST00000471727 RYR3Q15413 4870 aa5.49□□□□□ -1.53
APLF-204ENST00000471727 H1FX-AS1Q4G0G2 97 aa5.49□□□□□ -1.53
APLF-204ENST00000471727 TPRXLQ17RH7 258 aa5.48□□□□□ -1.53
APLF-204ENST00000471727 DMBT1Q9UGM3 2413 aaPredicted RBP5.47□□□□□ -1.53
APLF-204ENST00000471727 KRTAP17-1Q9BYP8 105 aa5.47□□□□□ -1.53
APLF-204ENST00000471727 KRTAP9-9Q9BYP9 154 aa5.44□□□□□ -1.54
APLF-204ENST00000471727 KRTAP9-4Q9BYQ2 154 aa5.44□□□□□ -1.54
APLF-204ENST00000471727 S4R3F8 94 aa5.44□□□□□ -1.54
APLF-204ENST00000471727 H0YAA0 97 aa5.43□□□□□ -1.54
APLF-204ENST00000471727 KRTAP19-1Q8IUB9 90 aa5.43□□□□□ -1.54
APLF-204ENST00000471727 KRTAP4-8A0A0G2JLE6 195 aa5.41□□□□□ -1.54
APLF-204ENST00000471727 RBM12B-AS1Q9P1G2 102 aa5.39□□□□□ -1.55
APLF-204ENST00000471727 KIAA1109Q2LD37 5005 aa5.39□□□□□ -1.55
APLF-204ENST00000471727 K7ERS5 55 aa5.38□□□□□ -1.55
APLF-204ENST00000471727 MYCBP2O75592 4640 aa5.34□□□□□ -1.56
APLF-204ENST00000471727 KRTAP10-6P60371 365 aaPredicted RBP5.34□□□□□ -1.56
APLF-204ENST00000471727 SEC61BP60468 96 aaKnown RBP5.3□□□□□ -1.56
APLF-204ENST00000471727 CSAG1Q6PB30 78 aa5.3□□□□□ -1.56
APLF-204ENST00000471727 PRAC1Q96KF2 57 aa5.29□□□□□ -1.56
APLF-204ENST00000471727 EPPK1P58107 5090 aaKnown RBP5.28□□□□□ -1.56
APLF-204ENST00000471727 ADM2Q7Z4H4 148 aa5.27□□□□□ -1.57
APLF-204ENST00000471727 KRTAP4-5Q9BYR2 181 aa5.26□□□□□ -1.57
APLF-204ENST00000471727 KRTAP4-7Q9BYR0 210 aa5.24□□□□□ -1.57
APLF-204ENST00000471727 LCE1DQ5T752 114 aa5.23□□□□□ -1.57
APLF-204ENST00000471727 P0C880 135 aa5.21□□□□□ -1.58
APLF-204ENST00000471727 M0QZ58 72 aa5.2□□□□□ -1.58
APLF-204ENST00000471727 KRTAP13-4Q3LI77 160 aa5.2□□□□□ -1.58
APLF-204ENST00000471727 LRP2P98164 4655 aa5.19□□□□□ -1.58
APLF-204ENST00000471727 LINC01554Q52M75 96 aa5.18□□□□□ -1.58
APLF-204ENST00000471727 ROMO1P60602 79 aa5.17□□□□□ -1.58
APLF-204ENST00000471727 A0A0D9SG42 100 aa5.15□□□□□ -1.58
APLF-204ENST00000471727 KRTAP25-1Q3LHN0 102 aa5.15□□□□□ -1.59
APLF-204ENST00000471727 ABCA13Q86UQ4 5058 aa5.11□□□□□ -1.59
APLF-204ENST00000471727 LPAP08519 4548 aa5.11□□□□□ -1.59
APLF-204ENST00000471727 KRTAP4-9Q9BYQ8 210 aa5.1□□□□□ -1.59
APLF-204ENST00000471727 MUC17Q685J3 4493 aa5.08□□□□□ -1.6
APLF-204ENST00000471727 HERC2O95714 4834 aa5.08□□□□□ -1.6
APLF-204ENST00000471727 KRTAP12-1P59990 96 aa5.06□□□□□ -1.6
APLF-204ENST00000471727 BIRC6Q9NR09 4857 aa5.06□□□□□ -1.6
APLF-204ENST00000471727 KRTAP12-2P59991 146 aa5.05□□□□□ -1.6
APLF-204ENST00000471727 SPINT4Q6UDR6 99 aa5.05□□□□□ -1.6
APLF-204ENST00000471727 KRTAP4-1Q9BYQ7 146 aa5.05□□□□□ -1.6
APLF-204ENST00000471727 R4GN34 69 aa5.04□□□□□ -1.6
APLF-204ENST00000471727 KRTAP4-2Q9BYR5 136 aa5.01□□□□□ -1.61
APLF-204ENST00000471727 KRTAP19-2Q3LHN2 52 aa5□□□□□ -1.61
APLF-204ENST00000471727 CRIPTQ9P021 101 aa4.97□□□□□ -1.61
APLF-204ENST00000471727 FLGP20930 4061 aaPredicted RBP4.9□□□□□ -1.62
APLF-204ENST00000471727 KRTAP4-11Q9BYQ6 195 aa4.89□□□□□ -1.63
APLF-204ENST00000471727 KRTAP19-4Q3LI73 84 aa4.88□□□□□ -1.63
APLF-204ENST00000471727 LCE4AQ5TA78 99 aa4.85□□□□□ -1.63
APLF-204ENST00000471727 C10orf95Q9H7T3 257 aa4.83□□□□□ -1.64
APLF-204ENST00000471727 HERC1Q15751 4861 aa4.83□□□□□ -1.64
APLF-204ENST00000471727 HMCN2Q8NDA2 5059 aa4.81□□□□□ -1.64
APLF-204ENST00000471727 PCLOQ9Y6V0 5065 aa4.78□□□□□ -1.64
APLF-204ENST00000471727 CAMK2N1Q7Z7J9 78 aa4.76□□□□□ -1.65
APLF-204ENST00000471727 LCE5AQ5TCM9 118 aa4.75□□□□□ -1.65
APLF-204ENST00000471727 KRTAP9-7A8MTY7 169 aa4.73□□□□□ -1.65
APLF-204ENST00000471727 PP632Q6XCG6 107 aa4.72□□□□□ -1.65
APLF-204ENST00000471727 MUC2Q02817 5179 aa4.68□□□□□ -1.66
APLF-204ENST00000471727 SPRR2GQ9BYE4 73 aa4.66□□□□□ -1.66
APLF-204ENST00000471727 M0R2T5 61 aa4.65□□□□□ -1.66
APLF-204ENST00000471727 KRTAP15-1Q3LI76 137 aa4.64□□□□□ -1.67
APLF-204ENST00000471727 KRTAP5-3Q6L8H2 238 aa4.64□□□□□ -1.67
APLF-204ENST00000471727 KRTAP9-3Q9BYQ3 159 aa4.64□□□□□ -1.67
APLF-204ENST00000471727 KRTAP23-1A1A580 65 aa4.63□□□□□ -1.67
APLF-204ENST00000471727 MT1HP80294 61 aa4.63□□□□□ -1.67
APLF-204ENST00000471727 PLAC4Q8WY50 150 aa4.62□□□□□ -1.67
APLF-204ENST00000471727 TNP1P09430 55 aa4.61□□□□□ -1.67
APLF-204ENST00000471727 RNF213Q63HN8 5207 aa4.57□□□□□ -1.68
APLF-204ENST00000471727 MT2AP02795 61 aa4.54□□□□□ -1.68
APLF-204ENST00000471727 KRTAP10-10P60014 251 aa4.54□□□□□ -1.68
APLF-204ENST00000471727 KRTAP9-8Q9BYQ0 159 aa4.52□□□□□ -1.69
APLF-204ENST00000471727 MT1FP04733 61 aa4.5□□□□□ -1.69
APLF-204ENST00000471727 KRTAP19-8Q3LI54 63 aa4.49□□□□□ -1.69
APLF-204ENST00000471727 FAT4Q6V0I7 4981 aa4.47□□□□□ -1.69
APLF-204ENST00000471727 UBR4Q5T4S7 5183 aa4.47□□□□□ -1.69
APLF-204ENST00000471727 H3BS24 57 aa4.46□□□□□ -1.7
APLF-204ENST00000471727 NDUFAF8A1L188 74 aa4.42□□□□□ -1.7
APLF-204ENST00000471727 MT1BP07438 61 aa4.35□□□□□ -1.71
APLF-204ENST00000471727 LUZP6Q538Z0 58 aa4.35□□□□□ -1.71
APLF-204ENST00000471727 KRTAP10-5P60370 271 aa4.29□□□□□ -1.72
APLF-204ENST00000471727 MT1XP80297 61 aa4.28□□□□□ -1.72
APLF-204ENST00000471727 LCE3AQ5TA76 89 aa4.28□□□□□ -1.72
APLF-204ENST00000471727 PRO2289Q9P1D8 64 aa4.28□□□□□ -1.72
APLF-204ENST00000471727 SPRR5A0A1B0GTR4 108 aa4.27□□□□□ -1.73
APLF-204ENST00000471727 KRTAP8-1Q8IUC2 63 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms