RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 KRTAP3-1Q9BYR8 98 aa8.98□□□□□ -0.97
HSPG2-208ENST00000471322 SPTSSBQ8NFR3 76 aa8.94□□□□□ -0.98
HSPG2-208ENST00000471322 LINC01558Q9Y6Z2 57 aa8.94□□□□□ -0.98
HSPG2-208ENST00000471322 PSPHP1O15172 72 aa8.87□□□□□ -0.99
HSPG2-208ENST00000471322 RBM12B-AS1Q9P1G2 102 aa8.87□□□□□ -0.99
HSPG2-208ENST00000471322 PRR15LQ9BU68 103 aa8.86□□□□□ -0.99
HSPG2-208ENST00000471322 LCE2AQ5TA79 106 aaPredicted RBP8.83□□□□□ -1
HSPG2-208ENST00000471322 KRTAP19-2Q3LHN2 52 aa8.82□□□□□ -1
HSPG2-208ENST00000471322 LCE2CQ5TA81 110 aa8.8□□□□□ -1
HSPG2-208ENST00000471322 H1FX-AS1Q4G0G2 97 aa8.8□□□□□ -1
HSPG2-208ENST00000471322 Q5VV11 94 aa8.8□□□□□ -1
HSPG2-208ENST00000471322 A0A1B0GU69 56 aa8.76□□□□□ -1.01
HSPG2-208ENST00000471322 S4R3F8 94 aa8.75□□□□□ -1.01
HSPG2-208ENST00000471322 SEC61GP60059 68 aa8.72□□□□□ -1.01
HSPG2-208ENST00000471322 LCA10Q71F78 164 aa8.7□□□□□ -1.02
HSPG2-208ENST00000471322 MT1HP80294 61 aa8.68□□□□□ -1.02
HSPG2-208ENST00000471322 KRTAP3-3Q9BYR6 98 aa8.66□□□□□ -1.02
HSPG2-208ENST00000471322 FLGP20930 4061 aaPredicted RBP8.66□□□□□ -1.02
HSPG2-208ENST00000471322 A6NED7 52 aa8.63□□□□□ -1.03
HSPG2-208ENST00000471322 BRK1Q8WUW1 75 aa8.62□□□□□ -1.03
HSPG2-208ENST00000471322 M0R2T5 61 aa8.58□□□□□ -1.04
HSPG2-208ENST00000471322 CSAG1Q6PB30 78 aa8.57□□□□□ -1.04
HSPG2-208ENST00000471322 UQCR11O14957 56 aa8.54□□□□□ -1.04
HSPG2-208ENST00000471322 PRO0628Q9UI54 55 aa8.53□□□□□ -1.04
HSPG2-208ENST00000471322 CDC42SE1Q9NRR8 79 aa8.51□□□□□ -1.05
HSPG2-208ENST00000471322 A0A1B0GU33 70 aa8.46□□□□□ -1.06
HSPG2-208ENST00000471322 KRTAP10-6P60371 365 aaPredicted RBP8.46□□□□□ -1.06
HSPG2-208ENST00000471322 LORP23490 312 aaPredicted RBP8.43□□□□□ -1.06
HSPG2-208ENST00000471322 MIR22HGQ0VDD5 57 aa8.43□□□□□ -1.06
HSPG2-208ENST00000471322 SPATA8Q6RVD6 105 aa8.43□□□□□ -1.06
HSPG2-208ENST00000471322 KRTAP9-2Q9BYQ4 174 aa8.4□□□□□ -1.06
HSPG2-208ENST00000471322 H0YAA0 97 aa8.4□□□□□ -1.07
HSPG2-208ENST00000471322 KRTAP3-2Q9BYR7 98 aa8.4□□□□□ -1.07
HSPG2-208ENST00000471322 A8MU10 97 aa8.36□□□□□ -1.07
HSPG2-208ENST00000471322 ADM2Q7Z4H4 148 aa8.36□□□□□ -1.07
HSPG2-208ENST00000471322 FSIP2Q5CZC0 6907 aa8.31□□□□□ -1.08
HSPG2-208ENST00000471322 P0C880 135 aa8.29□□□□□ -1.08
HSPG2-208ENST00000471322 KRTAP9-8Q9BYQ0 159 aa8.25□□□□□ -1.09
HSPG2-208ENST00000471322 LCE2DQ5TA82 110 aaPredicted RBP8.24□□□□□ -1.09
HSPG2-208ENST00000471322 M0QZ58 72 aa8.19□□□□□ -1.1
HSPG2-208ENST00000471322 PMAIP1Q13794 54 aa8.18□□□□□ -1.1
HSPG2-208ENST00000471322 MT2AP02795 61 aa8.16□□□□□ -1.1
HSPG2-208ENST00000471322 KRTAP13-4Q3LI77 160 aa8.14□□□□□ -1.11
HSPG2-208ENST00000471322 MT1FP04733 61 aa8.11□□□□□ -1.11
HSPG2-208ENST00000471322 K7ERS5 55 aa8.1□□□□□ -1.11
HSPG2-208ENST00000471322 KRTAP10-10P60014 251 aa8.09□□□□□ -1.11
HSPG2-208ENST00000471322 A6NN06 94 aa8.08□□□□□ -1.12
HSPG2-208ENST00000471322 SVIPQ8NHG7 77 aa8.08□□□□□ -1.12
HSPG2-208ENST00000471322 R4GN34 69 aa8.07□□□□□ -1.12
HSPG2-208ENST00000471322 A0A0D9SG42 100 aa8.04□□□□□ -1.12
HSPG2-208ENST00000471322 CRIPTQ9P021 101 aa8.02□□□□□ -1.13
HSPG2-208ENST00000471322 KRTAP9-6A0A140TA67 174 aa8.01□□□□□ -1.13
HSPG2-208ENST00000471322 USH2AO75445 5202 aa8□□□□□ -1.13
HSPG2-208ENST00000471322 CRCT1Q9UGL9 99 aa7.97□□□□□ -1.13
HSPG2-208ENST00000471322 KRTAP9-3Q9BYQ3 159 aa7.96□□□□□ -1.13
HSPG2-208ENST00000471322 LCE2BO14633 110 aa7.91□□□□□ -1.14
HSPG2-208ENST00000471322 SSPOA2VEC9 5147 aa7.9□□□□□ -1.14
HSPG2-208ENST00000471322 KRTAP12-1P59990 96 aa7.89□□□□□ -1.15
HSPG2-208ENST00000471322 LINC01554Q52M75 96 aa7.89□□□□□ -1.15
HSPG2-208ENST00000471322 SPINT4Q6UDR6 99 aa7.88□□□□□ -1.15
HSPG2-208ENST00000471322 KTN1-AS1Q86SY8 53 aa7.87□□□□□ -1.15
HSPG2-208ENST00000471322 KRTAP12-2P59991 146 aa7.86□□□□□ -1.15
HSPG2-208ENST00000471322 SPRR2GQ9BYE4 73 aa7.74□□□□□ -1.17
HSPG2-208ENST00000471322 ROMO1P60602 79 aa7.73□□□□□ -1.17
HSPG2-208ENST00000471322 KRTAP19-1Q8IUB9 90 aa7.68□□□□□ -1.18
HSPG2-208ENST00000471322 FCGBPQ9Y6R7 5405 aaPredicted RBP7.66□□□□□ -1.18
HSPG2-208ENST00000471322 CAMK2N1Q7Z7J9 78 aa7.6□□□□□ -1.19
HSPG2-208ENST00000471322 PLAC4Q8WY50 150 aa7.57□□□□□ -1.2
HSPG2-208ENST00000471322 PRAC1Q96KF2 57 aa7.57□□□□□ -1.2
HSPG2-208ENST00000471322 KRTAP19-6Q3LI70 58 aa7.52□□□□□ -1.2
HSPG2-208ENST00000471322 KRTAP19-8Q3LI54 63 aa7.52□□□□□ -1.21
HSPG2-208ENST00000471322 MT1BP07438 61 aa7.5□□□□□ -1.21
HSPG2-208ENST00000471322 C10orf95Q9H7T3 257 aa7.45□□□□□ -1.22
HSPG2-208ENST00000471322 MACF1Q9UPN3 7388 aaKnown RBP7.43□□□□□ -1.22
HSPG2-208ENST00000471322 KRTAP25-1Q3LHN0 102 aa7.43□□□□□ -1.22
HSPG2-208ENST00000471322 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.41□□□□□ -1.22
HSPG2-208ENST00000471322 SYNE2Q8WXH0 6885 aaKnown RBP7.35□□□□□ -1.23
HSPG2-208ENST00000471322 TNP1P09430 55 aa7.26□□□□□ -1.25
HSPG2-208ENST00000471322 KRTAP9-7A8MTY7 169 aa7.24□□□□□ -1.25
HSPG2-208ENST00000471322 KRTAP10-5P60370 271 aa7.24□□□□□ -1.25
HSPG2-208ENST00000471322 PRO2289Q9P1D8 64 aa7.16□□□□□ -1.26
HSPG2-208ENST00000471322 MT1XP80297 61 aa7.16□□□□□ -1.26
HSPG2-208ENST00000471322 PP632Q6XCG6 107 aa7.16□□□□□ -1.26
HSPG2-208ENST00000471322 KRTAP23-1A1A580 65 aa7.12□□□□□ -1.27
HSPG2-208ENST00000471322 KMT2DO14686 5537 aa7.04□□□□□ -1.28
HSPG2-208ENST00000471322 KRTAP6-3Q3LI67 103 aa6.97□□□□□ -1.29
HSPG2-208ENST00000471322 MUC12Q9UKN1 5478 aa6.93□□□□□ -1.3
HSPG2-208ENST00000471322 KRTAP10-12P60413 245 aa6.87□□□□□ -1.31
HSPG2-208ENST00000471322 KRTAP10-7P60409 375 aaPredicted RBP6.86□□□□□ -1.31
HSPG2-208ENST00000471322 LCE3AQ5TA76 89 aa6.86□□□□□ -1.31
HSPG2-208ENST00000471322 MDN1Q9NU22 5596 aa6.8□□□□□ -1.32
HSPG2-208ENST00000471322 KRTAP4-8A0A0G2JLE6 195 aa6.76□□□□□ -1.33
HSPG2-208ENST00000471322 KRTAP8-1Q8IUC2 63 aa6.76□□□□□ -1.33
HSPG2-208ENST00000471322 KRTAP4-8Q9BYQ9 185 aa6.76□□□□□ -1.33
HSPG2-208ENST00000471322 NEBP20929 6669 aa6.75□□□□□ -1.33
HSPG2-208ENST00000471322 KRTAP5-9P26371 169 aa6.75□□□□□ -1.33
HSPG2-208ENST00000471322 SPRR2FQ96RM1 72 aa6.69□□□□□ -1.34
HSPG2-208ENST00000471322 KRTAP12-3P60328 96 aa6.62□□□□□ -1.35
HSPG2-208ENST00000471322 KRTAP15-1Q3LI76 137 aa6.58□□□□□ -1.36
HSPG2-208ENST00000471322 SPRR2EP22531 72 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms