RNA–Protein interactions for RNA: ENST00000470944.1

SOD1-203, Transcript of superoxide dismutase 1, humanhuman

TSL 2

Gene SOD1, Length 1,746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-203ENST00000470944 A8MUN3 132 aa14.06□□□□□ -0.16
SOD1-203ENST00000470944 DMAC1Q96GE9 116 aa14.04□□□□□ -0.16
SOD1-203ENST00000470944 S4R3F8 94 aa14□□□□□ -0.17
SOD1-203ENST00000470944 SPANXA2-OT1Q8N9U9 137 aa13.99□□□□□ -0.17
SOD1-203ENST00000470944 LCA10Q71F78 164 aa13.98□□□□□ -0.17
SOD1-203ENST00000470944 KRTAP10-6P60371 365 aaPredicted RBP13.9□□□□□ -0.18
SOD1-203ENST00000470944 KRTAP3-3Q9BYR6 98 aa13.9□□□□□ -0.18
SOD1-203ENST00000470944 LORP23490 312 aaPredicted RBP13.85□□□□□ -0.19
SOD1-203ENST00000470944 ACYP2P14621 99 aa13.84□□□□□ -0.19
SOD1-203ENST00000470944 SMIM26A0A096LP01 95 aa13.78□□□□□ -0.2
SOD1-203ENST00000470944 CSAG1Q6PB30 78 aa13.76□□□□□ -0.21
SOD1-203ENST00000470944 KRTAP9-8Q9BYQ0 159 aa13.72□□□□□ -0.21
SOD1-203ENST00000470944 CHKB-CPT1BH3BT56 60 aa13.61□□□□□ -0.23
SOD1-203ENST00000470944 MT2AP02795 61 aa13.61□□□□□ -0.23
SOD1-203ENST00000470944 COA5Q86WW8 74 aa13.6□□□□□ -0.23
SOD1-203ENST00000470944 MT1FP04733 61 aa13.53□□□□□ -0.24
SOD1-203ENST00000470944 KRTAP10-10P60014 251 aa13.44□□□□□ -0.26
SOD1-203ENST00000470944 SPTSSBQ8NFR3 76 aa13.43□□□□□ -0.26
SOD1-203ENST00000470944 Q1T7F1 81 aa13.42□□□□□ -0.26
SOD1-203ENST00000470944 H0YAA0 97 aa13.36□□□□□ -0.27
SOD1-203ENST00000470944 V9GYY9 64 aa13.34□□□□□ -0.27
SOD1-203ENST00000470944 ADM2Q7Z4H4 148 aa13.32□□□□□ -0.28
SOD1-203ENST00000470944 KRTAP9-3Q9BYQ3 159 aa13.25□□□□□ -0.29
SOD1-203ENST00000470944 KRTAP3-2Q9BYR7 98 aa13.23□□□□□ -0.29
SOD1-203ENST00000470944 P0C880 135 aa13.19□□□□□ -0.3
SOD1-203ENST00000470944 LCE2DQ5TA82 110 aaPredicted RBP13.15□□□□□ -0.3
SOD1-203ENST00000470944 LINC01558Q9Y6Z2 57 aa13.07□□□□□ -0.32
SOD1-203ENST00000470944 PSPHP1O15172 72 aa13.05□□□□□ -0.32
SOD1-203ENST00000470944 KRTAP9-2Q9BYQ4 174 aa13.05□□□□□ -0.32
SOD1-203ENST00000470944 KRTAP19-1Q8IUB9 90 aa13.04□□□□□ -0.32
SOD1-203ENST00000470944 LCE2BO14633 110 aa13.01□□□□□ -0.33
SOD1-203ENST00000470944 CRIPTQ9P021 101 aa13□□□□□ -0.33
SOD1-203ENST00000470944 Q5VV11 94 aa12.99□□□□□ -0.33
SOD1-203ENST00000470944 SVIPQ8NHG7 77 aa12.99□□□□□ -0.33
SOD1-203ENST00000470944 PRR15LQ9BU68 103 aa12.98□□□□□ -0.33
SOD1-203ENST00000470944 SPRR2GQ9BYE4 73 aa12.96□□□□□ -0.33
SOD1-203ENST00000470944 SEC61GP60059 68 aa12.92□□□□□ -0.34
SOD1-203ENST00000470944 PRO0628Q9UI54 55 aa12.91□□□□□ -0.34
SOD1-203ENST00000470944 BRK1Q8WUW1 75 aa12.88□□□□□ -0.35
SOD1-203ENST00000470944 USH2AO75445 5202 aa12.88□□□□□ -0.35
SOD1-203ENST00000470944 R4GN34 69 aa12.87□□□□□ -0.35
SOD1-203ENST00000470944 A0A1B0GU69 56 aa12.85□□□□□ -0.35
SOD1-203ENST00000470944 M0QZ58 72 aa12.84□□□□□ -0.35
SOD1-203ENST00000470944 FSIP2Q5CZC0 6907 aa12.81□□□□□ -0.36
SOD1-203ENST00000470944 KRTAP19-8Q3LI54 63 aa12.73□□□□□ -0.37
SOD1-203ENST00000470944 KRTAP13-4Q3LI77 160 aa12.72□□□□□ -0.37
SOD1-203ENST00000470944 A0A1B0GU33 70 aa12.68□□□□□ -0.38
SOD1-203ENST00000470944 A6NED7 52 aa12.68□□□□□ -0.38
SOD1-203ENST00000470944 MT1BP07438 61 aa12.65□□□□□ -0.38
SOD1-203ENST00000470944 LINC01554Q52M75 96 aa12.64□□□□□ -0.39
SOD1-203ENST00000470944 SSPOA2VEC9 5147 aa12.6□□□□□ -0.39
SOD1-203ENST00000470944 CDC42SE1Q9NRR8 79 aa12.58□□□□□ -0.4
SOD1-203ENST00000470944 SPATA8Q6RVD6 105 aa12.57□□□□□ -0.4
SOD1-203ENST00000470944 A8MU10 97 aa12.48□□□□□ -0.41
SOD1-203ENST00000470944 CRCT1Q9UGL9 99 aa12.46□□□□□ -0.41
SOD1-203ENST00000470944 A0A0D9SG42 100 aa12.4□□□□□ -0.43
SOD1-203ENST00000470944 UQCR11O14957 56 aa12.4□□□□□ -0.43
SOD1-203ENST00000470944 PLAC4Q8WY50 150 aa12.34□□□□□ -0.43
SOD1-203ENST00000470944 KRTAP19-6Q3LI70 58 aa12.33□□□□□ -0.44
SOD1-203ENST00000470944 A6NN06 94 aa12.31□□□□□ -0.44
SOD1-203ENST00000470944 MIR22HGQ0VDD5 57 aa12.28□□□□□ -0.44
SOD1-203ENST00000470944 KRTAP9-6A0A140TA67 174 aa12.27□□□□□ -0.45
SOD1-203ENST00000470944 PMAIP1Q13794 54 aa12.21□□□□□ -0.45
SOD1-203ENST00000470944 KRTAP12-1P59990 96 aa12.16□□□□□ -0.46
SOD1-203ENST00000470944 FCGBPQ9Y6R7 5405 aaPredicted RBP12.15□□□□□ -0.46
SOD1-203ENST00000470944 SPINT4Q6UDR6 99 aa12.13□□□□□ -0.47
SOD1-203ENST00000470944 KRTAP10-5P60370 271 aa12.12□□□□□ -0.47
SOD1-203ENST00000470944 KRTAP12-2P59991 146 aa12.11□□□□□ -0.47
SOD1-203ENST00000470944 MT1XP80297 61 aa12.09□□□□□ -0.47
SOD1-203ENST00000470944 CAMK2N1Q7Z7J9 78 aa11.97□□□□□ -0.49
SOD1-203ENST00000470944 PRO2289Q9P1D8 64 aa11.95□□□□□ -0.5
SOD1-203ENST00000470944 KTN1-AS1Q86SY8 53 aa11.89□□□□□ -0.51
SOD1-203ENST00000470944 K7ERS5 55 aa11.65□□□□□ -0.54
SOD1-203ENST00000470944 MACF1Q9UPN3 7388 aaKnown RBP11.62□□□□□ -0.55
SOD1-203ENST00000470944 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.58□□□□□ -0.56
SOD1-203ENST00000470944 KRTAP10-7P60409 375 aaPredicted RBP11.58□□□□□ -0.56
SOD1-203ENST00000470944 C10orf95Q9H7T3 257 aa11.56□□□□□ -0.56
SOD1-203ENST00000470944 KRTAP10-12P60413 245 aa11.46□□□□□ -0.58
SOD1-203ENST00000470944 KMT2DO14686 5537 aa11.46□□□□□ -0.58
SOD1-203ENST00000470944 SYNE2Q8WXH0 6885 aaKnown RBP11.39□□□□□ -0.59
SOD1-203ENST00000470944 PRAC1Q96KF2 57 aa11.35□□□□□ -0.59
SOD1-203ENST00000470944 KRTAP4-8A0A0G2JLE6 195 aa11.33□□□□□ -0.6
SOD1-203ENST00000470944 KRTAP4-8Q9BYQ9 185 aa11.33□□□□□ -0.6
SOD1-203ENST00000470944 TNP1P09430 55 aa11.26□□□□□ -0.61
SOD1-203ENST00000470944 ROMO1P60602 79 aa11.25□□□□□ -0.61
SOD1-203ENST00000470944 KRTAP9-7A8MTY7 169 aa11.15□□□□□ -0.63
SOD1-203ENST00000470944 KRTAP8-1Q8IUC2 63 aa11.13□□□□□ -0.63
SOD1-203ENST00000470944 KRTAP6-3Q3LI67 103 aa11.08□□□□□ -0.64
SOD1-203ENST00000470944 KRTAP25-1Q3LHN0 102 aa11.06□□□□□ -0.64
SOD1-203ENST00000470944 LCE3AQ5TA76 89 aa10.98□□□□□ -0.65
SOD1-203ENST00000470944 KRTAP5-9P26371 169 aa10.98□□□□□ -0.65
SOD1-203ENST00000470944 SPRR2FQ96RM1 72 aa10.9□□□□□ -0.66
SOD1-203ENST00000470944 MUC12Q9UKN1 5478 aa10.84□□□□□ -0.67
SOD1-203ENST00000470944 KRTAP19-7Q3SYF9 63 aa10.8□□□□□ -0.68
SOD1-203ENST00000470944 KRTAP19-5Q3LI72 72 aa10.77□□□□□ -0.69
SOD1-203ENST00000470944 MDN1Q9NU22 5596 aa10.7□□□□□ -0.7
SOD1-203ENST00000470944 KRTAP23-1A1A580 65 aa10.66□□□□□ -0.7
SOD1-203ENST00000470944 MT1EP04732 61 aa10.64□□□□□ -0.71
SOD1-203ENST00000470944 KRTAP12-3P60328 96 aa10.53□□□□□ -0.72
SOD1-203ENST00000470944 LCE1AQ5T7P2 110 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms